{ "type": "genome", "identifier": "GCF_016743775.1", "organism": "Microvirga aerilata", "title": "Microvirga aerilata", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Seoul Women's University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016743775.1", "bioproject": "PRJNA224116", "biosample": "SAMN17303466", "wgs_master": "JAEQMY000000000.1", "refseq_category": "reference genome", "taxid": "670292", "species_taxid": "670292", "organism_name": "Microvirga aerilata", "infraspecific_name": "strain=5420S-16", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/01/19", "asm_name": "ASM1674377v1", "asm_submitter": "Seoul Women's University", "gbrs_paired_asm": "GCA_016743775.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/743/775/GCF_016743775.1_ASM1674377v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6832235", "genome_size_ungapped": "6832235", "gc_percent": "62.500000", "replicon_count": "0", "scaffold_count": "382", "contig_count": "382", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016743775.1-RS_2024_09_29", "annotation_date": "2024-09-29", "total_gene_count": "6679", "protein_coding_gene_count": "6359", "non_coding_gene_count": "64", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-01-19", "dateModified": "2021-01-19", "datePublished": "2021-01-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Microvirga aerilata" ], "sample_taxid": [ "670292" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea: Suwon" ], 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"GCA_002741015.1", "taxid": 1882682, "species_taxid": 1882682, "relation_to_type": "type", "validated": true, "ani": 83.8042, "matched_fragments": 1229, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga zambiensis", "strain": "strain=WSM3693", "accession": "GCA_016735695.1", "taxid": 1402137, "species_taxid": 1402137, "relation_to_type": "type", "validated": true, "ani": 83.7378, "matched_fragments": 1065, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga calopogonii", "strain": "strain=CCBAU 65841", "accession": "GCA_003347665.1", "taxid": 2078013, "species_taxid": 2078013, "relation_to_type": "type", "validated": true, "ani": 83.6515, "matched_fragments": 1105, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga roseola", "strain": "strain=SM2", "accession": "GCA_020866965.1", "taxid": 2883126, "species_taxid": 2883126, "relation_to_type": "type", "validated": true, "ani": 82.9175, "matched_fragments": 923, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga lenta", "strain": "strain=SM9", "accession": "GCA_020532555.1", "taxid": 2881337, "species_taxid": 2881337, "relation_to_type": "type", "validated": true, "ani": 82.6567, "matched_fragments": 859, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga pakistanensis", "strain": "strain=NCCP-1258", "accession": "GCA_004458765.1", "taxid": 1682650, "species_taxid": 1682650, "relation_to_type": "type", "validated": true, "ani": 82.5661, "matched_fragments": 950, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga vignae", "strain": "strain=BR3299", "accession": "GCA_001017175.1", "taxid": 1225564, "species_taxid": 1225564, "relation_to_type": "type", "validated": true, "ani": 82.1125, "matched_fragments": 915, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga makkahensis", "strain": "strain=KCTC 23863", "accession": "GCA_009830105.1", "taxid": 1128670, "species_taxid": 1128670, "relation_to_type": "type", "validated": true, "ani": 81.9483, "matched_fragments": 919, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga rosea", "strain": "strain=CGMCC1.16488", "accession": "GCA_020595095.1", "taxid": 2715425, "species_taxid": 2715425, "relation_to_type": "type", "validated": true, "ani": 79.8704, "matched_fragments": 676, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinarimonas soli", "strain": "strain=BN140002", "accession": "GCA_008386575.1", "taxid": 1638099, "species_taxid": 1638099, "relation_to_type": "type", "validated": true, "ani": 79.1632, "matched_fragments": 559, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium terricola", "strain": "strain=17Sr1-39", "accession": "GCA_006151805.1", "taxid": 2583531, "species_taxid": 2583531, "relation_to_type": "type", "validated": true, "ani": 78.5412, "matched_fragments": 497, "total_fragments": 2095, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_016743775.1", "gtdb_species": "s__Microvirga aerilata", "ani": 100.0, "matched_fragments": 2082, "total_fragments": 2095, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Microvirga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": 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