{
    "type": "genome",
    "identifier": "GCF_016863275.1",
    "organism": "Planotetraspora mira",
    "title": "Planotetraspora mira",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Biological Resource Center, National Institute of Technology and Evaluation (NBRC)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_016863275.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00232352",
        "wgs_master": "BOOO00000000.1",
        "refseq_category": "reference genome",
        "taxid": "58121",
        "species_taxid": "58121",
        "organism_name": "Planotetraspora mira",
        "infraspecific_name": "strain=NBRC 15435",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/01/29",
        "asm_name": "ASM1686327v1",
        "asm_submitter": "Biological Resource Center, National Institute of Technology and Evaluation (NBRC)",
        "gbrs_paired_asm": "GCA_016863275.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/863/275/GCF_016863275.1_ASM1686327v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "9027692",
        "genome_size_ungapped": "9027692",
        "gc_percent": "69.500000",
        "replicon_count": "0",
        "scaffold_count": "101",
        "contig_count": "101",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_016863275.1-RS_2024_09_02",
        "annotation_date": "2024-09-02",
        "total_gene_count": "8394",
        "protein_coding_gene_count": "8240",
        "non_coding_gene_count": "68",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-01-29",
    "dateModified": "2021-01-29",
    "datePublished": "2021-01-29",
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        "sample_count": 1,
        "sample_organism": [
            "Planotetraspora mira"
        ],
        "sample_taxid": [
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        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Sichuan, Wolung"
        ],
        "sample_host_location_id": [],
        "data_size": "2.461 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
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        "Number of Sequences": "101",
        "Longest Sequences (bp)": "570654",
        "N50 (bp)": "235359",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "69.3",
        "Number of CDSs": "8439",
        "Average Protein Length": "314.1",
        "Coding Ratio (%)": "88.1",
        "Number of rRNAs": "2",
        "Number of tRNAs": "69",
        "Number of CRISPRs": "15"
    },
    "has_analysis": true,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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                "status": "below_threshold"
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                "validated": true,
                "ani": 90.2362,
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                "total_fragments": 2965,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Planotetraspora thailandica",
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                "taxid": 487172,
                "species_taxid": 487172,
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                "matched_fragments": 2015,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microbispora oryzae",
                "strain": "strain=RL4-1S",
                "accession": "GCA_017896165.1",
                "taxid": 2806554,
                "species_taxid": 2806554,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphaerimonospora thailandensis",
                "strain": "strain=NBRC 107569",
                "accession": "GCA_016863115.1",
                "taxid": 795644,
                "species_taxid": 795644,
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                "validated": true,
                "ani": 81.3041,
                "matched_fragments": 1020,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphaerisporangium corydalis",
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                "accession": "GCA_025506355.1",
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                "species_taxid": 1441875,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonomuraea rhizosphaerae",
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                "accession": "GCA_019396405.1",
                "taxid": 2665663,
                "species_taxid": 2665663,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nonomuraea aurantiaca",
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                "accession": "GCA_020215705.1",
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                "species_taxid": 2878562,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            }
        ],
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        "gtdb_result": [
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                "accession": "GCF_016863275.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Planotetraspora",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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                "mean_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
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        "sporulation": 1.0,
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        "range_salinity": null,
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        "mesophilic_range_tmp": null,
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    "_genome_taxon": [
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        "mira"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}