{ "type": "genome", "identifier": "GCF_016888335.1", "organism": "Janibacter endophyticus", "title": "Janibacter endophyticus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "The Institute of Microbiology of the Chinese Academy of Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016888335.1", "bioproject": "PRJNA224116", "biosample": "SAMN17600866", "wgs_master": "JAFEJG000000000.1", "refseq_category": "reference genome", "taxid": "2806261", "species_taxid": "2806261", "organism_name": "Janibacter endophyticus", "infraspecific_name": "strain=YIM B02568", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/02/14", "asm_name": "ASM1688833v1", "asm_submitter": "The Institute of Microbiology of the Chinese Academy of Sciences", "gbrs_paired_asm": "GCA_016888335.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/888/335/GCF_016888335.1_ASM1688833v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2975194", "genome_size_ungapped": "2975099", "gc_percent": "71.500000", "replicon_count": "0", "scaffold_count": "5", "contig_count": "5", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016888335.1-RS_2024_08_29", "annotation_date": "2024-08-29", "total_gene_count": "2869", "protein_coding_gene_count": "2797", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-02-14", "dateModified": "2021-02-14", "datePublished": "2021-02-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Janibacter endophyticus" ], "sample_taxid": [ "2806261" ], "sample_host_organism": [ "Paris polyphylla 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Janibacter massiliensis", "strain": "strain=Marseille-P4121", "accession": "GCA_900289115.1", "taxid": 2058291, "species_taxid": 2058291, "relation_to_type": "type", "validated": true, "ani": 80.4177, "matched_fragments": 469, "total_fragments": 990, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phycicoccus mangrovi", "strain": "strain=KQZ13P-1", "accession": "GCA_018729305.1", "taxid": 2840470, "species_taxid": 2840470, "relation_to_type": "type", "validated": true, "ani": 80.3974, "matched_fragments": 539, "total_fragments": 990, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phycicoccus jejuensis", "strain": "strain=NRRL B-24460", "accession": "GCA_000720925.1", "taxid": 367299, "species_taxid": 367299, "relation_to_type": "type", "validated": true, "ani": 80.3326, "matched_fragments": 534, "total_fragments": 990, "ani_threshold": 95, "status": "below_threshold" 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