{ "tc_result": [ { "organism_name": "Microbacterium keratanolyticum", "strain": "strain=DSM 8606", "accession": "GCA_016907255.1", "taxid": 67574, "species_taxid": 67574, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1021, "total_fragments": 1022, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbacterium commune", "strain": "strain=Re1", "accession": "GCA_014836945.1", "taxid": 2762219, "species_taxid": 2762219, "relation_to_type": "type", "validated": true, "ani": 80.9733, "matched_fragments": 484, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium phyllosphaerae", "strain": "strain=DSM 13468", "accession": "GCA_017876435.1", "taxid": 124798, "species_taxid": 124798, "relation_to_type": "type", "validated": true, "ani": 80.8628, "matched_fragments": 545, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium paraoxydans", "strain": "strain=NBRC 103076", "accession": "GCA_001552495.1", "taxid": 199592, "species_taxid": 199592, "relation_to_type": "suspected-type", "validated": true, "ani": 80.7928, "matched_fragments": 479, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium paraoxydans", "strain": "strain=DSM 15019", "accession": "GCA_900105335.1", "taxid": 199592, "species_taxid": 199592, "relation_to_type": "suspected-type", "validated": true, "ani": 80.7894, "matched_fragments": 521, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium algeriense", "strain": "strain=G1", "accession": "GCA_008868005.1", "taxid": 2615184, "species_taxid": 2615184, "relation_to_type": "type", "validated": true, "ani": 80.7486, "matched_fragments": 536, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium liquefaciens", "strain": "strain=NBRC 15037", "accession": "GCA_006539765.1", "taxid": 33918, "species_taxid": 33918, "relation_to_type": "type", "validated": true, "ani": 80.7109, "matched_fragments": 516, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium foliorum", "strain": "strain=NRRL B-24224", "accession": "GCA_003367705.1", "taxid": 104336, "species_taxid": 104336, "relation_to_type": "suspected-type", "validated": true, "ani": 80.6576, "matched_fragments": 515, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oxydans", "strain": "strain=NBRC 15586", "accession": "GCA_006540085.1", "taxid": 82380, "species_taxid": 82380, "relation_to_type": "suspected-type", "validated": true, "ani": 80.652, "matched_fragments": 517, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oxydans", "strain": "strain=DSM 20578", "accession": "GCA_008868025.1", "taxid": 82380, "species_taxid": 82380, "relation_to_type": "suspected-type", "validated": true, "ani": 80.6516, "matched_fragments": 520, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hydrocarbonoxydans", "strain": "strain=NBRC 103074", "accession": "GCA_001552455.1", "taxid": 273678, "species_taxid": 273678, "relation_to_type": "suspected-type", "validated": true, "ani": 80.5695, "matched_fragments": 519, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hydrocarbonoxydans", "strain": "strain=DSM 16089", "accession": "GCA_900105205.1", "taxid": 273678, "species_taxid": 273678, "relation_to_type": "suspected-type", "validated": true, "ani": 80.5503, "matched_fragments": 541, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium bovistercoris", "strain": "strain=NEAU-LLE", "accession": "GCA_003387575.1", "taxid": 2293570, "species_taxid": 2293570, "relation_to_type": "type", "validated": true, "ani": 80.5425, "matched_fragments": 510, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saperdae", "strain": "strain=DSM 20169", "accession": "GCA_006716345.1", "taxid": 69368, "species_taxid": 69368, "relation_to_type": "type", "validated": true, "ani": 80.5062, "matched_fragments": 545, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium saperdae", "strain": "strain=JCM 1352", "accession": "GCA_014646775.1", "taxid": 69368, "species_taxid": 69368, "relation_to_type": "type", "validated": true, "ani": 80.3905, "matched_fragments": 548, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ginsengiterrae", "strain": "strain=JCM 15516", "accession": "GCA_015278215.1", "taxid": 546115, "species_taxid": 546115, "relation_to_type": "type", "validated": true, "ani": 80.2414, "matched_fragments": 459, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium resistens", "strain": "strain=NBRC 103078", "accession": "GCA_001552355.1", "taxid": 156977, "species_taxid": 156977, "relation_to_type": "type", "validated": true, "ani": 80.2031, "matched_fragments": 468, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium gallinarum", "strain": "strain=Sa1CUA4", "accession": "GCA_014837165.1", "taxid": 2762209, "species_taxid": 2762209, "relation_to_type": "type", "validated": true, "ani": 79.6854, "matched_fragments": 431, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium trichothecenolyticum", "strain": "strain=DSM 8608", "accession": "GCA_000956465.1", "taxid": 69370, "species_taxid": 69370, "relation_to_type": "type", "validated": true, "ani": 79.5535, "matched_fragments": 425, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hominis", "strain": "strain=LCDC 84-0209", "accession": "GCA_001553805.1", "taxid": 162426, "species_taxid": 162426, "relation_to_type": "type", "validated": true, "ani": 79.5366, "matched_fragments": 388, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hibisci", "strain": "strain=CCTCC AB 2016180", "accession": "GCA_015278255.1", "taxid": 2036000, "species_taxid": 2036000, "relation_to_type": "type", "validated": true, "ani": 79.5299, "matched_fragments": 418, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium hominis", "strain": "strain=NBRC 15708", "accession": "GCA_001592125.1", "taxid": 162426, "species_taxid": 162426, "relation_to_type": "type", "validated": true, "ani": 79.503, "matched_fragments": 388, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oryzae", "strain": "strain=MB-10", "accession": "GCA_009735645.1", "taxid": 743009, "species_taxid": 743009, "relation_to_type": "type", "validated": true, "ani": 79.4711, "matched_fragments": 380, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium atlanticum", "strain": "strain=WY121", "accession": "GCA_015277815.1", "taxid": 2782168, "species_taxid": 2782168, "relation_to_type": "type", "validated": true, "ani": 79.3519, "matched_fragments": 403, "total_fragments": 1022, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_016907255.1", "gtdb_species": "s__Microbacterium keratanolyticum", "ani": 100.0, "matched_fragments": 1022, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_017405925.1", "gtdb_species": "s__Microbacterium sp017405925", "ani": 81.2918, "matched_fragments": 415, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001866135.1", "gtdb_species": "s__Microbacterium sp001866135", "ani": 80.8509, "matched_fragments": 524, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.261, "mean_intra_species_ani": "97.41", "min_intra_species_ani": "95.65", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003075395.1", "gtdb_species": "s__Microbacterium sp003075395", "ani": 80.8373, "matched_fragments": 575, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_019056515.1", "gtdb_species": "s__Microbacterium sp001595495", "ani": 80.8206, "matched_fragments": 545, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.3631, "mean_intra_species_ani": "98.29", "min_intra_species_ani": "96.93", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.85", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCF_004794315.1", "gtdb_species": "s__Microbacterium sp004794315", "ani": 80.8202, "matched_fragments": 542, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.96", "min_intra_species_ani": "98.84", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_001049495.1", "gtdb_species": "s__Microbacterium sp001049495", "ani": 80.7617, "matched_fragments": 515, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_008868125.1", "gtdb_species": "s__Microbacterium maritypicum", "ani": 80.7319, "matched_fragments": 549, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.89", "min_intra_species_ani": "96.90", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.86", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_000956525.1", "gtdb_species": "s__Microbacterium oxydans_A", "ani": 80.7019, "matched_fragments": 552, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_904066215.1", "gtdb_species": "s__Microbacterium sp002456035", "ani": 80.6479, "matched_fragments": 527, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.68", "min_intra_species_ani": "98.64", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004794515.1", "gtdb_species": "s__Microbacterium sp004794515", "ani": 80.6253, "matched_fragments": 553, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017306305.1", "gtdb_species": "s__Microbacterium sp017306305", "ani": 80.5676, "matched_fragments": 518, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.93", "min_intra_species_ani": "98.76", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_017939615.1", "gtdb_species": "s__Microbacterium sp017939615", "ani": 80.5501, "matched_fragments": 541, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003610275.1", "gtdb_species": "s__Microbacterium ginsengiterrae_A", "ani": 80.5485, "matched_fragments": 508, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002257455.1", "gtdb_species": "s__Microbacterium sp002257455", "ani": 80.5372, "matched_fragments": 458, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001513675.1", "gtdb_species": "s__Microbacterium sp001513675", "ani": 80.5287, "matched_fragments": 513, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000967865.1", "gtdb_species": "s__Microbacterium sp000967865", "ani": 80.5255, "matched_fragments": 522, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002872075.1", "gtdb_species": "s__Microbacterium kitamiense", "ani": 80.5123, "matched_fragments": 538, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000956545.1", "gtdb_species": "s__Microbacterium azadirachtae", "ani": 80.4558, "matched_fragments": 507, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.29", "min_intra_species_ani": "96.06", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.89", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000956505.1", "gtdb_species": "s__Microbacterium azadirachtae_A", "ani": 80.3806, "matched_fragments": 517, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.57", "min_intra_species_ani": "96.57", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_018268515.1", "gtdb_species": "s__Microbacterium sp018268515", "ani": 80.296, "matched_fragments": 466, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018268435.1", "gtdb_species": "s__Microbacterium sp018268435", "ani": 80.2504, "matched_fragments": 449, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017744855.1", "gtdb_species": "s__Microbacterium sp017744855", "ani": 80.1944, "matched_fragments": 432, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018268455.1", "gtdb_species": "s__Microbacterium sp018268455", "ani": 80.1898, "matched_fragments": 463, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900155915.1", "gtdb_species": "s__Microbacterium sp900155915", "ani": 79.6595, "matched_fragments": 392, "total_fragments": 1022, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }