{ "type": "genome", "identifier": "GCF_016908295.1", "organism": "Thalassobacillus pellis", "title": "Thalassobacillus pellis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_016908295.1", "bioproject": "PRJNA224116", "biosample": "SAMN17619995", "wgs_master": "JAFBDO000000000.1", "refseq_category": "reference genome", "taxid": "748008", "species_taxid": "748008", "organism_name": "Thalassobacillus pellis", "infraspecific_name": "strain=DSM 22784", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/02/19", "asm_name": "ASM1690829v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_016908295.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/016/908/295/GCF_016908295.1_ASM1690829v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4047112", "genome_size_ungapped": "4047112", "gc_percent": "42.500000", "replicon_count": "0", "scaffold_count": "16", "contig_count": "16", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_016908295.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "4064", "protein_coding_gene_count": "3965", "non_coding_gene_count": "75", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-02-19", "dateModified": "2021-02-19", "datePublished": "2021-02-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Thalassobacillus pellis" ], "sample_taxid": [ "748008" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "1.153 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4047112", "Number of Sequences": "16", "Longest Sequences (bp)": "1227675", "N50 (bp)": "963153", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "42.6", "Number of CDSs": "4001", "Average Protein Length": "284.7", "Coding Ratio (%)": "84.4", "Number of rRNAs": "2", "Number of tRNAs": "59", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Thalassobacillus pellis", "strain": "strain=DSM 22784", "accession": "GCA_016908295.1", "taxid": 748008, "species_taxid": 748008, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1341, 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"below_threshold" }, { "organism_name": "Halobacillus faecis", "strain": "strain=NBRC 103569", "accession": "GCA_007991335.1", "taxid": 360184, "species_taxid": 360184, "relation_to_type": "type", "validated": true, "ani": 77.4634, "matched_fragments": 92, "total_fragments": 1341, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halobacillus halophilus", "strain": "strain=type strain: DSM 2266", "accession": "GCA_000284515.1", "taxid": 1570, "species_taxid": 1570, "relation_to_type": "type", "validated": true, "ani": 77.4597, "matched_fragments": 111, "total_fragments": 1341, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halobacillus salinus", "strain": "strain=HSL-3", "accession": "GCA_004684905.1", "taxid": 192814, "species_taxid": 192814, "relation_to_type": "type", "validated": true, "ani": 77.3997, "matched_fragments": 83, "total_fragments": 1341, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halobacillus 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