# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00020	sequence1:1223..1384(+)	internal_stop_codon	1382..1384(+)		WP_010888615.1	thioredoxin-disulfide reductase	94.3	15.4	58.0
MGA_3	LOCUS_00030	sequence1:1397..2149(+)	internal_stop_codon	1382..1384(+)		WP_011182961.1	thioredoxin-disulfide reductase	98.8	78.8	38.7
MGA_5	LOCUS_00050	sequence1:3283..3687(+)	internal_stop_codon	3685..3687(+)		WP_205842899.1	DUF31 family protein	99.3	19.4	29.9
MGA_8	LOCUS_00080	sequence1:4333..4509(+)	internal_stop_codon	4192..4194(+)		WP_020862862.1	DUF31 family protein	96.6	6.7	59.3
MGA_27	LOCUS_00270	sequence1:13081..14346(+)	internal_stop_codon	14344..14346(+),14533..14535(+)		WP_011166795.1	ATP F0F1 synthase subunit alpha	98.1	79.8	54.7
MGA_30	LOCUS_00300	sequence1:15081..15980(+)	internal_stop_codon	14967..14969(+)		WP_011166794.1	F0F1 ATP synthase subunit beta	99.7	64.9	66.4
MGA_33	LOCUS_00330	sequence1:16943..17584(+)	internal_stop_codon	17672..17674(+),17786..17788(+),17582..17584(+)		WP_011166468.1	DUF31 family protein	97.2	33.3	40.4
MGA_34	LOCUS_00340	sequence1:18073..18273(+)	frameshift,internal_stop_codon	17918..17920(+)	18031	WP_011166468.1	DUF31 family protein	97.0	10.1	47.8
MGA_37	LOCUS_00370	sequence1:19666..19854(-)	internal_stop_codon	19909..19911(-),19990..19992(-),19915..19917(-)		WP_003106436.1	uracil-DNA glycosylase	100.0	26.0	46.8
MGA_38	LOCUS_00380	sequence1:19990..20307(-)	internal_stop_codon	19909..19911(-),19990..19992(-),19915..19917(-)		WP_002851931.1	uracil-DNA glycosylase	83.8	40.3	47.9
MGA_40	LOCUS_00400	sequence1:20609..21136(-)	internal_stop_codon	20609..20611(-)		WP_011166634.1	methionyl-tRNA formyltransferase	96.0	53.6	48.2
MGA_44	LOCUS_00440	sequence1:22739..23290(+)	internal_stop_codon	23288..23290(+)		WP_011183494.1	L-lactate dehydrogenase	98.9	56.5	43.1
MGA_45	LOCUS_00450	sequence1:23315..23620(+)	internal_stop_codon	23618..23620(+),23288..23290(+)		WP_005479617.1	L-lactate dehydrogenase	85.1	27.1	39.5
MGA_53	LOCUS_00530	sequence1:27084..27476(+)	internal_stop_codon	27474..27476(+)		WP_010874491.1	ABC transporter ATP-binding protein	85.4	18.9	60.4
MGA_56	LOCUS_00560	sequence1:28452..28802(+)	internal_stop_codon	28800..28802(+)		WP_010874491.1	ABC transporter ATP-binding protein	75.0	14.8	63.2
MGA_57	LOCUS_00570	sequence1:28869..29333(+)	internal_stop_codon	28800..28802(+)		WP_010874491.1	ABC transporter ATP-binding protein	100.0	26.5	45.6
MGA_59	LOCUS_00590	sequence1:29944..30366(+)	internal_stop_codon	29719..29721(+),29866..29868(+),29839..29841(+),29704..29706(+)		WP_010874492.1	sugar ABC transporter permease	75.0	31.9	50.5
MGA_61	LOCUS_00610	sequence1:30845..31015(+)	internal_stop_codon	31061..31063(+),30722..30724(+),30839..30841(+),31013..31015(+),31118..31120(+),31046..31048(+),30743..30745(+)		WP_010874493.1	carbohydrate ABC transporter permease	98.2	17.2	63.6
MGA_66	LOCUS_00660	sequence1:32978..33766(+)	internal_stop_codon	33764..33766(+)		WP_010874481.1	heat-inducible transcriptional repressor HrcA	100.0	75.5	33.8
MGA_69	LOCUS_00690	sequence1:35727..35879(+)	internal_stop_codon	35877..35879(+)		WP_011166830.1	DUF4011 domain-containing protein	94.0	7.3	74.5
MGA_72	LOCUS_00720	sequence1:37086..37784(+)	internal_stop_codon	37782..37784(+)		WP_008363296.1	DUF4011 domain-containing protein	93.1	14.2	32.4
MGA_73	LOCUS_00730	sequence1:38229..38672(+)	internal_stop_codon	38688..38690(+),38700..38702(+),38670..38672(+)		WP_008363296.1	DUF4011 domain-containing protein	98.6	9.4	40.4
MGA_75	LOCUS_00750	sequence1:39922..40431(+)	internal_stop_codon	39850..39852(+),40429..40431(+),39736..39738(+)		WP_011088401.1	alcohol dehydrogenase AdhP	99.4	47.5	46.4
MGA_76	LOCUS_00760	sequence1:40838..41452(+)	internal_stop_codon	41471..41473(+),41450..41452(+)		WP_011183314.1	molecular chaperone DnaK	100.0	34.3	70.6
MGA_77	LOCUS_00770	sequence1:41474..42499(+)	internal_stop_codon	41471..41473(+),42497..42499(+),41450..41452(+)		WP_011183314.1	molecular chaperone DnaK	95.9	55.2	58.4
MGA_79	LOCUS_00790	sequence1:43350..43631(+)	internal_stop_codon	43260..43262(+)		WP_011254431.1	Cof-type HAD-IIB family hydrolase	83.9	28.0	43.6
MGA_84	LOCUS_00840	sequence1:45701..46201(-)	internal_stop_codon	46268..46270(-)		WP_011013856.1	DUF262 domain-containing protein	92.2	20.2	29.3
MGA_86	LOCUS_00860	sequence1:46655..46873(-)	internal_stop_codon	47093..47095(-),46655..46657(-)		WP_000077187.1	phosphopentomutase	87.5	15.6	52.4
MGA_87	LOCUS_00870	sequence1:47093..47233(-)	internal_stop_codon	47093..47095(-),47399..47401(-),47306..47308(-)		WP_001046079.1	phosphopentomutase	87.0	10.2	62.5
MGA_89	LOCUS_00890	sequence1:47741..48655(+)	internal_stop_codon	48653..48655(+),48713..48715(+),48842..48844(+)		WP_011183072.1	pyruvate kinase	98.7	62.8	52.7
MGA_103	LOCUS_01030	sequence1:55385..55693(+)	internal_stop_codon	55691..55693(+)		WP_011166360.1	30S ribosomal protein S7	98.0	64.5	70.0
MGA_104	LOCUS_01040	sequence1:55730..55852(+)	internal_stop_codon	55691..55693(+)		WP_011166360.1	30S ribosomal protein S7	100.0	25.8	82.5
MGA_105	LOCUS_01050	sequence1:55876..56031(+)	internal_stop_codon	56089..56091(+),56029..56031(+),56233..56235(+)		WP_011183519.1	elongation factor G	100.0	7.4	84.3
MGA_106	LOCUS_01060	sequence1:56284..57111(+)	internal_stop_codon	56089..56091(+),56029..56031(+),56233..56235(+)		WP_011183519.1	elongation factor G	98.5	39.3	65.6
MGA_107	LOCUS_01070	sequence1:57147..57476(+)	internal_stop_codon	57474..57476(+)		WP_011183519.1	elongation factor G	100.0	15.8	74.3
MGA_108	LOCUS_01080	sequence1:57588..57959(+)	internal_stop_codon	57474..57476(+),57957..57959(+)		WP_010874584.1	elongation factor G	100.0	17.7	68.3
MGA_120	LOCUS_01200	sequence1:64922..65392(+)	partial			WP_011016602.1	phosphatidylinositol-4-phosphate 5-kinase	87.8	36.6	32.8
MGA_121	LOCUS_01210	sequence1:65672..66289(+)	partial			WP_010880420.1	tRNA pseudouridine(55) synthase TruB	66.3	47.4	36.0
MGA_124	LOCUS_01240	sequence1:67203..67964(+)	partial			WP_011228004.1	riboflavin biosynthesis protein RibF	59.7	52.4	27.9
MGA_132	LOCUS_01320	sequence1:72601..72762(-)	internal_stop_codon	72601..72603(-),73033..73035(-)		WP_011183317.1	AAA family ATPase	100.0	7.5	84.9
MGA_134	LOCUS_01340	sequence1:73279..73935(-)	internal_stop_codon	73279..73281(-),73033..73035(-),73954..73956(-)		WP_000353954.1	ATP-dependent chaperone ClpB	100.0	25.0	60.1
MGA_135	LOCUS_01350	sequence1:73954..74100(-)	internal_stop_codon	73954..73956(-)		WP_011476005.1	ATP-dependent chaperone ClpB	100.0	5.6	77.1
MGA_143	LOCUS_01430	sequence1:77557..77697(-)	internal_stop_codon	77557..77559(-),77851..77853(-),77401..77403(-),77758..77760(-)		WP_012583633.1	glutamate--tRNA ligase	100.0	9.6	78.3
MGA_144	LOCUS_01440	sequence1:78067..78258(-)	internal_stop_codon	78067..78069(-)		WP_010875035.1	glutamate--tRNA ligase	98.4	12.8	75.8
MGA_146	LOCUS_01460	sequence1:78851..79438(-)	internal_stop_codon	79481..79483(-),79631..79633(-)		WP_012583838.1	arginine--tRNA ligase	98.5	36.5	35.8
MGA_147	LOCUS_01470	sequence1:79733..80464(-)	internal_stop_codon	79481..79483(-),79733..79735(-),79631..79633(-)		WP_003227570.1	arginine--tRNA ligase	97.9	43.5	42.1
MGA_156	LOCUS_01560	sequence1:85365..85844(+)	internal_stop_codon	86052..86054(+),85902..85904(+),85842..85844(+)		WP_011182984.1	cysteine--tRNA ligase	97.5	35.8	43.7
MGA_157	LOCUS_01570	sequence1:86076..86486(+)	internal_stop_codon	86052..86054(+),85902..85904(+),85842..85844(+),86484..86486(+)		WP_011182984.1	cysteine--tRNA ligase	98.5	35.4	31.4
MGA_158	LOCUS_01580	sequence1:87101..87253(+)	internal_stop_codon	87026..87028(+),86885..86887(+)		WP_012027787.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	98.0	20.2	57.1
MGA_163	LOCUS_01630	sequence1:88578..88895(+)	internal_stop_codon	88569..88571(+),88335..88337(+)		WP_011167111.1	transcription termination/antitermination protein NusG	99.0	56.3	38.8
MGA_164	LOCUS_01640	sequence1:89100..89528(-)	internal_stop_codon	89100..89102(-)		WP_003643214.1	DUF402 domain-containing protein	79.6	62.6	36.8
MGA_170	LOCUS_01700	sequence1:91675..92001(+)	internal_stop_codon	92152..92154(+),91999..92001(+),92233..92235(+)		WP_004398646.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	89.8	50.2	41.7
MGA_171	LOCUS_01710	sequence1:92396..94018(+)	internal_stop_codon	94016..94018(+)		WP_002288365.1	DNA gyrase subunit A	89.8	58.9	57.7
MGA_172	LOCUS_01720	sequence1:94145..94363(+)	internal_stop_codon	94361..94363(+),94016..94018(+)		WP_010874361.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	100.0	8.5	45.8
MGA_173	LOCUS_01730	sequence1:94514..95005(+)	internal_stop_codon	94361..94363(+)		WP_011962907.1	DNA gyrase subunit A	93.9	17.8	39.7
MGA_175	LOCUS_01750	sequence1:95387..95815(-)	internal_stop_codon	95927..95929(-),95387..95389(-)		WP_002357094.1	phosphoglycerate kinase	99.3	35.3	48.9
MGA_176	LOCUS_01760	sequence1:95927..96355(-)	internal_stop_codon	95927..95929(-)		WP_005902043.1	phosphoglycerate kinase	100.0	34.4	52.1
MGA_178	LOCUS_01780	sequence1:96853..97431(+)	partial			WP_011254229.1	diadenylate cyclase CdaA	66.1	45.7	43.0
MGA_179	LOCUS_01790	sequence1:97451..98320(+)	internal_stop_codon	98318..98320(+)		WP_011183114.1	magnesium transporter	97.2	59.6	38.4
MGA_180	LOCUS_01800	sequence1:98333..98974(+)	internal_stop_codon	98318..98320(+)		WP_010933513.1	magnesium transporter	95.3	36.1	28.6
MGA_183	LOCUS_01830	sequence1:101242..102033(+)	internal_stop_codon	100999..101001(+),102031..102033(+),101161..101163(+)		WP_011182941.1	acetate kinase	98.5	66.2	46.6
MGA_187	LOCUS_01870	sequence1:103227..103478(+)	partial			WP_002669347.1	30S ribosomal protein S18	86.7	71.7	55.6
MGA_188	LOCUS_01880	sequence1:103646..104083(+)	internal_stop_codon	103604..103606(+)		WP_010881182.1	ribosome biogenesis GTP-binding protein YihA/YsxC	97.9	78.1	35.0
MGA_189	LOCUS_01890	sequence1:104688..106109(+)	partial			WP_072710106.1	DHH family phosphoesterase	94.9	68.2	27.7
MGA_191	LOCUS_01910	sequence1:106570..107388(+)	internal_stop_codon	107425..107427(+),107386..107388(+)		WP_010880953.1	replicative DNA helicase	93.4	53.6	32.6
MGA_192	LOCUS_01920	sequence1:107431..107988(+)	internal_stop_codon	107425..107427(+),107386..107388(+)		WP_000375647.1	replicative DNA helicase	95.7	36.5	52.8
MGA_200	LOCUS_02000	sequence1:112875..113225(+)	internal_stop_codon	113223..113225(+),112860..112862(+)		WP_011015666.1	SPFH domain-containing protein	100.0	39.5	56.9
MGA_201	LOCUS_02010	sequence1:113289..113678(+)	internal_stop_codon	113223..113225(+)		WP_010964370.1	SPFH domain-containing protein	100.0	44.7	37.5
MGA_205	LOCUS_02050	sequence1:115665..115955(-)	partial			WP_002455871.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	93.8	64.1	41.8
MGA_206	LOCUS_02060	sequence1:115957..116496(-)	internal_stop_codon	116524..116526(-)		WP_010965037.1	ribulose-phosphate 3-epimerase	100.0	82.4	37.6
MGA_207	LOCUS_02070	sequence1:116601..117212(-)	internal_stop_codon	117312..117314(-)		WP_001161981.1	ribosome small subunit-dependent GTPase A	100.0	68.8	42.2
MGA_208	LOCUS_02080	sequence1:117524..118165(-)	internal_stop_codon	118172..118174(-)		WP_056938256.1	Stk1 family PASTA domain-containing Ser/Thr kinase	88.3	27.8	39.8
MGA_210	LOCUS_02100	sequence1:118426..118599(-)	internal_stop_codon	118681..118683(-),118714..118716(-)		WP_011183117.1	protein phosphatase 2C domain-containing protein	96.5	21.3	47.3
MGA_212	LOCUS_02120	sequence1:118945..119178(-)	internal_stop_codon	118945..118947(-),118681..118683(-),118714..118716(-)		WP_011183117.1	protein phosphatase 2C domain-containing protein	90.9	27.6	50.7
MGA_214	LOCUS_02140	sequence1:119547..119777(-)	internal_stop_codon	119547..119549(-)		WP_003431170.1	guanylate kinase	94.7	35.6	58.1
MGA_215	LOCUS_02150	sequence1:119952..120368(-)	internal_stop_codon	119952..119954(-)		WP_011460510.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	96.4	73.3	39.1
MGA_216	LOCUS_02160	sequence1:120429..120767(+)	internal_stop_codon	120945..120947(+),120765..120767(+)		WP_003565220.1	peptide deformylase	89.3	56.5	39.4
MGA_221	LOCUS_02210	sequence1:123805..124098(+)	internal_stop_codon	123742..123744(+),124096..124098(+)		WP_000579379.1	preprotein translocase subunit SecA	99.0	11.5	64.6
MGA_222	LOCUS_02220	sequence1:124105..125496(+)	internal_stop_codon	124096..124098(+)		WP_011254222.1	preprotein translocase subunit SecA	99.8	59.8	56.7
MGA_224	LOCUS_02240	sequence1:126389..126982(-)	internal_stop_codon	126389..126391(-)		WP_002681379.1	restriction endonuclease subunit S	98.0	30.9	33.3
MGA_225	LOCUS_02250	sequence1:127097..127378(-)	internal_stop_codon	127010..127012(-),127097..127099(-)		WP_002287733.1	restriction endonuclease subunit S	95.7	21.0	39.6
MGA_229	LOCUS_02290	sequence1:130779..131393(-)	partial			WP_010874413.1	ABC transporter permease	97.5	72.7	28.9
MGA_231	LOCUS_02310	sequence1:131675..131929(-)	internal_stop_codon	131987..131989(-),131675..131677(-)		WP_003437017.1	ABC transporter ATP-binding protein	92.9	22.2	33.3
MGA_232	LOCUS_02320	sequence1:131987..132346(-)	internal_stop_codon	131987..131989(-)		WP_014601365.1	ABC transporter ATP-binding protein	100.0	32.5	52.9
MGA_233	LOCUS_02330	sequence1:132779..132979(-)	internal_stop_codon	132779..132781(-)		WP_041272316.1	ABC transporter ATP-binding protein	77.3	14.7	72.5
MGA_239	LOCUS_02390	sequence1:136702..137427(-)	frameshift		136740	WP_010881014.1	ABC transporter ATP-binding protein	49.4	21.5	33.3
MGA_242	LOCUS_02420	sequence1:138830..139249(-)	internal_stop_codon	138830..138832(-)		WP_011182943.1	FMN-dependent NADH-azoreductase	100.0	70.4	54.3
MGA_243	LOCUS_02430	sequence1:139542..140084(+)	internal_stop_codon	140082..140084(+)		WP_011459235.1	RecQ family ATP-dependent DNA helicase	87.8	10.8	28.0
MGA_256	LOCUS_02560	sequence1:147234..148022(+)	internal_stop_codon	148047..148049(+),148020..148022(+),148113..148115(+)		WP_011947930.1	arginine deiminase	98.5	64.0	41.4
MGA_257	LOCUS_02570	sequence1:148242..148454(+)	internal_stop_codon	148047..148049(+),148020..148022(+),148113..148115(+)		WP_005455102.1	arginine deiminase	97.1	16.7	55.9
MGA_260	LOCUS_02600	sequence1:149338..149553(+)	internal_stop_codon	149089..149091(+),149140..149142(+),149275..149277(+),149620..149622(+),149551..149553(+),149278..149280(+),149665..149667(+)		WP_010874664.1	APC family permease	100.0	12.9	54.8
MGA_264	LOCUS_02640	sequence1:150554..150940(+)	internal_stop_codon	150938..150940(+),151133..151135(+)		WP_126117892.1	ornithine carbamoyltransferase	100.0	36.9	83.6
MGA_265	LOCUS_02650	sequence1:150974..151135(+)	internal_stop_codon	150938..150940(+),151133..151135(+),151280..151282(+)		WP_126117892.1	ornithine carbamoyltransferase	100.0	15.3	81.1
MGA_266	LOCUS_02660	sequence1:151352..151600(+)	internal_stop_codon	151133..151135(+),151280..151282(+)		WP_126117892.1	ornithine carbamoyltransferase	100.0	23.6	85.4
MGA_272	LOCUS_02720	sequence1:156167..156625(-)	internal_stop_codon	156719..156721(-),156167..156169(-)		WP_001019480.1	aminopeptidase	93.4	39.6	39.7
MGA_273	LOCUS_02730	sequence1:156719..157003(-)	internal_stop_codon	156719..156721(-)		WP_009891992.1	aminopeptidase	98.9	25.4	41.9
MGA_274	LOCUS_02740	sequence1:157243..157389(-)	internal_stop_codon	157435..157437(-),157153..157155(-),157243..157245(-)		WP_011183442.1	inorganic diphosphatase	97.9	25.1	55.3
MGA_275	LOCUS_02750	sequence1:157435..157590(-)	internal_stop_codon	157435..157437(-),157243..157245(-)		WP_001047373.1	inorganic diphosphatase	94.1	27.7	47.9
MGA_278	LOCUS_02780	sequence1:158706..158873(+)	partial			WP_003436655.1	SprT family zinc-dependent metalloprotease	76.4	16.6	45.2
MGA_282	LOCUS_02820	sequence1:160321..161046(+)	internal_stop_codon	161044..161046(+)		WP_011166639.1	replication-associated recombination protein A	99.2	60.1	42.9
MGA_283	LOCUS_02830	sequence1:161095..161409(+)	internal_stop_codon	161044..161046(+),161500..161502(+),161407..161409(+)		WP_011166639.1	replication-associated recombination protein A	100.0	25.3	51.0
MGA_285	LOCUS_02850	sequence1:161948..162166(+)	internal_stop_codon	162284..162286(+),161843..161845(+),161765..161767(+),162164..162166(+)		WP_003736387.1	phenylalanine--tRNA ligase subunit alpha	88.9	18.9	52.2
MGA_286	LOCUS_02860	sequence1:162308..162469(+)	internal_stop_codon	162284..162286(+),162164..162166(+)		WP_000388219.1	phenylalanine--tRNA ligase subunit alpha	100.0	15.7	61.1
MGA_287	LOCUS_02870	sequence1:162480..162890(+)	internal_stop_codon	162888..162890(+)		WP_010918927.1	phenylalanine--tRNA ligase subunit beta	83.8	14.6	32.5
MGA_288	LOCUS_02880	sequence1:163023..164093(+)	internal_stop_codon	164091..164093(+),162888..162890(+)		WP_011475969.1	phenylalanine--tRNA ligase subunit beta	94.9	41.7	25.9
MGA_290	LOCUS_02900	sequence1:164714..164881(+)	internal_stop_codon	164879..164881(+)		WP_003700567.1	recombinase RecA	96.4	13.6	56.6
MGA_291	LOCUS_02910	sequence1:164894..165583(+)	internal_stop_codon	164879..164881(+),165581..165583(+)		WP_011166605.1	recombinase RecA	98.7	65.5	65.0
MGA_292	LOCUS_02920	sequence1:165753..165983(+)	internal_stop_codon	165981..165983(+),166149..166151(+)		WP_015944383.1	TIGR00282 family metallophosphoesterase	90.8	26.6	46.4
MGA_299	LOCUS_02990	sequence1:169824..170720(+)	partial			WP_011166731.1	DNA polymerase IV	98.3	72.4	36.3
MGA_301	LOCUS_03010	sequence1:171091..171435(+)	internal_stop_codon	171433..171435(+)		WP_004398676.1	nicotinate-nucleotide adenylyltransferase	99.1	59.8	39.8
MGA_302	LOCUS_03020	sequence1:171538..171795(+)	internal_stop_codon	171433..171435(+),172024..172026(+),171793..171795(+)		WP_011166626.1	nicotinate-nucleotide adenylyltransferase	90.6	21.3	34.6
MGA_309	LOCUS_03070	sequence1:184011..184400(+)	internal_stop_codon	183972..183974(+)		WP_012583346.1	50S ribosomal protein L4	93.0	58.4	42.3
MGA_313	LOCUS_03110	sequence1:186821..187000(+)	internal_stop_codon	186998..187000(+)		WP_002894486.1	30S ribosomal protein S3	100.0	27.2	64.4
MGA_314	LOCUS_03120	sequence1:187038..187163(+)	internal_stop_codon	187233..187235(+),187161..187163(+),187317..187319(+)		WP_005904138.1	50S ribosomal protein L16	90.2	25.2	73.0
MGA_319	LOCUS_03170	sequence1:188646..188876(+)	internal_stop_codon	188874..188876(+),188934..188936(+)		WP_001829778.1	50S ribosomal protein L5	100.0	42.5	51.3
MGA_326	LOCUS_03240	sequence1:192150..192818(+)	internal_stop_codon	192816..192818(+)		WP_011183039.1	preprotein translocase subunit SecY	98.6	45.3	36.0
MGA_327	LOCUS_03250	sequence1:192837..193256(+)	internal_stop_codon	192816..192818(+)		WP_011183039.1	preprotein translocase subunit SecY	86.3	24.9	39.7
MGA_340	LOCUS_03380	sequence1:200077..200616(+)	internal_stop_codon	200614..200616(+)		WP_011166766.1	cell division protein FtsZ	97.8	45.3	50.6
MGA_341	LOCUS_03390	sequence1:200740..201228(+)	internal_stop_codon	200614..200616(+)		WP_011166766.1	cell division protein FtsZ	95.7	36.3	30.1
MGA_343	LOCUS_03410	sequence1:203219..203476(-)	internal_stop_codon	203501..203503(-)		WP_010874750.1	FAD-dependent oxidoreductase	97.6	17.1	50.6
MGA_344	LOCUS_03420	sequence1:203501..204001(-)	internal_stop_codon	204248..204250(-),203501..203503(-)		WP_010905313.1	FAD-dependent oxidoreductase	95.2	35.4	42.1
MGA_345	LOCUS_03430	sequence1:204452..204592(-)	internal_stop_codon	204248..204250(-),204452..204454(-)		WP_011182934.1	FAD-dependent oxidoreductase	100.0	10.2	60.9
MGA_349	LOCUS_03470	sequence1:206906..212788(+)	partial			WP_080388512.1	hyperosmolarity resistance protein Ebh	98.4	20.5	21.7
MGA_353	LOCUS_03510	sequence1:214533..215360(+)	internal_stop_codon	214449..214451(+)		WP_011166352.1	peptide chain release factor 1	100.0	75.8	56.3
MGA_354	LOCUS_03520	sequence1:215371..215763(+)	internal_stop_codon	215761..215763(+),215986..215988(+)		WP_011475835.1	peptide chain release factor N(5)-glutamine methyltransferase	80.8	38.7	42.7
MGA_362	LOCUS_03600	sequence1:221451..222017(+)	partial			WP_011183397.1	alpha,alpha-phosphotrehalase	82.4	29.1	25.2
MGA_365	LOCUS_03630	sequence1:223970..224515(+)	partial			WP_010905272.1	phosphonate ABC transporter ATP-binding protein	78.5	57.7	55.6
MGA_369	LOCUS_03670	sequence1:225693..226139(+)	internal_stop_codon	226137..226139(+)		WP_000047881.1	phosphonate ABC transporter, permease protein PhnE	79.7	43.4	42.4
MGA_371	LOCUS_03690	sequence1:227035..227550(+)	internal_stop_codon	226978..226980(+)		WP_004082036.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	98.8	54.7	25.3
MGA_374	LOCUS_03720	sequence1:228825..229367(+)	internal_stop_codon	229365..229367(+)		WP_003644088.1	DNA-directed RNA polymerase subunit beta	80.6	11.6	39.0
MGA_375	LOCUS_03730	sequence1:229458..229991(+)	internal_stop_codon	229365..229367(+)		WP_111481144.1	DNA-directed RNA polymerase subunit beta	51.4	7.3	38.5
MGA_376	LOCUS_03740	sequence1:230316..231218(+)	internal_stop_codon	231216..231218(+)		WP_011167152.1	DNA-directed RNA polymerase subunit beta	99.0	22.9	57.2
MGA_377	LOCUS_03750	sequence1:231501..232163(+)	internal_stop_codon	231216..231218(+),232161..232163(+)		WP_003436174.1	DNA-directed RNA polymerase subunit beta	99.5	17.7	66.2
MGA_378	LOCUS_03760	sequence1:232191..232421(+)	internal_stop_codon	232161..232163(+)		WP_164927192.1	DNA-directed RNA polymerase subunit beta	75.0	4.4	54.4
MGA_380	LOCUS_03780	sequence1:233357..233494(+)	internal_stop_codon	233492..233494(+)		WP_005904068.1	DNA-directed RNA polymerase subunit beta'	100.0	3.4	51.1
MGA_381	LOCUS_03790	sequence1:233540..233791(+)	internal_stop_codon	233789..233791(+),233876..233878(+),233492..233494(+)		WP_025773568.1	DNA-directed RNA polymerase subunit beta'	100.0	7.0	74.7
MGA_382	LOCUS_03800	sequence1:234047..234853(+)	internal_stop_codon	233789..233791(+),233876..233878(+),235079..235081(+)		WP_004399688.1	DNA-directed RNA polymerase subunit beta'	76.1	16.3	41.2
MGA_383	LOCUS_03810	sequence1:235154..235918(+)	internal_stop_codon	235916..235918(+),235079..235081(+)		WP_000228741.1	DNA-directed RNA polymerase subunit beta'	98.4	19.3	55.0
MGA_384	LOCUS_03820	sequence1:235967..236785(+)	internal_stop_codon	235916..235918(+)		WP_004399688.1	DNA-directed RNA polymerase subunit beta'	70.2	16.5	43.4
MGA_385	LOCUS_03830	sequence1:237025..237249(+)	internal_stop_codon	237247..237249(+),237280..237282(+),237007..237009(+)		WP_011068835.1	type I restriction-modification system subunit M	100.0	8.3	45.9
MGA_386	LOCUS_03840	sequence1:237580..237840(+)	internal_stop_codon	237928..237930(+),237838..237840(+)		WP_011068835.1	type I restriction-modification system subunit M	100.0	9.9	66.3
MGA_387	LOCUS_03850	sequence1:238048..238440(+)	internal_stop_codon	238438..238440(+),237928..237930(+),238504..238506(+),237838..237840(+)		WP_013390020.1	type I restriction-modification system subunit M	100.0	15.2	62.3
MGA_389	LOCUS_03870	sequence1:239800..240252(+)	internal_stop_codon	240271..240273(+),239734..239736(+),240250..240252(+),239683..239685(+),240304..240306(+),240514..240516(+)		WP_011068838.1	HsdR family type I site-specific deoxyribonuclease	95.3	13.2	41.0
MGA_391	LOCUS_03890	sequence1:240541..241140(+)	internal_stop_codon	240514..240516(+)		WP_013390017.1	HsdR family type I site-specific deoxyribonuclease	97.5	16.3	36.6
MGA_392	LOCUS_03900	sequence1:241141..241761(+)	internal_stop_codon	241759..241761(+)		WP_013390017.1	HsdR family type I site-specific deoxyribonuclease	59.2	10.5	41.1
MGA_393	LOCUS_03910	sequence1:241795..242520(+)	internal_stop_codon	241759..241761(+)		WP_002288612.1	restriction endonuclease subunit R	83.8	45.5	26.7
MGA_395	LOCUS_03930	sequence1:243074..243739(-)	partial			WP_000071586.1	ribonuclease HIII	94.6	66.9	33.6
MGA_399	LOCUS_03970	sequence1:245563..246456(+)	internal_stop_codon	246670..246672(+),246454..246456(+),245311..245313(+),246550..246552(+)		WP_010905666.1	DNA topoisomerase IV subunit B	100.0	46.3	60.1
MGA_400	LOCUS_03980	sequence1:246736..246909(+)	internal_stop_codon	246907..246909(+),247036..247038(+)		WP_012775433.1	DNA topoisomerase IV subunit A	84.2	5.9	70.8
MGA_401	LOCUS_03990	sequence1:246913..247038(+)	internal_stop_codon	246907..246909(+),247036..247038(+)		WP_011166695.1	DNA topoisomerase IV subunit A	97.6	4.5	75.0
MGA_402	LOCUS_04000	sequence1:247042..248478(+)	internal_stop_codon	246907..246909(+),248476..248478(+),247036..247038(+)		WP_010989723.1	DNA topoisomerase IV subunit A	96.7	56.2	44.8
MGA_407	LOCUS_04050	sequence1:250293..250598(+)	internal_stop_codon	250869..250871(+),250596..250598(+)		WP_002355813.1	methionine--tRNA ligase	82.2	12.4	54.2
MGA_408	LOCUS_04060	sequence1:250683..250871(+)	internal_stop_codon	250869..250871(+),250596..250598(+),251046..251048(+),251121..251123(+)		WP_011475599.1	methionine--tRNA ligase	96.8	9.8	50.0
MGA_409	LOCUS_04070	sequence1:250902..251048(+)	internal_stop_codon	251121..251123(+),250869..250871(+),251187..251189(+),251046..251048(+),251247..251249(+)		WP_000134147.1	methionine--tRNA ligase	97.9	6.8	63.8
MGA_410	LOCUS_04080	sequence1:251271..251669(+)	internal_stop_codon	251667..251669(+),251121..251123(+),251187..251189(+),251046..251048(+),251247..251249(+)		WP_001051129.1	methionine--tRNA ligase	100.0	20.1	36.4
MGA_418	LOCUS_04160	sequence1:255664..256206(+)	internal_stop_codon	255574..255576(+),255637..255639(+),256204..256206(+)		WP_001880879.1	oligopeptide ABC transporter permease OppB	95.6	54.6	29.7
MGA_423	LOCUS_04210	sequence1:257732..258085(+)	internal_stop_codon	258083..258085(+)		WP_010874574.1	ABC transporter ATP-binding protein	81.2	22.7	42.3
MGA_424	LOCUS_04220	sequence1:258290..258598(+)	internal_stop_codon	258596..258598(+),258083..258085(+),258785..258787(+)		WP_010874574.1	ABC transporter ATP-binding protein	99.0	23.9	59.4
MGA_425	LOCUS_04230	sequence1:258870..259271(+)	partial			WP_003548861.1	ATP-binding cassette domain-containing protein	94.7	39.8	46.8
MGA_427	LOCUS_04250	sequence1:260969..261244(+)	frameshift		260718	WP_010874575.1	ATP-binding cassette domain-containing protein	96.7	10.6	40.0
MGA_459	LOCUS_04570	sequence1:278238..278540(-)	internal_stop_codon	278181..278183(-),278238..278240(-)		WP_011861867.1	triose-phosphate isomerase	98.0	40.5	43.0
MGA_461	LOCUS_04590	sequence1:278915..279220(+)	partial			WP_011023884.1	NUDIX domain-containing protein	52.5	37.2	48.1
MGA_463	LOCUS_04610	sequence1:280694..281227(-)	internal_stop_codon	281489..281491(-),281417..281419(-),281300..281302(-)		WP_011183252.1	valine--tRNA ligase	98.3	21.5	27.6
MGA_464	LOCUS_04620	sequence1:281489..281743(-)	internal_stop_codon	281972..281974(-),281870..281872(-),282017..282019(-),281417..281419(-),281300..281302(-),281753..281755(-),281996..281998(-),281900..281902(-),281975..281977(-),281831..281833(-),281489..281491(-)		WP_011183252.1	valine--tRNA ligase	98.8	9.5	65.1
MGA_465	LOCUS_04630	sequence1:282122..282664(-)	internal_stop_codon	281972..281974(-),281870..281872(-),282017..282019(-),282671..282673(-),282845..282847(-),281996..281998(-),282809..282811(-),281900..281902(-),281975..281977(-),282122..282124(-),282851..282853(-)		WP_011166500.1	valine--tRNA ligase	99.4	20.5	46.7
MGA_466	LOCUS_04640	sequence1:282851..283123(-)	internal_stop_codon	282809..282811(-),282671..282673(-),282845..282847(-),283136..283138(-),282851..282853(-)		WP_011254252.1	valine--tRNA ligase	94.4	9.7	63.5
MGA_473	LOCUS_04710	sequence1:287611..288102(-)	internal_stop_codon	288349..288351(-),288142..288144(-),288337..288339(-)		WP_011183060.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	97.5	33.6	33.5
MGA_474	LOCUS_04720	sequence1:288349..288585(-)	internal_stop_codon	288349..288351(-),288142..288144(-),288337..288339(-),288619..288621(-)		WP_015545356.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	100.0	16.3	57.7
MGA_475	LOCUS_04730	sequence1:288619..289029(-)	internal_stop_codon	288349..288351(-),288337..288339(-),288619..288621(-)		WP_015545356.1	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	97.1	27.6	60.6
MGA_478	LOCUS_04760	sequence1:289809..290348(-)	frameshift,internal_stop_codon	290311..290313(-),289809..289811(-)	290301	WP_011183059.1	amidase family protein	91.6	34.4	46.4
MGA_483	LOCUS_04810	sequence1:292081..292671(-)	internal_stop_codon	292723..292725(-)		WP_003246108.1	segregation/condensation protein A	98.0	79.3	27.9
MGA_484	LOCUS_04820	sequence1:292840..293316(-)	internal_stop_codon	293551..293553(-)		WP_020862806.1	lysophospholipid acyltransferase family protein	96.2	49.7	31.6
MGA_489	LOCUS_04870	sequence1:296009..296335(-)	internal_stop_codon	296453..296455(-),296375..296377(-)		WP_000244022.1	ribosome biogenesis GTPase Der	92.6	22.9	51.0
MGA_490	LOCUS_04880	sequence1:296453..297067(-)	internal_stop_codon	297188..297190(-),296453..296455(-),296375..296377(-)		WP_011183096.1	ribosome biogenesis GTPase Der	100.0	47.4	44.0
MGA_491	LOCUS_04890	sequence1:297188..297328(-)	internal_stop_codon	297188..297190(-)		WP_010942865.1	ribosome biogenesis GTPase Der	91.3	9.6	73.8
MGA_492	LOCUS_04900	sequence1:297814..298008(-)	internal_stop_codon	297814..297816(-),297658..297660(-),297568..297570(-)		WP_000361252.1	(d)CMP kinase	85.9	24.4	56.4
MGA_494	LOCUS_04920	sequence1:298518..298640(-)	internal_stop_codon	298914..298916(-)		WP_011228417.1	Xaa-Pro peptidase family protein	100.0	11.9	58.5
MGA_495	LOCUS_04930	sequence1:298914..299474(-)	internal_stop_codon	298914..298916(-),299475..299477(-)		WP_011183278.1	aminopeptidase P family protein	95.7	51.5	35.3
MGA_515	LOCUS_05130	sequence1:311311..311736(-)	internal_stop_codon	311950..311952(-),311848..311850(-)		WP_001204716.1	TrkH family potassium uptake protein	99.3	27.8	35.7
MGA_516	LOCUS_05140	sequence1:312202..312753(-)	internal_stop_codon	311950..311952(-),312202..312204(-)		WP_010874816.1	potassium transporter TrkG	66.7	21.6	38.5
MGA_518	LOCUS_05160	sequence1:314012..314842(+)	internal_stop_codon	314996..314998(+),314840..314842(+)		WP_003567691.1	CTP synthase	98.6	51.1	50.9
MGA_519	LOCUS_05170	sequence1:315167..315619(+)	internal_stop_codon	314996..314998(+)		WP_010880855.1	CTP synthase	97.3	27.3	45.9
MGA_520	LOCUS_05180	sequence1:315939..316184(+)	internal_stop_codon	316458..316460(+),316182..316184(+),315717..315719(+),315906..315908(+),316332..316334(+),316317..316319(+)		WP_002381313.1	isoleucine--tRNA ligase	100.0	8.7	44.4
MGA_521	LOCUS_05190	sequence1:316536..316817(+)	internal_stop_codon	316458..316460(+),316815..316817(+),316929..316931(+),316974..316976(+),316332..316334(+),316317..316319(+),316857..316859(+),316998..317000(+),317106..317108(+)		WP_011183288.1	isoleucine--tRNA ligase	96.8	10.4	46.8
MGA_524	LOCUS_05220	sequence1:318973..319272(+)	internal_stop_codon	319270..319272(+)		WP_011166635.1	elongation factor P	99.0	53.3	52.0
MGA_536	LOCUS_05340	sequence1:326812..327234(-)	internal_stop_codon	327298..327300(-),326812..326814(-)		WP_011016280.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	100.0	58.8	58.9
MGA_537	LOCUS_05350	sequence1:327504..327671(-)	partial			WP_000268750.1	30S ribosomal protein S16	98.2	62.2	60.7
MGA_547	LOCUS_05450	sequence1:332331..332783(-)	internal_stop_codon	332280..332282(-),332331..332333(-)		WP_003547131.1	ribosome biogenesis GTPase YlqF	100.0	52.8	35.8
MGA_549	LOCUS_05470	sequence1:332973..333182(-)	internal_stop_codon	333366..333368(-),333186..333188(-)		WP_011183273.1	tRNA (cytidine(34)-2'-O)-methyltransferase	97.1	37.4	62.7
MGA_551	LOCUS_05490	sequence1:333661..334329(-)	internal_stop_codon	334387..334389(-)		WP_003113628.1	NAD(P)-dependent alcohol dehydrogenase	97.7	59.3	55.8
MGA_552	LOCUS_05500	sequence1:334387..334761(-)	internal_stop_codon	334387..334389(-)		WP_003113628.1	NAD(P)-dependent alcohol dehydrogenase	96.0	34.4	53.2
MGA_553	LOCUS_05510	sequence1:335379..335528(-)	partial			WP_011476383.1	phosphoketolase family protein	100.0	6.4	50.0
MGA_554	LOCUS_05520	sequence1:335895..336164(-)	internal_stop_codon	335895..335897(-),336411..336413(-),336192..336194(-),336378..336380(-),336219..336221(-)		WP_011476383.1	phosphoketolase family protein	98.9	11.2	76.1
MGA_555	LOCUS_05530	sequence1:336411..336539(-)	internal_stop_codon	336411..336413(-),336591..336593(-),336744..336746(-),336192..336194(-),336378..336380(-),336219..336221(-)		WP_002294145.1	phosphoketolase family protein	100.0	5.3	69.0
MGA_556	LOCUS_05540	sequence1:337179..337496(-)	internal_stop_codon	337179..337181(-),337035..337037(-),337677..337679(-),337566..337568(-)		WP_011476383.1	phosphoketolase family protein	99.0	13.2	81.7
MGA_558	LOCUS_05560	sequence1:338580..339227(+)	internal_stop_codon	338571..338573(+)		WP_036891691.1	aldehyde dehydrogenase family protein	97.2	45.6	31.3
MGA_566	LOCUS_05640	sequence1:343115..343327(-)	internal_stop_codon	343358..343360(-)		WP_003547835.1	translation elongation factor Ts	97.1	21.7	47.3
MGA_567	LOCUS_05650	sequence1:343358..344008(-)	internal_stop_codon	343358..343360(-)		WP_011183458.1	translation elongation factor Ts	100.0	74.7	50.0
MGA_568	LOCUS_05660	sequence1:344008..344352(-)	internal_stop_codon	344521..344523(-)		WP_002982262.1	30S ribosomal protein S2	72.8	32.9	45.2
MGA_569	LOCUS_05670	sequence1:344521..344730(-)	internal_stop_codon	344740..344742(-),344521..344523(-)		WP_012583564.1	30S ribosomal protein S2	100.0	28.0	50.7
MGA_572	LOCUS_05700	sequence1:345652..346140(+)	internal_stop_codon	345556..345558(+)		WP_013399401.1	nitroreductase family protein	92.6	53.1	30.0
MGA_573	LOCUS_05710	sequence1:346198..347304(-)	partial			WP_209611766.1	restriction endonuclease subunit S	76.6	72.6	31.7
MGA_574	LOCUS_05720	sequence1:348278..349435(-)	internal_stop_codon	349541..349543(-)		WP_004081010.1	ribonuclease R	100.0	54.9	36.7
MGA_575	LOCUS_05730	sequence1:349541..350407(-)	internal_stop_codon	349541..349543(-)		WP_001829677.1	ribonuclease R	97.2	36.1	24.8
MGA_577	LOCUS_05750	sequence1:350653..351114(-)	internal_stop_codon	351118..351120(-),351130..351132(-)		WP_011183263.1	aspartate--tRNA ligase	95.4	25.1	52.1
MGA_578	LOCUS_05760	sequence1:351130..352113(-)	internal_stop_codon	352276..352278(-),351118..351120(-),351130..351132(-)		WP_012583332.1	aspartate--tRNA ligase	99.7	57.1	42.2
MGA_580	LOCUS_05780	sequence1:352596..352877(-)	internal_stop_codon	352596..352598(-),352971..352973(-)		WP_011073187.1	histidine--tRNA ligase	75.3	15.1	58.6
MGA_581	LOCUS_05790	sequence1:352971..353642(-)	internal_stop_codon	352971..352973(-)		WP_011475997.1	histidine--tRNA ligase	99.6	51.7	45.1
MGA_592	LOCUS_05900	sequence1:359630..359914(-)	internal_stop_codon	360017..360019(-)		WP_002295975.1	50S ribosomal protein L13	97.9	62.6	60.9
MGA_593	LOCUS_05910	sequence1:360144..360545(-)	partial			WP_012546112.1	16S rRNA (uracil(1498)-N(3))-methyltransferase	100.0	56.8	37.7
MGA_601	LOCUS_05990	sequence1:365597..366475(-)	internal_stop_codon	366530..366532(-),365378..365380(-),365597..365599(-)		WP_011166623.1	GTPase ObgE	94.9	65.8	51.2
MGA_602	LOCUS_06000	sequence1:366881..367423(-)	internal_stop_codon	366881..366883(-)		WP_010874684.1	deoxyribonuclease IV	97.8	62.9	43.3
MGA_603	LOCUS_06010	sequence1:367416..367607(-)	partial			WP_005418550.1	ion transporter	81.0	17.8	41.2
MGA_605	LOCUS_06030	sequence1:368597..369082(-)	internal_stop_codon	369137..369139(-)		WP_003547612.1	Nif3-like dinuclear metal center hexameric protein	50.9	30.6	39.0
MGA_606	LOCUS_06040	sequence1:369204..369722(-)	internal_stop_codon	369780..369782(-),369783..369785(-)		WP_003226225.1	RNA polymerase sigma factor RpoD	96.5	42.3	41.6
MGA_608	LOCUS_06060	sequence1:370723..372192(-)	partial			WP_011166649.1	DNA primase	72.0	56.2	31.5
MGA_609	LOCUS_06070	sequence1:372701..373024(-)	internal_stop_codon	372701..372703(-),373034..373036(-)		WP_010966472.1	glycine--tRNA ligase	91.6	21.6	43.0
MGA_610	LOCUS_06080	sequence1:373034..373438(-)	internal_stop_codon	373655..373657(-),373463..373465(-),373034..373036(-)		WP_012048370.1	glycine--tRNA ligase	100.0	28.9	67.9
MGA_613	LOCUS_06090	sequence2:331..789(+)	partial			WP_166061917.1	restriction endonuclease subunit S	70.4	26.9	36.9
MGA_614	LOCUS_06100	sequence2:975..1181(+)	internal_stop_codon	1179..1181(+)		WP_002680429.1	methionine adenosyltransferase	95.6	16.7	67.7
MGA_615	LOCUS_06110	sequence2:1263..2057(+)	internal_stop_codon	1179..1181(+),2055..2057(+)		WP_011183137.1	methionine adenosyltransferase	98.5	69.0	56.3
MGA_617	LOCUS_06130	sequence2:3275..3538(-)	internal_stop_codon	3566..3568(-),3275..3277(-)		WP_002263588.1	lipoate--protein ligase	62.1	16.4	53.7
MGA_618	LOCUS_06140	sequence2:3566..3976(-)	internal_stop_codon	3566..3568(-)		WP_003722753.1	lipoate protein ligase LplA1	91.9	38.4	53.9
MGA_620	LOCUS_06160	sequence2:4666..4896(-)	partial			WP_011074671.1	Cof-type HAD-IIB family hydrolase	97.4	15.7	40.5
MGA_621	LOCUS_06170	sequence2:5309..5881(+)	internal_stop_codon	5252..5254(+),5138..5140(+),5879..5881(+),5246..5248(+)		WP_011254445.1	cation-translocating P-type ATPase	90.0	19.4	43.0
MGA_622	LOCUS_06180	sequence2:5981..6481(+)	internal_stop_codon	5879..5881(+),6479..6481(+)		WP_011861573.1	cation-translocating P-type ATPase	98.8	19.8	45.6
MGA_623	LOCUS_06190	sequence2:6554..6874(+)	internal_stop_codon	6479..6481(+),6872..6874(+)		WP_010989583.1	cation-translocating P-type ATPase	98.1	11.9	58.7
MGA_624	LOCUS_06200	sequence2:6899..7240(+)	internal_stop_codon	7238..7240(+),7373..7375(+),7361..7363(+),7430..7432(+),6872..6874(+)		WP_002289743.1	cation-translocating P-type ATPase	90.3	12.2	55.1
MGA_627	LOCUS_06230	sequence2:7942..8625(+)	internal_stop_codon	8623..8625(+)		WP_005798723.1	ABC transporter ATP-binding protein	80.6	31.5	28.4
MGA_629	LOCUS_06250	sequence2:8938..9159(+)	internal_stop_codon	9157..9159(+),8929..8931(+)		WP_002680842.1	ABC transporter ATP-binding protein	80.8	9.9	45.8
MGA_630	LOCUS_06260	sequence2:9289..9729(+)	internal_stop_codon	9157..9159(+)		WP_010966684.1	ABC transporter ATP-binding protein	96.6	24.4	51.1
MGA_631	LOCUS_06270	sequence2:10041..10886(+)	internal_stop_codon	10884..10886(+),11034..11036(+)		WP_002376122.1	ABC transporter ATP-binding protein	95.4	45.1	27.8
MGA_632	LOCUS_06280	sequence2:11154..11543(+)	internal_stop_codon	10884..10886(+),11034..11036(+)		WP_012583012.1	ABC transporter ATP-binding protein	98.4	20.5	69.3
MGA_635	LOCUS_06310	sequence2:13481..13864(-)	internal_stop_codon	14003..14005(-)		WP_001218732.1	redox-regulated ATPase YchF	96.1	33.2	56.6
MGA_636	LOCUS_06320	sequence2:14003..14587(-)	internal_stop_codon	14003..14005(-)		WP_003020468.1	redox-regulated ATPase YchF	99.5	52.9	60.6
MGA_640	LOCUS_06360	sequence2:16702..16932(+)	internal_stop_codon	17071..17073(+),16642..16644(+)		WP_003436264.1	excinuclease ABC subunit UvrC	86.8	11.1	43.3
MGA_647	LOCUS_06430	sequence2:19546..19746(-)	internal_stop_codon	19810..19812(-),19783..19785(-)		WP_003427105.1	aspartate--ammonia ligase	100.0	19.8	60.6
MGA_648	LOCUS_06440	sequence2:19810..20046(-)	internal_stop_codon	20125..20127(-),20206..20208(-),20119..20121(-),20245..20247(-),19810..19812(-),19783..19785(-)		WP_011167158.1	aspartate--ammonia ligase	94.9	22.7	60.8
MGA_649	LOCUS_06450	sequence2:20245..20484(-)	internal_stop_codon	20119..20121(-),20125..20127(-),20245..20247(-),20206..20208(-)		WP_005903470.1	aspartate--ammonia ligase	94.9	22.9	55.3
MGA_651	LOCUS_06470	sequence2:21378..21887(+)	internal_stop_codon	21930..21932(+),21288..21290(+),21885..21887(+)		WP_020862568.1	M17 family metallopeptidase	99.4	37.3	50.3
MGA_652	LOCUS_06480	sequence2:21936..22175(+)	internal_stop_codon	21930..21932(+),21885..21887(+)		WP_011182967.1	M17 family metallopeptidase	74.7	13.2	47.5
MGA_653	LOCUS_06490	sequence2:22304..23296(+)	internal_stop_codon	23294..23296(+)		WP_011166365.1	M17 family metallopeptidase	81.2	58.3	44.4
MGA_661	LOCUS_06570	sequence2:27750..28475(+)	partial			WP_002858308.1	ABC-type lipopolysaccharide transporter PglK	80.5	36.7	31.8
MGA_662	LOCUS_06580	sequence2:29622..29744(-)	internal_stop_codon	29772..29774(-),29976..29978(-)		WP_010966473.1	lysine--tRNA ligase	100.0	7.8	65.0
MGA_663	LOCUS_06590	sequence2:29772..29939(-)	internal_stop_codon	29772..29774(-),29976..29978(-)		WP_003242743.1	lysine--tRNA ligase	98.2	10.8	70.4
MGA_664	LOCUS_06600	sequence2:29976..31097(-)	internal_stop_codon	29772..29774(-),29976..29978(-)		WP_003242743.1	lysine--tRNA ligase	99.2	75.4	50.5
MGA_667	LOCUS_06630	sequence2:32787..33173(+)	internal_stop_codon	33231..33233(+),33363..33365(+),33171..33173(+)		WP_010905087.1	ATP-binding cassette domain-containing protein	100.0	23.5	53.1
MGA_668	LOCUS_06640	sequence2:33243..33365(+)	internal_stop_codon	33171..33173(+),33504..33506(+),33231..33233(+),33363..33365(+)		WP_010940844.1	ATP-binding cassette domain-containing protein	97.5	7.2	71.8
MGA_669	LOCUS_06650	sequence2:33528..34001(+)	internal_stop_codon	33999..34001(+),34011..34013(+),33504..33506(+),33363..33365(+)		WP_010966231.1	ATP-binding cassette domain-containing protein	100.0	29.8	50.6
MGA_670	LOCUS_06660	sequence2:34017..34400(+)	internal_stop_codon	33999..34001(+),34011..34013(+)		WP_011071838.1	ABC-F family ATPase	88.2	21.1	44.6
MGA_671	LOCUS_06670	sequence2:34400..34606(+)	internal_stop_codon	34604..34606(+),34829..34831(+),34826..34828(+),34697..34699(+)		WP_008765875.1	C1 family peptidase	97.1	14.2	37.9
MGA_673	LOCUS_06690	sequence2:34859..35536(+)	internal_stop_codon	34829..34831(+),34826..34828(+),35600..35602(+),34604..34606(+),35699..35701(+),35534..35536(+),35552..35554(+),34697..34699(+)		WP_003549077.1	aminopeptidase C	98.7	49.7	33.6
MGA_675	LOCUS_06710	sequence2:35951..36148(+)	internal_stop_codon	36152..36154(+),36146..36148(+),36293..36295(+),35930..35932(+)		WP_003812447.1	C1 family peptidase	96.9	13.1	47.6
MGA_676	LOCUS_06720	sequence2:36344..36865(+)	internal_stop_codon	36146..36148(+),36293..36295(+),36881..36883(+),36152..36154(+),36929..36931(+),36863..36865(+),36941..36943(+)		WP_010906180.1	aminopeptidase C	100.0	39.7	33.7
MGA_677	LOCUS_06730	sequence2:37205..37969(+)	internal_stop_codon	37967..37969(+)		WP_011183371.1	translation elongation factor 4	100.0	43.2	68.0
MGA_678	LOCUS_06740	sequence2:38240..39001(+)	internal_stop_codon	37967..37969(+)		WP_003726525.1	translation elongation factor 4	99.6	41.4	61.1
MGA_681	LOCUS_06770	sequence2:40580..40750(-)	internal_stop_codon	40580..40582(-)		WP_032889952.1	cytidine/deoxycytidylate deaminase family protein	67.9	23.6	63.2
MGA_686	LOCUS_06820	sequence2:43809..44096(-)	partial			WP_211204934.1	site-specific DNA-methyltransferase	50.5	9.5	57.1
MGA_687	LOCUS_06830	sequence2:44133..44684(-)	internal_stop_codon	44694..44696(-),44133..44135(-),44127..44129(-)		WP_011964265.1	site-specific DNA-methyltransferase	75.4	26.2	47.3
MGA_689	LOCUS_06850	sequence2:45306..46070(-)	internal_stop_codon	46233..46235(-)		WP_012972513.1	Tex family protein	99.6	35.8	48.4
MGA_690	LOCUS_06860	sequence2:46233..46613(-)	internal_stop_codon	46233..46235(-)		WP_009895217.1	Tex family protein	99.2	17.5	47.2
MGA_691	LOCUS_06870	sequence2:46935..47435(-)	internal_stop_codon	46935..46937(-)		WP_001832739.1	Tex family protein	99.4	22.9	45.5
MGA_692	LOCUS_06880	sequence2:47448..48032(-)	internal_stop_codon	48261..48263(-),48183..48185(-)		WP_010922161.1	DegV family protein	55.7	39.0	36.6
MGA_693	LOCUS_06890	sequence2:48418..49203(+)	internal_stop_codon	49201..49203(+)		WP_011962338.1	tyrosine--tRNA ligase	99.6	62.9	47.4
MGA_697	LOCUS_06930	sequence2:50695..50886(+)	internal_stop_codon	50884..50886(+)		WP_002298115.1	type I DNA topoisomerase	82.5	6.9	59.6
MGA_699	LOCUS_06950	sequence2:51154..51393(+)	internal_stop_codon	51391..51393(+)		WP_002678704.1	type I DNA topoisomerase	79.7	7.8	50.8
MGA_700	LOCUS_06960	sequence2:51418..52329(+)	internal_stop_codon	51391..51393(+),52327..52329(+)		WP_012047858.1	type I DNA topoisomerase	99.3	45.8	37.1
MGA_708	LOCUS_07040	sequence2:59270..59746(+)	internal_stop_codon	59744..59746(+)		WP_052847022.1	NAD+ synthase	100.0	56.1	40.0
MGA_719	LOCUS_07150	sequence2:67801..68088(+)	partial			WP_010874960.1	F0F1 ATP synthase subunit C	55.8	50.5	50.9
MGA_722	LOCUS_07180	sequence2:69172..69918(+)	internal_stop_codon	69916..69918(+)		WP_010874957.1	F0F1 ATP synthase subunit alpha	96.0	45.9	60.1
MGA_723	LOCUS_07190	sequence2:69919..70734(+)	internal_stop_codon	69916..69918(+)		WP_011183010.1	F0F1 ATP synthase subunit alpha	93.4	49.0	62.3
MGA_733	LOCUS_07290	sequence2:77933..78361(-)	internal_stop_codon	77894..77896(-),77933..77935(-)		WP_004596591.1	ParA family protein	96.5	53.3	36.8
MGA_746	LOCUS_07420	sequence2:88575..89312(-)	internal_stop_codon	89313..89315(-),89454..89456(-)		WP_011166393.1	DUF853 family protein	95.9	29.0	30.1
MGA_777	LOCUS_07730	sequence2:104854..105954(+)	internal_stop_codon	105952..105954(+)		WP_011459549.1	ABC transporter ATP-binding protein	99.5	69.8	47.8
MGA_778	LOCUS_07740	sequence2:106036..106413(+)	internal_stop_codon	105952..105954(+)		WP_011166221.1	ABC transporter ATP-binding protein	87.2	20.3	59.6
MGA_781	LOCUS_07770	sequence2:107153..107425(+)	internal_stop_codon	107423..107425(+),106922..106924(+),107111..107113(+)		WP_011166220.1	ABC transporter permease	94.4	10.1	45.3
MGA_783	LOCUS_07790	sequence2:108166..108585(+)	internal_stop_codon	108583..108585(+),108664..108666(+),108742..108744(+),108655..108657(+)		WP_003228827.1	guanosine ABC transporter permease NupQ	77.7	34.2	45.0
MGA_787	LOCUS_07830	sequence2:109912..110124(+)	internal_stop_codon	110122..110124(+)		WP_002356165.1	pyrimidine-nucleoside phosphorylase	100.0	16.2	58.6
MGA_788	LOCUS_07840	sequence2:110197..110847(+)	internal_stop_codon	110893..110895(+),110122..110124(+),110845..110847(+)		WP_002289207.1	pyrimidine-nucleoside phosphorylase	99.5	49.7	59.1
MGA_789	LOCUS_07850	sequence2:110983..111207(+)	internal_stop_codon	110893..110895(+),110845..110847(+)		WP_011183016.1	thymidine phosphorylase	83.8	14.3	50.0
MGA_790	LOCUS_07860	sequence2:111216..111341(+)	internal_stop_codon	111339..111341(+)		WP_012028213.1	deoxyribose-phosphate aldolase	100.0	18.6	58.5
MGA_791	LOCUS_07870	sequence2:111417..111863(+)	internal_stop_codon	111339..111341(+)		WP_013448021.1	deoxyribose-phosphate aldolase	95.9	64.0	52.8
MGA_794	LOCUS_07900	sequence2:113042..113575(+)	internal_stop_codon	113573..113575(+)		WP_003357593.1	endopeptidase La	70.6	16.2	25.6
MGA_795	LOCUS_07910	sequence2:113816..114583(+)	internal_stop_codon	113573..113575(+),114581..114583(+)		WP_020862721.1	endopeptidase La	99.6	32.2	59.1
MGA_796	LOCUS_07920	sequence2:114674..115093(+)	internal_stop_codon	114581..114583(+)		WP_020862721.1	endopeptidase La	99.3	17.7	61.2
MGA_819	LOCUS_08150	sequence2:134081..134218(+)	internal_stop_codon	134042..134044(+),133910..133912(+),133934..133936(+),133988..133990(+)		WP_010883625.1	50S ribosomal protein L20	100.0	37.2	68.9
MGA_833	LOCUS_08290	sequence2:150300..150806(+)	internal_stop_codon	150942..150944(+),150822..150824(+),150804..150806(+)		WP_000127897.1	terminase large subunit	94.6	27.3	30.6
MGA_870	LOCUS_08660	sequence2:169254..170783(-)	partial			WP_010939463.1	phage/plasmid primase, P4 family	61.7	36.6	32.5
MGA_873	LOCUS_08690	sequence2:171694..172440(-)	internal_stop_codon	171694..171696(-)		WP_011475919.1	hypothetical protein	74.2	29.9	29.2
MGA_881	LOCUS_08770	sequence2:175970..176473(-)	partial			WP_087359848.1	DEAD/DEAH box helicase	80.8	30.9	37.0
MGA_891	LOCUS_08870	sequence2:183221..183841(+)	internal_stop_codon	183200..183202(+),183839..183841(+),183053..183055(+)		WP_011183311.1	tRNA 2-thiouridine(34) synthase MnmA	97.1	55.1	64.1
MGA_894	LOCUS_08900	sequence2:184329..184475(+)	internal_stop_codon	184533..184535(+),184473..184475(+),184098..184100(+),184659..184661(+),184179..184181(+)		WP_010880825.1	alanine--tRNA ligase	95.8	5.3	60.9
MGA_895	LOCUS_08910	sequence2:184926..185651(+)	internal_stop_codon	185649..185651(+),184659..184661(+)		WP_011166380.1	alanine--tRNA ligase	97.9	26.7	40.1
MGA_896	LOCUS_08920	sequence2:185736..186728(+)	internal_stop_codon	185649..185651(+)		WP_009889064.1	alanine--tRNA ligase	99.1	35.5	31.1
MGA_903	LOCUS_08990	sequence2:189717..190109(+)	internal_stop_codon	189618..189620(+)		WP_010905038.1	hypoxanthine phosphoribosyltransferase	88.5	62.3	48.7
MGA_904	LOCUS_09000	sequence2:190263..190445(+)	internal_stop_codon	190443..190445(+)		WP_011183049.1	energy-coupling factor transporter ATPase	98.3	14.5	45.8
MGA_905	LOCUS_09010	sequence2:190476..191060(+)	internal_stop_codon	190443..190445(+)		WP_011166888.1	energy-coupling factor transporter ATPase	100.0	48.5	53.0
MGA_906	LOCUS_09020	sequence2:191051..191278(+)	internal_stop_codon	191276..191278(+)		WP_012048350.1	energy-coupling factor transporter ATPase	98.7	25.7	39.2
MGA_907	LOCUS_09030	sequence2:191312..191752(+)	internal_stop_codon	191750..191752(+),191276..191278(+)		WP_002381364.1	energy-coupling factor ABC transporter ATP-binding protein	89.7	45.3	61.8
MGA_908	LOCUS_09040	sequence2:191977..192333(+)	partial			WP_011860635.1	energy-coupling factor transporter transmembrane component T	71.2	31.5	33.3
MGA_910	LOCUS_09060	sequence2:192535..192879(+)	partial			WP_011183051.1	energy-coupling factor transporter transmembrane component T	93.9	32.2	59.8
MGA_912	LOCUS_09080	sequence2:194231..194902(+)	partial			WP_012545963.1	NAD-dependent DNA ligase LigA	97.8	32.7	33.0
MGA_918	LOCUS_09130	sequence3:1232..1393(-)	internal_stop_codon	1232..1234(-),1145..1147(-),1157..1159(-),1436..1438(-)		WP_001801936.1	DNA polymerase III subunit alpha	100.0	3.7	56.6
MGA_919	LOCUS_09140	sequence3:1436..1732(-)	internal_stop_codon	1232..1234(-),1145..1147(-),1772..1774(-),1157..1159(-),1436..1438(-)		WP_011183185.1	PolC-type DNA polymerase III	100.0	6.6	61.2
MGA_920	LOCUS_09150	sequence3:1772..2206(-)	internal_stop_codon	2210..2212(-),1772..1774(-),2402..2404(-)		WP_011166548.1	PolC-type DNA polymerase III	99.3	9.6	62.9
MGA_921	LOCUS_09160	sequence3:2402..2677(-)	internal_stop_codon	2750..2752(-),2210..2212(-),2402..2404(-)		WP_010989735.1	DNA polymerase III subunit alpha	100.0	6.2	47.3
MGA_922	LOCUS_09170	sequence3:3029..3292(-)	internal_stop_codon	2750..2752(-),3029..3031(-),3299..3301(-)		WP_011166548.1	PolC-type DNA polymerase III	93.1	6.0	33.7
MGA_923	LOCUS_09180	sequence3:3299..3604(-)	internal_stop_codon	3299..3301(-),3635..3637(-)		WP_011183185.1	PolC-type DNA polymerase III	86.1	5.8	43.7
MGA_924	LOCUS_09190	sequence3:3635..4015(-)	internal_stop_codon	3635..3637(-)		WP_011183185.1	PolC-type DNA polymerase III	98.4	8.9	38.3
MGA_929	LOCUS_09240	sequence3:6490..6981(-)	internal_stop_codon	7039..7041(-)		WP_002293877.1	UMP kinase	98.8	66.7	50.3
MGA_930	LOCUS_09250	sequence3:7039..7206(-)	internal_stop_codon	7039..7041(-)		WP_002894857.1	UMP kinase	96.4	21.6	50.9
MGA_932	LOCUS_09270	sequence3:7494..7946(-)	frameshift,internal_stop_codon	7968..7970(-)	7505	WP_011183134.1	signal recognition particle-docking protein FtsY	100.0	40.9	57.3
MGA_933	LOCUS_09280	sequence3:7968..8540(-)	internal_stop_codon	7968..7970(-)		WP_003232026.1	signal recognition particle-docking protein FtsY	100.0	51.4	44.7
MGA_934	LOCUS_09290	sequence3:8842..9468(+)	internal_stop_codon	9466..9468(+)		WP_041272777.1	excinuclease ABC subunit UvrB	97.1	29.6	56.4
MGA_935	LOCUS_09300	sequence3:9628..10839(+)	internal_stop_codon	9466..9468(+)		WP_000607031.1	excinuclease ABC subunit UvrB	97.8	59.2	54.8
MGA_948	LOCUS_09430	sequence3:17325..17489(-)	internal_stop_codon	17325..17327(-)		WP_011183506.1	50S ribosomal protein L11	100.0	38.0	72.2
MGA_954	LOCUS_09490	sequence3:20905..21384(+)	internal_stop_codon	21382..21384(+)		WP_020863044.1	ABC transporter permease	89.3	20.7	33.1
MGA_957	LOCUS_09520	sequence3:23426..23896(+)	internal_stop_codon	23894..23896(+),23279..23281(+)		WP_011183378.1	asparagine--tRNA ligase	100.0	35.2	52.5
MGA_958	LOCUS_09530	sequence3:23897..24412(+)	internal_stop_codon	23894..23896(+),24410..24412(+)		WP_011166290.1	asparagine--tRNA ligase	100.0	38.5	48.9
MGA_961	LOCUS_09560	sequence3:26239..26874(+)	internal_stop_codon	26872..26874(+),27007..27009(+)		WP_002363179.1	DNA helicase PcrA	95.3	26.9	42.9
MGA_962	LOCUS_09570	sequence3:26881..27009(+)	internal_stop_codon	26872..26874(+),27235..27237(+),27007..27009(+)		WP_011183464.1	UvrD-helicase domain-containing protein	97.6	5.8	59.5
MGA_964	LOCUS_09590	sequence3:27916..28425(+)	internal_stop_codon	27811..27813(+)		WP_010880482.1	3'-5' exonuclease	89.3	19.6	36.4
MGA_967	LOCUS_09620	sequence3:29935..30627(+)	partial			WP_003704103.1	DegV family protein	83.9	66.9	27.4
MGA_968	LOCUS_09630	sequence3:30783..31082(+)	internal_stop_codon	31203..31205(+),31101..31103(+),31080..31082(+)		WP_003414210.1	prolyl aminopeptidase	85.9	26.3	51.8
MGA_969	LOCUS_09640	sequence3:31377..31718(+)	internal_stop_codon	31362..31364(+),31101..31103(+),31203..31205(+),31371..31373(+)		WP_005765551.1	prolyl aminopeptidase	91.2	32.8	45.3
MGA_971	LOCUS_09660	sequence3:32226..32615(-)	internal_stop_codon	32226..32228(-)		WP_003244707.1	nucleotidyltransferase	99.2	30.8	35.9
MGA_975	LOCUS_09700	sequence3:35460..36428(+)	internal_stop_codon	36426..36428(+),35382..35384(+)		WP_000393777.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	99.1	72.5	42.2
MGA_976	LOCUS_09710	sequence3:36513..36881(+)	internal_stop_codon	36879..36881(+)		WP_011101269.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	83.6	22.1	35.3
MGA_977	LOCUS_09720	sequence3:37356..37847(+)	internal_stop_codon	37314..37316(+),37248..37250(+)		WP_012048300.1	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	98.8	34.7	41.0
MGA_987	LOCUS_09820	sequence3:43545..43820(+)	internal_stop_codon	43818..43820(+)		WP_005694505.1	tryptophan--tRNA ligase	92.3	24.9	60.7
MGA_988	LOCUS_09830	sequence3:43860..44534(+)	internal_stop_codon	43818..43820(+)		WP_002378619.1	tryptophan--tRNA ligase	99.6	67.0	48.7
MGA_989	LOCUS_09840	sequence3:44536..44970(+)	internal_stop_codon	44968..44970(+),45019..45021(+),45151..45153(+)		WP_010965659.1	threonine--tRNA ligase	94.4	21.0	48.6
MGA_991	LOCUS_09860	sequence3:45304..45672(+)	internal_stop_codon	45670..45672(+),45283..45285(+),45151..45153(+)		WP_011183074.1	threonine--tRNA ligase	100.0	19.4	53.6
MGA_992	LOCUS_09870	sequence3:45691..45978(+)	internal_stop_codon	45670..45672(+),45976..45978(+)		WP_011183074.1	threonine--tRNA ligase	98.9	14.6	68.1
MGA_993	LOCUS_09880	sequence3:46036..46281(+)	internal_stop_codon	45976..45978(+)		WP_000786083.1	threonine--tRNA ligase	72.8	9.1	45.8
MGA_1006	LOCUS_10010	sequence3:53769..54074(+)	internal_stop_codon	54129..54131(+),54072..54074(+)		WP_005458327.1	endonuclease	98.0	17.3	39.0
MGA_1007	LOCUS_10020	sequence3:54168..54419(+)	internal_stop_codon	54417..54419(+),54486..54488(+),54129..54131(+),54072..54074(+),54471..54473(+)		WP_011962855.1	endonuclease	100.0	25.2	41.9
MGA_1009	LOCUS_10040	sequence3:54859..55389(-)	internal_stop_codon	55390..55392(-),54859..54861(-)		WP_011986025.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	99.4	65.1	44.7
MGA_1011	LOCUS_10060	sequence3:56225..56524(+)	internal_stop_codon	56771..56773(+),56522..56524(+)		WP_011183336.1	M20 family metallopeptidase	89.9	19.6	46.1
MGA_1012	LOCUS_10070	sequence3:56621..56773(+)	internal_stop_codon	56771..56773(+),56522..56524(+)		WP_020862797.1	M20 family metallopeptidase	100.0	11.1	54.0
MGA_1013	LOCUS_10080	sequence3:56795..57589(+)	internal_stop_codon	56771..56773(+),56522..56524(+)		WP_020862797.1	M20 family metallopeptidase	99.2	57.9	33.1
MGA_1017	LOCUS_10120	sequence3:61249..61425(-)	internal_stop_codon	61498..61500(-)		WP_002355965.1	serine--tRNA ligase	89.7	12.3	76.9
MGA_1018	LOCUS_10130	sequence3:61498..61815(-)	internal_stop_codon	61498..61500(-),61834..61836(-)		WP_011182914.1	serine--tRNA ligase	100.0	25.1	51.9
MGA_1019	LOCUS_10140	sequence3:61834..62493(-)	internal_stop_codon	62497..62499(-),61834..61836(-)		WP_003247131.1	serine--tRNA ligase	99.1	51.1	43.6
MGA_1021	LOCUS_10160	sequence3:63392..64009(+)	internal_stop_codon	64007..64009(+)		WP_003546830.1	ATP-dependent RecD-like DNA helicase	95.1	27.7	27.1
MGA_1022	LOCUS_10170	sequence3:64049..64975(+)	internal_stop_codon	64007..64009(+)		WP_004398511.1	ATP-dependent RecD-like DNA helicase	99.0	38.1	35.6
MGA_1024	LOCUS_10190	sequence3:65554..65991(+)	internal_stop_codon	65989..65991(+)		WP_010874579.1	tRNA lysidine(34) synthetase TilS	97.9	49.1	41.5
MGA_1026	LOCUS_10210	sequence3:67010..68161(+)	internal_stop_codon	67004..67006(+),68159..68161(+)		WP_011166250.1	ATP-dependent zinc metalloprotease FtsH	98.4	58.2	62.3
MGA_1027	LOCUS_10220	sequence3:68165..68755(+)	internal_stop_codon	68159..68161(+)		WP_002363441.1	ATP-dependent zinc metalloprotease FtsH	87.8	22.0	29.5
MGA_1029	LOCUS_10240	sequence3:69801..70616(-)	partial			WP_011182916.1	ABC transporter ATP-binding protein	98.2	45.2	42.5
MGA_1043	LOCUS_10380	sequence3:80856..81113(-)	internal_stop_codon	81246..81248(-)		WP_001832011.1	phosphonate ABC transporter ATP-binding protein	97.6	32.3	39.8
MGA_1044	LOCUS_10390	sequence3:81246..81569(-)	internal_stop_codon	81246..81248(-)		WP_000569258.1	phosphonate ABC transporter ATP-binding protein	85.0	35.4	38.5
MGA_1049	LOCUS_10440	sequence3:84933..85439(+)	internal_stop_codon	84900..84902(+),84843..84845(+)		WP_010965053.1	phosphate acyltransferase PlsX	94.6	47.4	40.9
MGA_1051	LOCUS_10460	sequence3:86127..86264(+)	internal_stop_codon	86262..86264(+)		WP_010921991.1	chromosome segregation protein SMC	100.0	3.8	60.0
MGA_1052	LOCUS_10470	sequence3:86265..87068(+)	internal_stop_codon	87066..87068(+),86262..86264(+)		WP_011166660.1	chromosome segregation protein SMC	99.6	27.0	34.1
MGA_1053	LOCUS_10480	sequence3:87210..89069(+)	internal_stop_codon	87066..87068(+)		WP_011183129.1	AAA family ATPase	98.9	63.2	30.7
MGA_1057	LOCUS_10520	sequence3:90374..90583(+)	internal_stop_codon	90368..90370(+),90581..90583(+),90152..90154(+),90797..90799(+),90584..90586(+)		WP_002286747.1	peptidase M13	100.0	10.9	76.8
MGA_1058	LOCUS_10530	sequence3:90629..90799(+)	internal_stop_codon	90584..90586(+),90368..90370(+),90581..90583(+),90797..90799(+)		WP_000599038.1	endopeptidase	100.0	8.9	64.3
MGA_1059	LOCUS_10540	sequence3:90839..90973(+)	internal_stop_codon	90584..90586(+),90797..90799(+),90581..90583(+)		WP_011102166.1	peptidase M13	95.5	6.6	71.4
MGA_1092	LOCUS_10870	sequence3:116024..116257(-)	internal_stop_codon	116024..116026(-),116333..116335(-)		WP_000003348.1	oligoendopeptidase F	62.3	7.9	47.9
MGA_1093	LOCUS_10880	sequence3:116333..116596(-)	internal_stop_codon	116681..116683(-),116816..116818(-),116333..116335(-)		WP_010906109.1	oligoendopeptidase F	100.0	14.5	52.9
MGA_1098	LOCUS_10930	sequence3:118306..119052(-)	partial			WP_005816838.1	amino acid permease	73.8	39.6	24.2
MGA_1111	LOCUS_11060	sequence3:128598..128903(+)	internal_stop_codon	128901..128903(+)		WP_010966171.1	thymidine kinase	92.1	47.7	38.7
MGA_1112	LOCUS_11070	sequence3:128904..129170(+)	internal_stop_codon	128901..128903(+)		WP_008763837.1	thymidine kinase	97.7	44.2	47.7
MGA_1118	LOCUS_11120	sequence4:2952..4166(+)	internal_stop_codon	4164..4166(+)		WP_011182898.1	chromosomal replication initiator protein DnaA	75.5	69.1	33.7
MGA_1127	LOCUS_11210	sequence4:8317..8496(-)	internal_stop_codon	8530..8532(-)		WP_003357068.1	thiol peroxidase	94.9	34.1	57.1
MGA_1128	LOCUS_11220	sequence4:8530..8799(-)	internal_stop_codon	8530..8532(-)		WP_001832701.1	thiol peroxidase	95.5	52.4	46.5
MGA_1136	LOCUS_11300	sequence4:13057..13923(+)	internal_stop_codon	13921..13923(+)		WP_011167112.1	PDxFFG protein	86.8	12.7	34.2
MGA_1137	LOCUS_11310	sequence4:13930..14379(+)	internal_stop_codon	14377..14379(+),13921..13923(+)		WP_011167112.1	PDxFFG protein	91.3	7.7	29.4
MGA_1142	LOCUS_11360	sequence4:16429..16797(+)	internal_stop_codon	16408..16410(+),16795..16797(+)		WP_011167112.1	PDxFFG protein	86.1	5.3	43.8
MGA_1144	LOCUS_11380	sequence4:17087..17458(+)	frameshift,internal_stop_codon	17457..17459(+),17613..17615(+)	17162	WP_011167113.1	ABC transporter substrate-binding protein	91.9	12.2	34.4
MGA_1145	LOCUS_11390	sequence4:18584..18946(+)	internal_stop_codon	19145..19147(+),18944..18946(+),19118..19120(+),19043..19045(+)		WP_011167113.1	ABC transporter substrate-binding protein	77.5	9.1	49.5
MGA_1147	LOCUS_11410	sequence4:20696..20881(+)	internal_stop_codon	20879..20881(+),20657..20659(+),20960..20962(+),20570..20572(+),20615..20617(+)		WP_011167114.1	ABC transporter permease	100.0	17.1	59.0
MGA_1149	LOCUS_11430	sequence4:21059..21262(+)	internal_stop_codon	20879..20881(+),20960..20962(+),21260..21262(+)		WP_011167114.1	ABC transporter permease	100.0	18.8	73.1
MGA_1153	LOCUS_11470	sequence4:23162..23479(+)	internal_stop_codon	23477..23479(+),23105..23107(+),22961..22963(+),23726..23728(+),23639..23641(+)		WP_011167116.1	ABC transporter ATP-binding protein	100.0	21.6	77.1
MGA_1154	LOCUS_11480	sequence4:23489..23641(+)	internal_stop_codon	23477..23479(+),23726..23728(+),23639..23641(+)		WP_011167116.1	ABC transporter ATP-binding protein	98.0	10.2	79.6
MGA_1159	LOCUS_11530	sequence4:26807..27760(+)	frameshift,internal_stop_codon	27387..27389(+),27759..27761(+),28002..28004(+)	27364,27428	WP_003428238.1	transcription termination factor NusA	99.7	71.6	26.5
MGA_1160	LOCUS_11540	sequence4:27785..28003(+)	internal_stop_codon	27758..27760(+)		WP_003231912.1	transcription termination factor NusA	94.4	17.3	52.9
MGA_1163	LOCUS_11570	sequence4:28708..29445(+)	internal_stop_codon	29443..29445(+)		WP_011166542.1	translation initiation factor IF-2	99.2	39.7	55.7
MGA_1164	LOCUS_11580	sequence4:29797..30519(+)	partial			WP_010937814.1	translation initiation factor IF-2	97.9	22.5	36.6
MGA_1166	LOCUS_11600	sequence4:30843..31115(+)	internal_stop_codon	31113..31115(+)		WP_011183567.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	100.0	14.4	62.2
MGA_1167	LOCUS_11610	sequence4:31119..31529(+)	internal_stop_codon	31563..31565(+),31527..31529(+),31113..31115(+)		WP_010874914.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	86.8	19.1	43.2
MGA_1168	LOCUS_11620	sequence4:31626..32666(+)	internal_stop_codon	31563..31565(+),31527..31529(+)		WP_000249657.1	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	99.1	57.1	52.1
MGA_1170	LOCUS_11640	sequence4:33173..33370(-)	internal_stop_codon	33401..33403(-)		WP_011022631.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	93.8	12.2	46.0
MGA_1171	LOCUS_11650	sequence4:33401..34693(-)	internal_stop_codon	33401..33403(-)		WP_010874985.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	98.1	84.1	49.4
MGA_1181	LOCUS_11750	sequence4:39277..39519(+)	internal_stop_codon	39214..39216(+)		WP_011166956.1	ABC transporter substrate-binding protein	86.2	14.1	52.2
MGA_1182	LOCUS_11760	sequence4:39529..39759(+)	partial			WP_013230927.1	ABC transporter ATP-binding protein	89.5	10.5	48.5
MGA_1183	LOCUS_11770	sequence4:39847..40278(+)	internal_stop_codon	39757..39759(+)		WP_011166955.1	ATP-binding cassette domain-containing protein	97.2	55.4	63.3
MGA_1193	LOCUS_11870	sequence4:44505..45314(+)	partial			WP_011948154.1	cell wall-binding repeat-containing protein	46.8	9.2	34.9
MGA_1194	LOCUS_11880	sequence4:45376..45660(+)	internal_stop_codon	45874..45876(+),45889..45891(+),45658..45660(+)		WP_003733219.1	LD-carboxypeptidase	97.9	28.4	54.3
MGA_1197	LOCUS_11910	sequence4:46790..47884(-)	internal_stop_codon	46790..46792(-),47948..47950(-)		WP_011166843.1	ribonuclease J	97.0	57.7	39.9
MGA_1198	LOCUS_11920	sequence4:47948..48316(-)	internal_stop_codon	48329..48331(-),47948..47950(-)		WP_011166843.1	ribonuclease J	90.2	18.0	46.4
MGA_1200	LOCUS_11940	sequence4:50306..51295(-)	internal_stop_codon	51446..51448(-)		WP_011166637.1	trigger factor	79.3	61.2	37.3
MGA_1205	LOCUS_11990	sequence4:53093..53278(+)	internal_stop_codon	53276..53278(+)		WP_010880276.1	phosphopyruvate hydratase	86.9	12.4	73.6
MGA_1206	LOCUS_12000	sequence4:53297..54052(+)	internal_stop_codon	54050..54052(+),53276..53278(+)		WP_011166450.1	phosphopyruvate hydratase	98.0	54.5	54.4
MGA_1207	LOCUS_12010	sequence4:54068..54460(+)	internal_stop_codon	54050..54052(+)		WP_011166450.1	phosphopyruvate hydratase	100.0	28.8	64.6
MGA_1215	LOCUS_12090	sequence4:59188..59706(+)	internal_stop_codon	59062..59064(+),59707..59709(+),59704..59706(+)		WP_003243401.1	glucose-6-phosphate isomerase	94.8	36.2	36.8
MGA_1217	LOCUS_12110	sequence4:60171..60461(+)	internal_stop_codon	60459..60461(+)		WP_011183271.1	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	70.8	31.5	44.1
MGA_1219	LOCUS_12130	sequence4:60931..61068(+)	internal_stop_codon	61204..61206(+),61066..61068(+)		WP_010874746.1	dihydrolipoyl dehydrogenase	73.3	7.2	75.8
MGA_1220	LOCUS_12140	sequence4:61213..62316(+)	internal_stop_codon	61204..61206(+),62314..62316(+),61066..61068(+)		WP_011166465.1	dihydrolipoyl dehydrogenase	99.2	61.5	40.7
MGA_1225	LOCUS_12190	sequence4:64245..64478(-)	partial			WP_011182939.1	dihydrolipoyl dehydrogenase	98.7	12.6	67.1
MGA_1226	LOCUS_12200	sequence4:64562..64951(-)	internal_stop_codon	65060..65062(-),64562..64564(-)		WP_010874747.1	dihydrolipoamide acetyltransferase family protein	100.0	32.1	41.1
MGA_1230	LOCUS_12240	sequence4:65590..66333(-)	internal_stop_codon	66412..66414(-)		WP_011166463.1	alpha-ketoacid dehydrogenase subunit beta	99.6	74.8	52.8
MGA_1231	LOCUS_12250	sequence4:66412..66588(-)	internal_stop_codon	66412..66414(-)		WP_010874748.1	pyruvate dehydrogenase complex E1 component subunit beta	93.1	16.5	63.0
MGA_1232	LOCUS_12260	sequence4:67120..67317(-)	internal_stop_codon	67369..67371(-),66934..66936(-),67120..67122(-),67558..67560(-),67444..67446(-),66856..66858(-)		WP_011228310.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	95.4	17.6	51.6
MGA_1236	LOCUS_12300	sequence4:69893..70513(+)	internal_stop_codon	69824..69826(+)		WP_011166467.1	acetate kinase	99.0	52.4	43.5
MGA_1239	LOCUS_12330	sequence4:72264..72665(-)	partial			WP_011986393.1	carboxymuconolactone decarboxylase family protein	72.2	84.2	37.5
MGA_1240	LOCUS_12340	sequence4:72864..73094(+)	internal_stop_codon	72822..72824(+),73092..73094(+),72732..72734(+),73110..73112(+),73155..73157(+)		WP_011166523.1	proline--tRNA ligase	100.0	16.0	68.4
MGA_1241	LOCUS_12350	sequence4:73215..73460(+)	internal_stop_codon	73092..73094(+),73458..73460(+),73110..73112(+),73155..73157(+)		WP_011183374.1	proline--tRNA ligase	100.0	17.1	59.3
MGA_1242	LOCUS_12360	sequence4:73494..73946(+)	internal_stop_codon	73986..73988(+),73458..73460(+),73944..73946(+)		WP_011762574.1	proline--tRNA ligase	100.0	31.4	40.3
MGA_1247	LOCUS_12410	sequence4:76320..76814(-)	internal_stop_codon	76320..76322(-)		WP_011166475.1	30S ribosomal protein S4	100.0	80.3	59.3
MGA_1254	LOCUS_12480	sequence4:80828..81442(+)	internal_stop_codon	80756..80758(+),81440..81442(+),80633..80635(+),80741..80743(+)		WP_012869579.1	DNA polymerase III subunit alpha	100.0	17.4	42.2
MGA_1255	LOCUS_12490	sequence4:81512..82456(+)	internal_stop_codon	81440..81442(+)		WP_011087634.1	DNA polymerase III subunit alpha	89.8	23.9	37.2
MGA_1257	LOCUS_12510	sequence4:82800..83717(+)	partial			WP_011183480.1	DNA polymerase I	93.1	32.0	36.8
MGA_1258	LOCUS_12520	sequence4:83717..84268(+)	partial			WP_010874738.1	dephospho-CoA kinase	76.0	73.0	28.1
MGA_1259	LOCUS_12530	sequence4:84303..84995(+)	partial			WP_003548343.1	DnaD domain protein	65.2	35.0	29.2
MGA_1263	LOCUS_12570	sequence4:86277..86534(+)	internal_stop_codon	86532..86534(+)		WP_010933146.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	25.4	55.3
MGA_1264	LOCUS_12580	sequence4:86760..87215(+)	internal_stop_codon	87213..87215(+),86532..86534(+)		WP_010874786.1	type I glyceraldehyde-3-phosphate dehydrogenase	100.0	44.8	66.9
MGA_1265	LOCUS_12590	sequence4:87441..87680(+)	internal_stop_codon	87678..87680(+)		WP_011166497.1	ribonuclease J	100.0	13.6	49.4
MGA_1267	LOCUS_12610	sequence4:88119..88709(+)	internal_stop_codon	88707..88709(+),88059..88061(+)		WP_011182989.1	ribonuclease J	99.5	33.4	28.6
MGA_1278	LOCUS_12720	sequence4:94531..94761(-)	internal_stop_codon	94810..94812(-),94765..94767(-),95008..95010(-),94831..94833(-)		WP_011166365.1	M17 family metallopeptidase	94.7	16.2	46.6
MGA_1279	LOCUS_12730	sequence4:94831..95001(-)	internal_stop_codon	94810..94812(-),94765..94767(-),95008..95010(-),94831..94833(-)		WP_011182968.1	M17 family metallopeptidase	100.0	12.5	66.1
MGA_1280	LOCUS_12740	sequence4:95008..95886(-)	internal_stop_codon	94810..94812(-),94765..94767(-),95008..95010(-),94831..94833(-)		WP_011182967.1	M17 family metallopeptidase	98.6	63.8	38.6
MGA_1282	LOCUS_12760	sequence4:96463..96606(-)	internal_stop_codon	96745..96747(-),96463..96465(-),96832..96834(-),96430..96432(-),96676..96678(-),96847..96849(-)		WP_011183388.1	leucine--tRNA ligase	89.4	5.2	81.0
MGA_1283	LOCUS_12770	sequence4:97066..97503(-)	internal_stop_codon	96832..96834(-),97738..97740(-),97645..97647(-),96847..96849(-),97678..97680(-),97066..97068(-),97042..97044(-),96907..96909(-)		WP_011475758.1	leucine--tRNA ligase	100.0	18.1	58.2
MGA_1284	LOCUS_12780	sequence4:98086..98208(-)	internal_stop_codon	97849..97851(-),97909..97911(-),98269..98271(-),98281..98283(-),98086..98088(-)		WP_001108730.1	leucine--tRNA ligase	100.0	5.0	90.0
MGA_1285	LOCUS_12790	sequence4:98496..98876(+)	internal_stop_codon	98874..98876(+),98937..98939(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	95.2	37.0	46.7
MGA_1286	LOCUS_12800	sequence4:99457..99843(+)	internal_stop_codon	99333..99335(+),100018..100020(+),99895..99897(+),99357..99359(+),99841..99843(+),99904..99906(+)		WP_010874497.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	89.1	36.1	57.3
MGA_1288	LOCUS_12820	sequence4:101559..102344(-)	internal_stop_codon	101559..101561(-)		WP_011166245.1	2-hydroxyacid dehydrogenase	100.0	79.6	57.5
MGA_1289	LOCUS_12830	sequence4:102385..102570(-)	internal_stop_codon	102766..102768(-),102688..102690(-),102628..102630(-),102385..102387(-),102832..102834(-),102622..102624(-)		WP_011166246.1	AEC family transporter	95.1	15.5	60.3
MGA_1294	LOCUS_12880	sequence4:104889..105449(-)	internal_stop_codon	104889..104891(-)		WP_005812720.1	ATP-binding cassette domain-containing protein	94.1	56.9	48.6
MGA_1295	LOCUS_12890	sequence4:105737..106336(+)	internal_stop_codon	106334..106336(+)		WP_002356194.1	elongation factor Tu	99.5	49.9	79.3
MGA_1296	LOCUS_12900	sequence4:106376..106924(+)	internal_stop_codon	106334..106336(+)		WP_001040568.1	elongation factor Tu	100.0	46.2	71.4
MGA_1304	LOCUS_12980	sequence4:110910..111062(-)	internal_stop_codon	111072..111074(-)		WP_016356688.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	98.0	6.1	67.3
MGA_1305	LOCUS_12990	sequence4:111072..112310(-)	internal_stop_codon	112446..112448(-),111072..111074(-)		WP_003723769.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	99.8	62.7	54.3
MGA_1306	LOCUS_13000	sequence4:112722..112856(-)	internal_stop_codon	112722..112724(-),112446..112448(-)		WP_010874360.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	100.0	6.8	63.6
MGA_1308	LOCUS_13010	sequence5:124..624(-)	partial			WP_011166256.1	DNA polymerase III subunit delta	63.3	39.8	33.3
MGA_1309	LOCUS_13020	sequence5:624..941(-)	internal_stop_codon	1014..1016(-)		WP_003131575.1	dTMP kinase	95.2	45.5	38.6
MGA_1310	LOCUS_13030	sequence5:1014..1277(-)	internal_stop_codon	1014..1016(-)		WP_011166257.1	dTMP kinase	93.1	36.6	47.6
MGA_1312	LOCUS_13050	sequence5:1875..2168(-)	partial			WP_003549112.1	YbaB/EbfC family nucleoid-associated protein	83.5	74.8	41.0
MGA_1315	LOCUS_13080	sequence5:4098..4505(-)	internal_stop_codon	4098..4100(-)		WP_001829412.1	DNA polymerase III subunit gamma/tau	96.3	23.4	58.2
MGA_1326	LOCUS_13190	sequence5:12549..13151(+)	internal_stop_codon	13149..13151(+)		WP_011182956.1	excinuclease ABC subunit UvrA	97.5	20.7	68.4
MGA_1327	LOCUS_13200	sequence5:13329..13514(+)	internal_stop_codon	13512..13514(+),13743..13745(+),13149..13151(+)		WP_011167092.1	excinuclease ABC subunit UvrA	100.0	6.4	50.8
MGA_1329	LOCUS_13220	sequence5:13758..14345(+)	internal_stop_codon	13743..13745(+),14343..14345(+)		WP_002296519.1	excinuclease ABC subunit UvrA	100.0	20.8	61.5
MGA_1330	LOCUS_13230	sequence5:14457..15377(+)	internal_stop_codon	14343..14345(+)		WP_000045572.1	excinuclease ABC subunit UvrA	99.0	31.7	65.1
MGA_1331	LOCUS_13240	sequence5:15513..16106(+)	internal_stop_codon	16104..16106(+),15486..15488(+)		WP_011035716.1	restriction endonuclease subunit S	95.9	44.0	40.2