{ "type": "genome", "identifier": "GCF_017051705.1", "organism": "Algoriphagus lutimaris", "title": "Algoriphagus lutimaris", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Guangdong Institute of Microbiology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_017051705.1", "bioproject": "PRJNA224116", "biosample": "SAMN17981529", "wgs_master": "JAFIDJ000000000.1", "refseq_category": "reference genome", "taxid": "613197", "species_taxid": "613197", "organism_name": "Algoriphagus lutimaris", "infraspecific_name": "strain=KCTC 22630", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/02/27", "asm_name": "ASM1705170v1", "asm_submitter": "Guangdong Institute of Microbiology", "gbrs_paired_asm": "GCA_017051705.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/017/051/705/GCF_017051705.1_ASM1705170v1", 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"sample_host_location": [ "South Korea" ], "sample_host_location_id": [], "data_size": "1.331 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4718979", "Number of Sequences": "61", "Longest Sequences (bp)": "2616974", "N50 (bp)": "2616974", "Gap Ratio (%)": "0.016275", "GCcontent (%)": "38.7", "Number of CDSs": "3845", "Average Protein Length": "364.3", "Coding Ratio (%)": "89.0", "Number of rRNAs": "3", "Number of tRNAs": "41", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Algoriphagus lutimaris", "strain": "strain=KCTC 22630", "accession": "GCA_017051705.1", "taxid": 613197, "species_taxid": 613197, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1564, 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"strain=X100-76", "accession": "GCA_021596945.1", "taxid": 2782006, "species_taxid": 2782006, "relation_to_type": "type", "validated": true, "ani": 76.8453, "matched_fragments": 95, "total_fragments": 1564, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cyclobacterium salsum", "strain": "strain=SYSU L10167", "accession": "GCA_010119245.1", "taxid": 2666329, "species_taxid": 2666329, "relation_to_type": "type", "validated": true, "ani": 76.1441, "matched_fragments": 50, "total_fragments": 1564, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cyclobacterium roseum", "strain": "strain=SYSU L10180", "accession": "GCA_010119225.1", "taxid": 2666137, "species_taxid": 2666137, "relation_to_type": "type", "validated": true, "ani": 76.0357, "matched_fragments": 51, "total_fragments": 1564, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": 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