{
    "type": "genome",
    "identifier": "GCF_017347605.1",
    "organism": "Prevotella herbatica",
    "title": "Prevotella herbatica",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Hirosaki University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_017347605.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMD00275815",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "2801997",
        "species_taxid": "2801997",
        "organism_name": "Prevotella herbatica",
        "infraspecific_name": "strain=WR041",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/03/02",
        "asm_name": "ASM1734760v1",
        "asm_submitter": "Hirosaki University",
        "gbrs_paired_asm": "GCA_017347605.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/017/347/605/GCF_017347605.1_ASM1734760v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3524789",
        "genome_size_ungapped": "3524789",
        "gc_percent": "37.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_017347605.1-RS_2024_10_23",
        "annotation_date": "2024-10-23",
        "total_gene_count": "2734",
        "protein_coding_gene_count": "2638",
        "non_coding_gene_count": "75",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-03-02",
    "dateModified": "2021-03-02",
    "datePublished": "2021-03-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Prevotella herbatica"
        ],
        "sample_taxid": [
            "2801997"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Japan:Betsukai-machi, Hokkaido"
        ],
        "sample_host_location_id": [],
        "data_size": "0.994 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3524789",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "3524789",
        "N50 (bp)": "3524789",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "37.5",
        "Number of CDSs": "2651",
        "Average Protein Length": "380.1",
        "Coding Ratio (%)": "85.8",
        "Number of rRNAs": "15",
        "Number of tRNAs": "59",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
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                "accession": "GCA_017347605.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
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                "accession": "GCA_000613605.1",
                "taxid": 185294,
                "species_taxid": 185294,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella paludivivens",
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                "status": "below_threshold"
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                "organism_name": "Prevotella oryzae",
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "organism_name": "Prevotella melaninogenica",
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                "species_taxid": 28132,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella melaninogenica",
                "strain": "strain=FDAARGOS_1566",
                "accession": "GCA_020735785.1",
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                "species_taxid": 28132,
                "relation_to_type": "suspected-type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella bryantii",
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                "accession": "GCA_019973295.1",
                "taxid": 77095,
                "species_taxid": 77095,
                "relation_to_type": "type",
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                "ani": 78.3545,
                "matched_fragments": 128,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella bryantii",
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                "accession": "GCA_022024235.1",
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                "ani": 78.1088,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella salivae",
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                "accession": "GCA_000185845.1",
                "taxid": 228604,
                "species_taxid": 228604,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8624,
                "matched_fragments": 105,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella jejuni",
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                "accession": "GCA_900187995.1",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Prevotella copri",
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            },
            {
                "organism_name": "Prevotella albensis",
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                "ani": 77.5112,
                "matched_fragments": 149,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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}