{
    "type": "genome",
    "identifier": "GCF_017377795.1",
    "organism": "Williamsia soli",
    "title": "Williamsia soli",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Shandong Univesity",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_017377795.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN18253917",
        "wgs_master": "JAFRDR000000000.1",
        "refseq_category": "reference genome",
        "taxid": "364929",
        "species_taxid": "364929",
        "organism_name": "Williamsia soli",
        "infraspecific_name": "strain=C17",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/03/17",
        "asm_name": "ASM1737779v1",
        "asm_submitter": "Shandong Univesity",
        "gbrs_paired_asm": "GCA_017377795.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/017/377/795/GCF_017377795.1_ASM1737779v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6072852",
        "genome_size_ungapped": "6072852",
        "gc_percent": "64.500000",
        "replicon_count": "0",
        "scaffold_count": "25",
        "contig_count": "25",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_017377795.1-RS_2024_08_29",
        "annotation_date": "2024-08-29",
        "total_gene_count": "5668",
        "protein_coding_gene_count": "5570",
        "non_coding_gene_count": "58",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-03-17",
    "dateModified": "2021-03-17",
    "datePublished": "2021-03-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Williamsia soli"
        ],
        "sample_taxid": [
            "364929"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "1.684 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6072852",
        "Number of Sequences": "25",
        "Longest Sequences (bp)": "1013368",
        "N50 (bp)": "506168",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.7",
        "Number of CDSs": "5649",
        "Average Protein Length": "327.5",
        "Coding Ratio (%)": "91.4",
        "Number of rRNAs": "2",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Williamsia soli",
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                "accession": "GCA_017377795.1",
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                "species_taxid": 364929,
                "relation_to_type": "type",
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                "ani": 100.0,
                "matched_fragments": 2009,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Williamsia limnetica",
                "strain": "strain=DSM 45521",
                "accession": "GCA_003217475.1",
                "taxid": 882452,
                "species_taxid": 882452,
                "relation_to_type": "type",
                "validated": true,
                "ani": 86.4172,
                "matched_fragments": 1517,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Williamsia muralis",
                "strain": "strain=NBRC 105860",
                "accession": "GCA_001598915.1",
                "taxid": 85044,
                "species_taxid": 85044,
                "relation_to_type": "suspected-type",
                "validated": true,
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                "matched_fragments": 933,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Williamsia muralis",
                "strain": "strain=DSM 44343",
                "accession": "GCA_003634525.1",
                "taxid": 85044,
                "species_taxid": 85044,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 80.1411,
                "matched_fragments": 936,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Williamsia maris",
                "strain": "strain=DSM 44693",
                "accession": "GCA_024171815.1",
                "taxid": 72806,
                "species_taxid": 72806,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5324,
                "matched_fragments": 568,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gordonia amicalis",
                "strain": "strain=DSM 44461",
                "accession": "GCA_012395955.1",
                "taxid": 89053,
                "species_taxid": 89053,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2813,
                "matched_fragments": 493,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gordonia polyisoprenivorans",
                "strain": "strain=ATCC BAA-14",
                "accession": "GCA_012396285.1",
                "taxid": 84595,
                "species_taxid": 84595,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9883,
                "matched_fragments": 461,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gordonia insulae",
                "strain": "strain=MMS17-SY073",
                "accession": "GCA_003855095.1",
                "taxid": 2420509,
                "species_taxid": 2420509,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9788,
                "matched_fragments": 546,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nocardia asteroides",
                "strain": "strain=NBRC 15531",
                "accession": "GCA_000308355.2",
                "taxid": 1824,
                "species_taxid": 1824,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.4717,
                "matched_fragments": 361,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nocardia asteroides",
                "strain": "strain=ATCC 19247",
                "accession": "GCA_005863255.1",
                "taxid": 1824,
                "species_taxid": 1824,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.4631,
                "matched_fragments": 362,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nocardia asteroides",
                "strain": "strain=DSM 43373",
                "accession": "GCA_900114685.1",
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                "species_taxid": 1824,
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                "validated": true,
                "ani": 77.4189,
                "matched_fragments": 363,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Mycolicibacterium vaccae",
                "strain": "strain=NBRC 14118",
                "accession": "GCA_001552715.1",
                "taxid": 1810,
                "species_taxid": 1810,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3058,
                "matched_fragments": 325,
                "total_fragments": 2011,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_017377795.1",
                "gtdb_species": "s__Williamsia sp017377795",
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                "matched_fragments": 2009,
                "total_fragments": 2011,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_002095395.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002095435.2",
                "gtdb_species": "s__Williamsia sp002095435",
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                "matched_fragments": 1585,
                "total_fragments": 2011,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.25",
                "min_intra_species_ani": "98.25",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_003217475.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCF_001598915.1",
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                "total_fragments": 2011,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia",
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                "mean_intra_species_ani": "98.29",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia",
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                "status": "-"
            },
            {
                "accession": "GCF_002735905.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia",
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            },
            {
                "accession": "GCA_003202005.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Williamsia",
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                "mean_intra_species_af": "0.90",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_011801125.1",
                "gtdb_species": "s__Nocardia brasiliensis_C",
                "ani": 77.2293,
                "matched_fragments": 375,
                "total_fragments": 2011,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Nocardia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.228,
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        "sporulation": 0.75,
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        "bacillus_cell_shape": 0.375,
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    "_genome_taxon": [
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}