{ "tc_result": [ { "organism_name": "Rhizobium petrolearium", "strain": "strain=DSM 26482", "accession": "GCA_017873175.1", "taxid": 515361, "species_taxid": 515361, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2293, "total_fragments": 2294, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Neorhizobium vignae", "strain": "strain=CCBAU 05176", "accession": "GCA_000732195.1", "taxid": 690585, "species_taxid": 690585, "relation_to_type": "type", "validated": true, "ani": 82.9597, "matched_fragments": 1272, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neorhizobium galegae", "strain": "strain=HAMBI 540", "accession": "GCA_000731315.1", "taxid": 399, "species_taxid": 399, "relation_to_type": "suspected-type", "validated": true, "ani": 82.7766, "matched_fragments": 1283, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neorhizobium alkalisoli", "strain": "strain=DSM 21826", "accession": "GCA_002968635.1", "taxid": 528178, "species_taxid": 528178, "relation_to_type": "type", "validated": true, "ani": 82.1132, "matched_fragments": 1115, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium populisoli", "strain": "strain=XQZ8", "accession": "GCA_019430945.1", "taxid": 2859785, "species_taxid": 2859785, "relation_to_type": "type", "validated": true, "ani": 81.8289, "matched_fragments": 1223, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neorhizobium huautlense", "strain": "strain=DSM 21817", "accession": "GCA_002968575.1", "taxid": 67774, "species_taxid": 67774, "relation_to_type": "type", "validated": true, "ani": 81.7849, "matched_fragments": 1125, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neorhizobium lilium", "strain": "strain=24NR", "accession": "GCA_004053875.1", "taxid": 2503024, "species_taxid": 2503024, "relation_to_type": "type", "validated": true, "ani": 79.8661, "matched_fragments": 784, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizobium smilacinae", "strain": "strain=PTYR-5", "accession": "GCA_006335145.1", "taxid": 1395944, "species_taxid": 1395944, "relation_to_type": "type", "validated": true, "ani": 79.8303, "matched_fragments": 824, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudorhizobium banfieldiae", "strain": "strain=NT-26", "accession": "GCA_000967425.1", "taxid": 1125847, "species_taxid": 1125847, "relation_to_type": "type", "validated": true, "ani": 79.5891, "matched_fragments": 679, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella yambaruensis", "strain": "strain=DSM 18801", "accession": "GCA_022899355.1", "taxid": 415996, "species_taxid": 415996, "relation_to_type": "type", "validated": true, "ani": 79.5571, "matched_fragments": 750, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ciceribacter ferrooxidans", "strain": "strain=F8825", "accession": "GCA_004137355.1", "taxid": 2509717, "species_taxid": 2509717, "relation_to_type": "type", "validated": true, "ani": 79.2482, "matched_fragments": 639, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ciceribacter thiooxidans", "strain": "strain=F43B", "accession": "GCA_014126615.1", "taxid": 1969821, "species_taxid": 1969821, "relation_to_type": "type", "validated": true, "ani": 79.1493, "matched_fragments": 624, "total_fragments": 2294, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_017873175.1", "gtdb_species": "s__Neorhizobium petrolearium", "ani": 100.0, "matched_fragments": 2293, "total_fragments": 2294, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Neorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.77", "min_intra_species_ani": "95.77", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_900177415.1", "gtdb_species": "s__Neorhizobium oryzae_A", "ani": 84.8236, "matched_fragments": 1318, "total_fragments": 2294, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Neorhizobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000282095.2", "gtdb_species": "s__Neorhizobium sp000282095", "ani": 83.1015, 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