{ "tc_result": [ { "organism_name": "Lederbergia galactosidilytica", "strain": "strain=DSM 15595", "accession": "GCA_017873565.1", "taxid": 217031, "species_taxid": 217031, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1561, "total_fragments": 1566, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Bacillus niameyensis", "strain": "strain=SIT3", "accession": "GCA_001375535.1", "taxid": 1522308, "species_taxid": 1522308, "relation_to_type": "type", "validated": true, "ani": 77.3507, "matched_fragments": 297, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cytobacillus solani", "strain": "strain=FJAT-18043", "accession": "GCA_001420595.1", "taxid": 1637975, "species_taxid": 1637975, "relation_to_type": "type", "validated": true, "ani": 77.169, "matched_fragments": 76, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lederbergia citrisecundus", "strain": "strain=FJAT-49732", "accession": "GCA_018343695.1", "taxid": 2833583, "species_taxid": 2833583, "relation_to_type": "type", "validated": true, "ani": 76.9731, "matched_fragments": 187, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lederbergia lenta", "strain": "strain=NCTC4824", "accession": "GCA_900478165.1", "taxid": 1467, "species_taxid": 1467, "relation_to_type": "type", "validated": true, "ani": 76.9035, "matched_fragments": 181, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lederbergia lenta", "strain": "strain=NBRC 16444", "accession": "GCA_001591545.1", "taxid": 1467, "species_taxid": 1467, "relation_to_type": "type", "validated": true, "ani": 76.8577, "matched_fragments": 179, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Heyndrickxia oleronia", "strain": "strain=DSM 9356", "accession": "GCA_017809215.1", "taxid": 38875, "species_taxid": 38875, "relation_to_type": "type", "validated": true, "ani": 76.7822, "matched_fragments": 96, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Heyndrickxia oleronia", "strain": "strain=DSM 9356", "accession": "GCA_025263665.1", "taxid": 38875, "species_taxid": 38875, "relation_to_type": "type", "validated": true, "ani": 76.6578, "matched_fragments": 96, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Metabacillus endolithicus", "strain": "strain=KCTC 33579", "accession": "GCA_023078335.1", "taxid": 1535204, "species_taxid": 1535204, "relation_to_type": "type", "validated": true, "ani": 76.5859, "matched_fragments": 56, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Heyndrickxia oleronia", "strain": "strain=DSM 9356", "accession": "GCA_002009555.1", "taxid": 38875, "species_taxid": 38875, "relation_to_type": "type", "validated": true, "ani": 76.5273, "matched_fragments": 87, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Litchfieldia alkalitelluris", "strain": "strain=DSM 16976", "accession": "GCA_002019645.1", "taxid": 304268, "species_taxid": 304268, "relation_to_type": "type", "validated": true, "ani": 76.3203, "matched_fragments": 64, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cytobacillus eiseniae", "strain": "strain=DSM 26675", "accession": "GCA_017874625.1", "taxid": 762947, "species_taxid": 762947, "relation_to_type": "type", "validated": true, "ani": 76.2718, "matched_fragments": 75, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Niallia circulans", "strain": "strain=NBRC 13626", "accession": "GCA_001591585.1", "taxid": 1397, "species_taxid": 1397, "relation_to_type": "suspected-type", "validated": true, "ani": 76.2628, "matched_fragments": 77, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bacillus massiliogorillae", "strain": "strain=G2", "accession": "GCA_000380245.2", "taxid": 1243664, "species_taxid": 1243664, "relation_to_type": "type", "validated": true, "ani": 75.8473, "matched_fragments": 60, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Margalitia camelliae", "strain": "strain=7578-1", "accession": "GCA_002844575.1", "taxid": 1707093, "species_taxid": 1707093, "relation_to_type": "type", "validated": true, "ani": 75.7823, "matched_fragments": 97, "total_fragments": 1566, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_017873565.1", "gtdb_species": "s__Lederbergia galactosidilytica", "ani": 100.0, "matched_fragments": 1561, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__Lederbergia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.35", "min_intra_species_ani": "99.18", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.93", "num_clustered_genomes": 4, "status": "conclusive" }, { "accession": "GCF_008764245.1", "gtdb_species": "s__Lederbergia ruris", "ani": 84.1238, "matched_fragments": 987, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__Lederbergia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.48", "min_intra_species_ani": "98.48", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_017355205.1", "gtdb_species": "s__Lederbergia sp017355205", "ani": 82.2386, "matched_fragments": 966, "total_fragments": 1566, "gtdb_taxonomy": 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"d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.54", "min_intra_species_ani": "99.49", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_007679095.1", "gtdb_species": "s__DE0126 sp007679095", "ani": 76.9834, "matched_fragments": 161, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__DE0126", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001591545.1", "gtdb_species": "s__Bacillus_AH lentus", "ani": 76.8692, "matched_fragments": 178, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__Bacillus_AH", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_017809215.1", "gtdb_species": "s__Heyndrickxia oleronia", "ani": 76.7703, "matched_fragments": 96, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__Heyndrickxia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.68", "min_intra_species_ani": "97.33", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCA_018333075.1", "gtdb_species": "s__Heyndrickxia sporothermodurans_A", "ani": 76.5507, "matched_fragments": 103, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__Heyndrickxia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002019645.1", "gtdb_species": "s__Litchfieldia alkalitelluris", "ani": 76.3203, "matched_fragments": 64, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_L;g__Litchfieldia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000518865.1", "gtdb_species": "s__Metabacillus sp000518865", "ani": 76.2605, "matched_fragments": 73, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Metabacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016107705.1", "gtdb_species": "s__Neobacillus cucumis_B", "ani": 76.1845, "matched_fragments": 67, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002019635.1", "gtdb_species": "s__Metabacillus halosaccharovorans", "ani": 76.1454, "matched_fragments": 76, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Metabacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.47", "min_intra_species_ani": "95.47", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_902374955.1", "gtdb_species": "s__Bacillus_AD massilioanorexius", "ani": 76.141, "matched_fragments": 53, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-1321;g__Bacillus_AD", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002844575.1", "gtdb_species": "s__Margalitia camelliae", "ani": 75.7823, "matched_fragments": 97, "total_fragments": 1566, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__Margalitia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.53", "min_intra_species_ani": "99.53", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" } ] }