{ "tc_result": [ { "organism_name": "Sphingobacterium tabacisoli", "strain": "strain=h337", "accession": "GCA_017908035.1", "taxid": 2044855, "species_taxid": 2044855, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1814, "total_fragments": 1814, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Sphingobacterium yanglingense", "strain": "strain=DSM 28353", "accession": "GCA_004363245.1", "taxid": 1437280, "species_taxid": 1437280, "relation_to_type": "type", "validated": true, "ani": 87.8779, "matched_fragments": 1266, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium paucimobilis", "strain": "strain=HER1398", "accession": "GCA_000416985.1", "taxid": 1385985, "species_taxid": 1385985, "relation_to_type": "type", "validated": true, "ani": 86.3238, "matched_fragments": 974, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium faecale", "strain": "strain=C459-1", "accession": "GCA_016746095.1", "taxid": 2803775, "species_taxid": 2803775, "relation_to_type": "type", "validated": true, "ani": 86.0313, "matched_fragments": 950, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium nematocida", "strain": "strain=DSM 24091", "accession": "GCA_900168125.1", "taxid": 1513896, "species_taxid": 1513896, "relation_to_type": "type", "validated": true, "ani": 80.6846, "matched_fragments": 678, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium cavernae", "strain": "strain=5.0403-2", "accession": "GCA_008520265.1", "taxid": 2592657, "species_taxid": 2592657, "relation_to_type": "type", "validated": true, "ani": 78.8871, "matched_fragments": 199, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium composti Ten et al. 2007 non Yoo et al. 2007", "strain": "strain=KCTC 12578", "accession": "GCA_009829075.1", "taxid": 363260, "species_taxid": 363260, "relation_to_type": "type", "validated": true, "ani": 78.3929, "matched_fragments": 198, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium endophyticum", "strain": "strain=NYYP31", "accession": "GCA_009733535.1", "taxid": 2546448, "species_taxid": 2546448, "relation_to_type": "type", "validated": true, "ani": 78.0344, "matched_fragments": 128, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium paramultivorum", "strain": "strain=w15", "accession": "GCA_009660355.1", "taxid": 2886510, "species_taxid": 2886510, "relation_to_type": "type", "validated": true, "ani": 77.6406, "matched_fragments": 134, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium corticibacterium", "strain": "strain=30C10-4-7", "accession": "GCA_004208525.1", "taxid": 2484746, "species_taxid": 2484746, "relation_to_type": "type", "validated": true, "ani": 77.5773, "matched_fragments": 119, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobacterium siyangense", "strain": "strain=CGMCC 1.6855", "accession": "GCA_007830445.1", "taxid": 459529, "species_taxid": 459529, "relation_to_type": "type", "validated": true, "ani": 77.5735, "matched_fragments": 134, "total_fragments": 1814, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_017908035.1", "gtdb_species": "s__Sphingobacterium tabacisoli", "ani": 100.0, "matched_fragments": 1814, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_004363245.1", "gtdb_species": "s__Sphingobacterium yanglingense", "ani": 87.876, "matched_fragments": 1266, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000416985.1", "gtdb_species": "s__Sphingobacterium paucimobilis", "ani": 86.3184, "matched_fragments": 975, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016746095.1", "gtdb_species": "s__Sphingobacterium sp016746095", "ani": 86.0029, "matched_fragments": 952, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011007365.1", "gtdb_species": "s__Sphingobacterium sp011007365", "ani": 81.2133, "matched_fragments": 619, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.58", "min_intra_species_ani": "99.33", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.93", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_900168125.1", "gtdb_species": "s__Sphingobacterium nematocida", "ani": 80.6966, "matched_fragments": 676, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008520265.1", "gtdb_species": "s__Sphingobacterium cavernae", "ani": 78.9133, "matched_fragments": 195, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 96.1642, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009829075.1", "gtdb_species": "s__Sphingobacterium composti", "ani": 78.3957, "matched_fragments": 195, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008274825.1", "gtdb_species": "s__Sphingobacterium hotanense", "ani": 78.3904, "matched_fragments": 123, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.82", "min_intra_species_ani": "97.82", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002245855.1", "gtdb_species": "s__Sphingobacterium cellulitidis", "ani": 78.1864, "matched_fragments": 139, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.02", "min_intra_species_ani": "97.95", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_009733535.1", "gtdb_species": "s__Sphingobacterium endophyticum", "ani": 78.0932, "matched_fragments": 124, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003610355.1", "gtdb_species": "s__Sphingobacterium detergens", "ani": 77.9551, "matched_fragments": 128, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002420705.1", "gtdb_species": "s__Sphingobacterium sp002420705", "ani": 77.915, "matched_fragments": 123, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002500745.1", "gtdb_species": "s__Sphingobacterium sp002500745", "ani": 77.7057, "matched_fragments": 110, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.61", "min_intra_species_ani": "98.61", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_007830445.1", "gtdb_species": "s__Sphingobacterium siyangense", "ani": 77.6167, "matched_fragments": 133, "total_fragments": 1814, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.51", "min_intra_species_ani": "95.59", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.78", "num_clustered_genomes": 14, "status": "-" } ] }