{ "type": "genome", "identifier": "GCF_017916255.1", "organism": "Streptomyces mobaraensis NBRC 13819 = DSM 40847", "title": "Streptomyces mobaraensis NBRC 13819 = DSM 40847", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Jiangxi Academy of Science", "publication": [ {} ], "properties": { "assembly_accession": "GCF_017916255.1", "bioproject": "PRJNA224116", "biosample": "SAMN18533550", "wgs_master": "na", "refseq_category": "na", "taxid": "1223523", "species_taxid": "35621", "organism_name": "Streptomyces mobaraensis NBRC 13819 = DSM 40847", "infraspecific_name": "strain=DSM 40847", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/04/13", "asm_name": "ASM1791625v1", "asm_submitter": "Jiangxi Academy of Science", "gbrs_paired_asm": "GCA_017916255.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/017/916/255/GCF_017916255.1_ASM1791625v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7574085", "genome_size_ungapped": "7574085", "gc_percent": "73.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-01-18", "total_gene_count": "6545", "protein_coding_gene_count": "6310", "non_coding_gene_count": "97", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-04-13", "dateModified": "2021-04-13", "datePublished": "2021-04-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces mobaraensis NBRC 13819 = DSM 40847" ], "sample_taxid": [ "1223523" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "2.006 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 9.38, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7574085", "Number of Sequences": "1", "Longest Sequences (bp)": "7574085", "N50 (bp)": "7574085", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "73.2", "Number of CDSs": "6623", "Average Protein Length": "332.8", "Coding Ratio (%)": "87.3", "Number of rRNAs": "21", "Number of tRNAs": "98", "Number of CRISPRs": "6" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptomyces mobaraensis", "strain": "strain=DSM 40847", "accession": "GCA_017916255.1", "taxid": 35621, 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces roseifaciens", "strain": "strain=MBT76", "accession": "GCA_001445655.1", "taxid": 1488406, "species_taxid": 1488406, "relation_to_type": "type", "validated": true, "ani": 83.5116, "matched_fragments": 1525, "total_fragments": 2524, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces eurocidicus", "strain": "strain=ATCC 27428", "accession": "GCA_002891295.1", "taxid": 66423, "species_taxid": 66423, "relation_to_type": "type", "validated": true, "ani": 83.4963, "matched_fragments": 1497, "total_fragments": 2524, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces eurocidicus", "strain": "strain=NRRL ISP-5604", "accession": "GCA_015475845.1", "taxid": 66423, "species_taxid": 66423, "relation_to_type": "type", "validated": true, "ani": 83.4279, "matched_fragments": 1496, "total_fragments": 2524, "ani_threshold": 95, "status": 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