{ "tc_result": [ { "organism_name": "Agromyces archimandritae", "strain": "strain=G127AT", "accession": "GCA_018024495.1", "taxid": 2781962, "species_taxid": 2781962, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1151, "total_fragments": 1151, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Agromyces lapidis", "strain": "strain=JCM 14321", "accession": "GCA_009749405.1", "taxid": 279574, "species_taxid": 279574, "relation_to_type": "type", "validated": true, "ani": 81.3176, "matched_fragments": 634, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mediolanus", "strain": "strain=JCM 3346", "accession": "GCA_014648575.1", "taxid": 41986, "species_taxid": 41986, "relation_to_type": "type", "validated": true, "ani": 81.2731, "matched_fragments": 646, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mariniharenae", "strain": "strain=NEAU-184", "accession": "GCA_008122505.1", "taxid": 2604423, "species_taxid": 2604423, "relation_to_type": "type", "validated": true, "ani": 81.1953, "matched_fragments": 629, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces tardus", "strain": "strain=SJ-23", "accession": "GCA_003710805.1", "taxid": 2583849, "species_taxid": 2583849, "relation_to_type": "type", "validated": true, "ani": 81.1214, "matched_fragments": 598, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces italicus", "strain": "strain=JCM 14320", "accession": "GCA_009749375.1", "taxid": 279572, "species_taxid": 279572, "relation_to_type": "type", "validated": true, "ani": 81.0938, "matched_fragments": 623, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces cerinus subsp. cerinus", "strain": "strain=DSM 8595", "accession": "GCA_900142065.1", "taxid": 232089, "species_taxid": 33878, "relation_to_type": "type", "validated": true, "ani": 81.0885, "matched_fragments": 637, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces italicus", "strain": "strain=DSM 16388", "accession": "GCA_000421545.1", "taxid": 279572, "species_taxid": 279572, "relation_to_type": "type", "validated": true, "ani": 81.0397, "matched_fragments": 634, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces bracchium", "strain": "strain=JCM 11433", "accession": "GCA_009709675.1", "taxid": 88376, "species_taxid": 88376, "relation_to_type": "type", "validated": true, "ani": 81.0165, "matched_fragments": 626, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces binzhouensis", "strain": "strain=CGMCC 4.7180", "accession": "GCA_004135055.1", "taxid": 1817495, "species_taxid": 1817495, "relation_to_type": "type", "validated": true, "ani": 80.9779, "matched_fragments": 441, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces protaetiae", "strain": "strain=FW100M-8", "accession": "GCA_004135405.1", "taxid": 2509455, "species_taxid": 2509455, "relation_to_type": "type", "validated": true, "ani": 80.9725, "matched_fragments": 587, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces agglutinans", "strain": "strain=CFH 90414", "accession": "GCA_009647605.1", "taxid": 2662258, "species_taxid": 2662258, "relation_to_type": "type", "validated": true, "ani": 80.9661, "matched_fragments": 626, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces marinus", "strain": "strain=DSM 26151", "accession": "GCA_021442325.1", "taxid": 1389020, "species_taxid": 1389020, "relation_to_type": "type", "validated": true, "ani": 80.914, "matched_fragments": 562, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces terreus", "strain": "strain=JCM 14581", "accession": "GCA_009749465.1", "taxid": 424795, "species_taxid": 424795, "relation_to_type": "type", "validated": true, "ani": 80.8988, "matched_fragments": 636, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces ramosus", "strain": "strain=DSM 43045", "accession": "GCA_004216665.1", "taxid": 33879, "species_taxid": 33879, "relation_to_type": "type", "validated": true, "ani": 80.8794, "matched_fragments": 627, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces luteolus", "strain": "strain=JCM 11431", "accession": "GCA_009729855.1", "taxid": 88373, "species_taxid": 88373, "relation_to_type": "type", "validated": true, "ani": 80.8667, "matched_fragments": 624, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces bauzanensis", "strain": "strain=CGMCC 1.8984", "accession": "GCA_014645655.1", "taxid": 1308924, "species_taxid": 1308924, "relation_to_type": "type", "validated": true, "ani": 80.7358, "matched_fragments": 571, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces flavus", "strain": "strain=CPCC 202695", "accession": "GCA_004366335.2", "taxid": 589382, "species_taxid": 589382, "relation_to_type": "type", "validated": true, "ani": 80.7053, "matched_fragments": 594, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces atrinae", "strain": "strain=DSM 23870", "accession": "GCA_013407835.1", "taxid": 592376, "species_taxid": 592376, "relation_to_type": "type", "validated": true, "ani": 80.0718, "matched_fragments": 521, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces atrinae", "strain": "strain=DSM 23870", "accession": "GCA_004134805.1", "taxid": 592376, "species_taxid": 592376, "relation_to_type": "type", "validated": true, "ani": 79.914, "matched_fragments": 536, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium oryzae", "strain": "strain=MB-10", "accession": "GCA_009735645.1", "taxid": 743009, "species_taxid": 743009, "relation_to_type": "type", "validated": true, "ani": 78.7256, "matched_fragments": 371, "total_fragments": 1151, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_018024495.1", "gtdb_species": "s__WSTA01 sp018024495", "ani": 100.0, "matched_fragments": 1151, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__WSTA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_014648575.1", "gtdb_species": "s__Agromyces mediolanus", "ani": 81.2508, "matched_fragments": 648, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008122505.1", "gtdb_species": "s__Agromyces sp008122505", "ani": 81.1306, "matched_fragments": 635, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003710805.1", "gtdb_species": "s__Agromyces tardus", "ani": 81.0932, "matched_fragments": 601, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000421545.1", "gtdb_species": "s__Agromyces italicus", "ani": 81.0609, "matched_fragments": 632, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001620055.1", "gtdb_species": "s__Agromyces sp001620055", "ani": 81.0556, "matched_fragments": 581, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009789225.1", "gtdb_species": "s__WSTA01 sp009789225", "ani": 80.9976, "matched_fragments": 612, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__WSTA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004135055.1", "gtdb_species": "s__Agromyces binzhouensis", "ani": 80.9834, "matched_fragments": 441, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004135405.1", "gtdb_species": "s__Agromyces protaetiae", "ani": 80.9704, "matched_fragments": 583, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009647605.1", "gtdb_species": "s__Agromyces sp009647605", "ani": 80.9579, "matched_fragments": 627, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009749465.1", "gtdb_species": "s__Agromyces terreus", "ani": 80.9123, "matched_fragments": 635, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004959775.1", "gtdb_species": "s__Agromyces sp004959775", "ani": 80.9069, "matched_fragments": 632, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006715355.1", "gtdb_species": "s__Agromyces sp006715355", "ani": 80.8836, "matched_fragments": 642, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004216665.1", "gtdb_species": "s__Agromyces ramosus", "ani": 80.8736, "matched_fragments": 628, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014645655.1", "gtdb_species": "s__Agromyces bauzanensis", "ani": 80.7556, "matched_fragments": 569, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001428255.1", "gtdb_species": "s__Agromyces sp001428255", "ani": 80.6863, "matched_fragments": 607, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009674665.1", "gtdb_species": "s__Agromyces kandeliae", "ani": 80.6635, "matched_fragments": 579, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013407835.1", "gtdb_species": "s__Agromyces_B atrinae", "ani": 80.0278, "matched_fragments": 525, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004570845.1", "gtdb_species": "s__Leifsonia_A flava", "ani": 79.4556, "matched_fragments": 502, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Leifsonia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.29", "min_intra_species_ani": "95.29", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" } ] }