{ "type": "genome", "identifier": "GCF_018274385.1", "organism": "Catenulispora pinistramenti", "title": "Catenulispora pinistramenti", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Nicolaus Copernicus University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_018274385.1", "bioproject": "PRJNA224116", "biosample": "SAMN13939710", "wgs_master": "JAAFYZ000000000.1", "refseq_category": "reference genome", "taxid": "2705254", "species_taxid": "2705254", "organism_name": "Catenulispora pinistramenti", "infraspecific_name": "strain=NL8", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/04", "asm_name": "ASM1827438v1", "asm_submitter": "Nicolaus Copernicus University", "gbrs_paired_asm": "GCA_018274385.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/018/274/385/GCF_018274385.1_ASM1827438v1", 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"below_threshold" }, { "organism_name": "Actinocrinis puniceicyclus", "strain": "strain=DSM 45618", "accession": "GCA_018283645.1", "taxid": 977794, "species_taxid": 977794, "relation_to_type": "type", "validated": true, "ani": 77.5503, "matched_fragments": 713, "total_fragments": 3544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces parmotrematis", "strain": "strain=Ptm05", "accession": "GCA_019890615.1", "taxid": 2873249, "species_taxid": 2873249, "relation_to_type": "type", "validated": true, "ani": 77.4352, "matched_fragments": 777, "total_fragments": 3544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces rubrisoli", "strain": "strain=DSM 42083", "accession": "GCA_024436055.1", "taxid": 1387313, "species_taxid": 1387313, "relation_to_type": "type", "validated": true, "ani": 77.2791, "matched_fragments": 684, "total_fragments": 3544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora setae", "strain": "strain=KM-6054", "accession": "GCA_000269985.1", "taxid": 2066, "species_taxid": 2066, "relation_to_type": "type", "validated": true, "ani": 76.9701, "matched_fragments": 1019, "total_fragments": 3544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces spinosus", "strain": "strain=SBTS01", "accession": "GCA_020400655.1", "taxid": 2872623, "species_taxid": 2872623, "relation_to_type": "type", "validated": true, "ani": 76.95, "matched_fragments": 830, "total_fragments": 3544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allostreptomyces psammosilenae", "strain": "strain=DSM 42178", "accession": "GCA_013407765.1", "taxid": 1892865, "species_taxid": 1892865, "relation_to_type": "type", "validated": true, "ani": 76.8699, "matched_fragments": 747, "total_fragments": 3544, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces klenkii", "strain": "strain=KCTC 29202", 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"N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013362315.1", "gtdb_species": "s__Catenulispora sp013362315", "ani": 82.9858, "matched_fragments": 1315, "total_fragments": 3544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Catenulisporaceae;g__Catenulispora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000720175.1", "gtdb_species": "s__Streptomyces sp000720175", "ani": 76.8197, "matched_fragments": 795, "total_fragments": 3544, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.69", "min_intra_species_ani": "95.67", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 3, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.119, "cell_length": -0.302, "doubling_h": null, "growth_tmp": 28.2, "optimum_tmp": 25.833, "optimum_ph": 5.833, "genome_size": 10467785.6, "gc_content": 69.8, "coding_genes": 8799.0, "rRNA16S_genes": 3.0, "tRNA_genes": 58.0, "gram_stain": 1.0, "sporulation": 1.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.666, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.333, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Catenulispora", "pinistramenti" ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }