{ "type": "genome", "identifier": "GCF_018304965.1", "organism": "Collimonas antrihumi", "title": "Collimonas antrihumi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Microbiology, Guangdong Academy of Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCF_018304965.1", "bioproject": "PRJNA224116", "biosample": "SAMN18721517", "wgs_master": "JAGQED000000000.1", "refseq_category": "reference genome", "taxid": "1940615", "species_taxid": "1940615", "organism_name": "Collimonas antrihumi", "infraspecific_name": "strain=DSM 104040", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/07", "asm_name": "ASM1830496v1", "asm_submitter": "Institute of Microbiology, Guangdong Academy of Sciences", "gbrs_paired_asm": "GCA_018304965.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/018/304/965/GCF_018304965.1_ASM1830496v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4722432", "genome_size_ungapped": "4722432", "gc_percent": "56.000000", "replicon_count": "0", "scaffold_count": "83", "contig_count": "83", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_018304965.1-RS_2024_05_06", "annotation_date": "2024-05-06", "total_gene_count": "4426", "protein_coding_gene_count": "4294", "non_coding_gene_count": "60", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-07", "dateModified": "2021-05-07", "datePublished": "2021-05-07", "_annotation": { "sample_count": 1, "sample_organism": [ "Collimonas antrihumi" ], "sample_taxid": [ "1940615" ], "sample_host_organism": [], 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"matched_fragments": 1073, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Collimonas pratensis", "strain": "strain=Ter91", "accession": "GCA_001584185.1", "taxid": 279113, "species_taxid": 279113, "relation_to_type": "type", "validated": true, "ani": 83.9212, "matched_fragments": 1045, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Collimonas arenae", "strain": "strain=Ter10", "accession": "GCA_001584165.1", "taxid": 279058, "species_taxid": 279058, "relation_to_type": "type", "validated": true, "ani": 83.1328, "matched_fragments": 962, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbaspirillum lusitanum", "strain": "strain=P6-12", "accession": "GCA_000256565.1", "taxid": 213312, "species_taxid": 213312, "relation_to_type": "type", "validated": true, "ani": 79.3403, "matched_fragments": 451, "total_fragments": 1534, "ani_threshold": 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