{ "type": "genome", "identifier": "GCF_018343525.1", "organism": "Lederbergia citrea", "title": "Lederbergia citrea", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Fujian Academy of Agricultural Sciences", "publication": [ {} ], "properties": { "assembly_accession": "GCF_018343525.1", "bioproject": "PRJNA224116", "biosample": "SAMN19008745", "wgs_master": "JAGYPH000000000.1", "refseq_category": "reference genome", "taxid": "2833581", "species_taxid": "2833581", "organism_name": "Lederbergia citrea", "infraspecific_name": "strain=FJAT-49754", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/11", "asm_name": "ASM1834352v1", "asm_submitter": "Fujian Academy of Agricultural Sciences", "gbrs_paired_asm": "GCA_018343525.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/018/343/525/GCF_018343525.1_ASM1834352v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4207523", "genome_size_ungapped": "4207503", "gc_percent": "38.500000", "replicon_count": "0", "scaffold_count": "8", "contig_count": "8", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_018343525.1-RS_2024_05_21", "annotation_date": "2024-05-21", "total_gene_count": "4186", "protein_coding_gene_count": "4006", "non_coding_gene_count": "109", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-11", "dateModified": "2021-05-11", "datePublished": "2021-05-11", "_annotation": { "sample_count": 1, "sample_organism": [ "Lederbergia citrea" ], "sample_taxid": [ "2833581" ], "sample_host_organism": [ "citrus" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"Bacillus acidicola", "strain": "strain=FJAT-2406", "accession": "GCA_001636425.1", "taxid": 209389, "species_taxid": 209389, "relation_to_type": "type", "validated": true, "ani": 78.1348, "matched_fragments": 96, "total_fragments": 1398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lederbergia lenta", "strain": "strain=NBRC 16444", "accession": "GCA_001591545.1", "taxid": 1467, "species_taxid": 1467, "relation_to_type": "type", "validated": true, "ani": 78.1016, "matched_fragments": 321, "total_fragments": 1398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesobacillus foraminis", "strain": "strain=CV53", "accession": "GCA_013618915.1", "taxid": 279826, "species_taxid": 279826, "relation_to_type": "type", "validated": true, "ani": 78.0709, "matched_fragments": 68, "total_fragments": 1398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Margalitia shackletonii", "strain": "strain=LMG 18435", "accession": 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77.1951, "matched_fragments": 124, "total_fragments": 1398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bacillus enclensis", "strain": "strain=SGD-1123", "accession": "GCA_900094975.1", "taxid": 1402860, "species_taxid": 1402860, "relation_to_type": "type", "validated": true, "ani": 77.1746, "matched_fragments": 61, "total_fragments": 1398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bacillus enclensis", "strain": "strain=SGD-1123", "accession": "GCA_001456935.1", "taxid": 1402860, "species_taxid": 1402860, "relation_to_type": "type", "validated": true, "ani": 77.1746, "matched_fragments": 61, "total_fragments": 1398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neobacillus piezotolerans", "strain": "strain=YLB-04", "accession": "GCA_003362805.1", "taxid": 2259171, "species_taxid": 2259171, "relation_to_type": "type", "validated": true, "ani": 77.1494, "matched_fragments": 50, "total_fragments": 1398, 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