{
    "type": "genome",
    "identifier": "GCF_018448885.1",
    "organism": "Photorhabdus caribbeanensis",
    "title": "Photorhabdus caribbeanensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Bern",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_018448885.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN10241664",
        "wgs_master": "RCWB00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1004165",
        "species_taxid": "1004165",
        "organism_name": "Photorhabdus caribbeanensis",
        "infraspecific_name": "strain=HG29",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/23",
        "asm_name": "ASM1844888v1",
        "asm_submitter": "University of Bern",
        "gbrs_paired_asm": "GCA_018448885.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/018/448/885/GCF_018448885.1_ASM1844888v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "5356249",
        "genome_size_ungapped": "5355886",
        "gc_percent": "42.500000",
        "replicon_count": "0",
        "scaffold_count": "181",
        "contig_count": "181",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_018448885.1-RS_2024_05_06",
        "annotation_date": "2024-05-06",
        "total_gene_count": "4749",
        "protein_coding_gene_count": "4424",
        "non_coding_gene_count": "123",
        "pubmed_id": "30688647"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-23",
    "dateModified": "2021-05-23",
    "datePublished": "2021-05-23",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Photorhabdus caribbeanensis"
        ],
        "sample_taxid": [
            "1004165"
        ],
        "sample_host_organism": [
            "Heterorhabditis"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Missing"
        ],
        "sample_host_location_id": [],
        "data_size": "1.514 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "5356249",
        "Number of Sequences": "181",
        "Longest Sequences (bp)": "397690",
        "N50 (bp)": "107369",
        "Gap Ratio (%)": "0.006777",
        "GCcontent (%)": "42.4",
        "Number of CDSs": "4412",
        "Average Protein Length": "320.3",
        "Coding Ratio (%)": "79.1",
        "Number of rRNAs": "7",
        "Number of tRNAs": "78",
        "Number of CRISPRs": "6"
    },
    "has_analysis": true,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            {
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                "accession": "GCA_000612035.1",
                "taxid": 2805098,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 94.877,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "species_taxid": 1208607,
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                "status": "below_threshold"
            },
            {
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Photorhabdus hainanensis",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Photorhabdus hindustanensis",
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                "accession": "GCA_002968995.1",
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                "status": "below_threshold"
            },
            {
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                "taxid": 1851568,
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                "ani_threshold": 95,
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            {
                "organism_name": "Photorhabdus laumondii subsp. laumondii",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Photorhabdus kayaii",
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                "taxid": 230088,
                "species_taxid": 230088,
                "relation_to_type": "type",
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                "ani": 92.1659,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Photorhabdus luminescens",
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                "status": "below_threshold"
            },
            {
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                "status": "below_threshold"
            },
            {
                "organism_name": "Photorhabdus kleinii",
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                "accession": "GCA_025384885.1",
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                "species_taxid": 768034,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Photorhabdus temperata",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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        ],
        "cc_result": {
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        "gtdb_result": [
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                "mean_intra_species_ani": "N/A",
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}