{ "type": "genome", "identifier": "GCF_018531495.1", "organism": "Nonomuraea sediminis", "title": "Nonomuraea sediminis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Chengdu University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_018531495.1", "bioproject": "PRJNA224116", "biosample": "SAMN19135704", "wgs_master": "JAHDTI000000000.1", "refseq_category": "reference genome", "taxid": "2835864", "species_taxid": "2835864", "organism_name": "Nonomuraea sediminis", "infraspecific_name": "strain=H16431", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/05/26", "asm_name": "ASM1853149v1", "asm_submitter": "Chengdu University", "gbrs_paired_asm": "GCA_018531495.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/018/531/495/GCF_018531495.1_ASM1853149v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "12091922", "genome_size_ungapped": "12091922", "gc_percent": "70.000000", "replicon_count": "0", "scaffold_count": "44", "contig_count": "44", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_018531495.1-RS_2024_08_29", "annotation_date": "2024-08-29", "total_gene_count": "11528", "protein_coding_gene_count": "11318", "non_coding_gene_count": "87", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-05-26", "dateModified": "2021-05-26", "datePublished": "2021-05-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Nonomuraea sediminis" ], "sample_taxid": [ "2835864" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], 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"below_threshold" }, { "organism_name": "Nonomuraea antri", "strain": "strain=NN258", "accession": "GCA_013283785.1", "taxid": 2730852, "species_taxid": 2730852, "relation_to_type": "type", "validated": true, "ani": 82.6397, "matched_fragments": 1976, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea cavernae", "strain": "strain=SYSU K10005", "accession": "GCA_020215905.1", "taxid": 2045107, "species_taxid": 2045107, "relation_to_type": "type", "validated": true, "ani": 82.5858, "matched_fragments": 1642, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea cavernae", "strain": "strain=CGMCC 4.7368", "accession": "GCA_014646355.1", "taxid": 2045107, "species_taxid": 2045107, "relation_to_type": "type", "validated": true, "ani": 82.5508, "matched_fragments": 1645, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea 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"accession": "GCA_014207745.1", "taxid": 1124761, "species_taxid": 1124761, "relation_to_type": "type", "validated": true, "ani": 82.423, "matched_fragments": 1854, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea basaltis", "strain": "strain=160415", "accession": "GCA_005893125.1", "taxid": 2495887, "species_taxid": 2495887, "relation_to_type": "type", "validated": true, "ani": 82.2799, "matched_fragments": 1971, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea endophytica", "strain": "strain=DSM 45385", "accession": "GCA_014203235.1", "taxid": 714136, "species_taxid": 714136, "relation_to_type": "type", "validated": true, "ani": 82.2148, "matched_fragments": 2087, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea glycinis", "strain": "strain=NEAU-BB2C19", "accession": "GCA_020215885.1", "taxid": 2047744, "species_taxid": 2047744, "relation_to_type": "type", "validated": true, "ani": 82.1258, "matched_fragments": 1726, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea aridisoli", "strain": "strain=KC333", "accession": "GCA_003236395.1", "taxid": 2070368, "species_taxid": 2070368, "relation_to_type": "type", "validated": true, "ani": 82.1177, "matched_fragments": 1649, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea glycinis", "strain": "strain=CGMCC 4.7430", "accession": "GCA_014646515.1", "taxid": 2047744, "species_taxid": 2047744, "relation_to_type": "type", "validated": true, "ani": 82.1043, "matched_fragments": 1718, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea africana", "strain": "strain=DSM 43748", "accession": "GCA_014873535.1", "taxid": 46171, "species_taxid": 46171, "relation_to_type": "type", "validated": true, "ani": 82.0606, "matched_fragments": 1883, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea phyllanthi", "strain": "strain=WYY166", "accession": "GCA_009497075.1", "taxid": 2219224, "species_taxid": 2219224, "relation_to_type": "type", "validated": true, "ani": 82.0451, "matched_fragments": 1892, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea typhae", "strain": "strain=p1410", "accession": "GCA_009760925.1", "taxid": 2603600, "species_taxid": 2603600, "relation_to_type": "type", "validated": true, "ani": 82.0362, "matched_fragments": 2061, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea harbinensis", "strain": "strain=CGMCC 4.7106", "accession": "GCA_019396385.1", "taxid": 1286938, "species_taxid": 1286938, "relation_to_type": "type", "validated": true, "ani": 81.9479, "matched_fragments": 1692, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea fuscirosea", "strain": "strain=CGMCC 4.7104", "accession": "GCA_003001935.1", "taxid": 1291556, "species_taxid": 1291556, "relation_to_type": "type", "validated": true, "ani": 81.8969, "matched_fragments": 1996, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea dietziae", "strain": "strain=DSM 44320", "accession": "GCA_014195505.1", "taxid": 65515, "species_taxid": 65515, "relation_to_type": "type", "validated": true, "ani": 81.8591, "matched_fragments": 1922, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerisporangium krabiense", "strain": "strain=NBRC 107571", "accession": "GCA_016863355.1", "taxid": 763782, "species_taxid": 763782, "relation_to_type": "type", "validated": true, "ani": 79.2248, "matched_fragments": 1346, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerisporangium krabiense", "strain": "strain=DSM 45790", "accession": "GCA_014200435.1", "taxid": 763782, "species_taxid": 763782, "relation_to_type": "type", "validated": true, "ani": 79.186, "matched_fragments": 1369, "total_fragments": 4011, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 7.99, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_018531495.1", "gtdb_species": "s__Nonomuraea sp018531495", "ani": 100.0, "matched_fragments": 3998, "total_fragments": 4011, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Nonomuraea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_013362835.1", "gtdb_species": "s__Nonomuraea sp013362835", "ani": 83.4517, "matched_fragments": 869, "total_fragments": 4011, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Nonomuraea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013363975.1", "gtdb_species": "s__Nonomuraea montanisoli", "ani": 82.7546, "matched_fragments": 1932, "total_fragments": 4011, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptosporangiales;f__Streptosporangiaceae;g__Nonomuraea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018603905.1", 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