{ "tc_result": [ { "organism_name": "Polymorphobacter fuscus", "strain": "strain=D40P", "accession": "GCA_009607675.1", "taxid": 1439888, "species_taxid": 1439888, "relation_to_type": "type", "validated": true, "ani": 78.0414, "matched_fragments": 380, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polymorphobacter fuscus", "strain": "strain=D40P", "accession": "GCA_009372075.1", "taxid": 1439888, "species_taxid": 1439888, "relation_to_type": "type", "validated": true, "ani": 78.0224, "matched_fragments": 382, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polymorphobacter fuscus", "strain": "strain=DSM 105347", "accession": "GCA_011927825.1", "taxid": 1439888, "species_taxid": 1439888, "relation_to_type": "type", "validated": true, "ani": 77.9567, "matched_fragments": 393, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polymorphobacter glacialis", "strain": "strain=CGMCC 1.15519", "accession": "GCA_014643455.1", "taxid": 1614636, "species_taxid": 1614636, "relation_to_type": "type", "validated": true, "ani": 77.9001, "matched_fragments": 371, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polymorphobacter multimanifer", "strain": "strain=JCM 18140", "accession": "GCA_014647295.1", "taxid": 1070431, "species_taxid": 1070431, "relation_to_type": "type", "validated": true, "ani": 77.7768, "matched_fragments": 278, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polymorphobacter multimanifer", "strain": "strain=DSM 102189", "accession": "GCA_014205635.1", "taxid": 1070431, "species_taxid": 1070431, "relation_to_type": "type", "validated": true, "ani": 77.7312, "matched_fragments": 300, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas taxi", "strain": "strain=ATCC 55669", "accession": "GCA_000764535.1", "taxid": 1549858, "species_taxid": 1549858, "relation_to_type": "type", "validated": true, "ani": 77.5, "matched_fragments": 389, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingopyxis solisilvae", "strain": "strain=R366", "accession": "GCA_015475875.1", "taxid": 1886788, "species_taxid": 1886788, "relation_to_type": "type", "validated": true, "ani": 77.2937, "matched_fragments": 238, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas yunnanensis", "strain": "strain=YIM 3", "accession": "GCA_019898765.1", "taxid": 310400, "species_taxid": 310400, "relation_to_type": "type", "validated": true, "ani": 77.285, "matched_fragments": 372, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingopyxis soli", "strain": "strain=BL03", "accession": "GCA_018682675.1", "taxid": 592051, "species_taxid": 592051, "relation_to_type": "type", "validated": true, "ani": 77.2619, "matched_fragments": 274, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=DSM 100060", "accession": "GCA_011762145.1", "taxid": 1344951, "species_taxid": 1344951, "relation_to_type": "type", "validated": true, "ani": 77.2468, "matched_fragments": 361, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=KIS18-15", "accession": "GCA_004792695.1", "taxid": 1344951, "species_taxid": 1344951, "relation_to_type": "type", "validated": true, "ani": 77.2365, "matched_fragments": 356, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas folli", "strain": "strain=RHCKR7", "accession": "GCA_019429525.1", "taxid": 2862497, "species_taxid": 2862497, "relation_to_type": "type", "validated": true, "ani": 77.189, "matched_fragments": 409, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas citri", "strain": "strain=RRHST34", "accession": "GCA_019429485.1", "taxid": 2862499, "species_taxid": 2862499, "relation_to_type": "type", "validated": true, "ani": 77.1827, "matched_fragments": 407, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas parva", "strain": "strain=17J27-24", "accession": "GCA_004564275.1", "taxid": 2555898, "species_taxid": 2555898, "relation_to_type": "type", "validated": true, "ani": 77.152, "matched_fragments": 288, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingopyxis macrogoltabida", "strain": "strain=203", "accession": "GCA_001314325.1", "taxid": 33050, "species_taxid": 33050, "relation_to_type": "type", "validated": true, "ani": 77.1186, "matched_fragments": 331, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aracearum", "strain": "strain=WZY 27", "accession": "GCA_003345355.1", "taxid": 2283317, "species_taxid": 2283317, "relation_to_type": "type", "validated": true, "ani": 77.0508, "matched_fragments": 240, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium kunmingense", "strain": "strain=CGMCC 1.12274", "accession": "GCA_002813245.1", "taxid": 1211806, "species_taxid": 1211806, "relation_to_type": "type", "validated": true, "ani": 76.9658, "matched_fragments": 195, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas profundi", "strain": "strain=LMO-1", "accession": "GCA_009739515.1", "taxid": 2681549, "species_taxid": 2681549, "relation_to_type": "type", "validated": true, "ani": 76.9517, "matched_fragments": 307, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingopyxis italica", "strain": "strain=DSM 25229", "accession": "GCA_011926545.1", "taxid": 1129133, "species_taxid": 1129133, "relation_to_type": "type", "validated": true, "ani": 76.9413, "matched_fragments": 295, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Novosphingobium huizhouense", "strain": "strain=c7", "accession": "GCA_020179475.1", "taxid": 2866625, "species_taxid": 2866625, "relation_to_type": "type", "validated": true, "ani": 76.9047, "matched_fragments": 285, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas jejuensis", "strain": "strain=DSM 27651", "accession": "GCA_011927695.1", "taxid": 904715, "species_taxid": 904715, "relation_to_type": "type", "validated": true, "ani": 76.8306, "matched_fragments": 220, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingopyxis flava", "strain": "strain=R11H", "accession": "GCA_900168005.1", "taxid": 1507287, "species_taxid": 1507287, "relation_to_type": "type", "validated": true, "ani": 76.5706, "matched_fragments": 187, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Endobacter medicaginis", "strain": "strain=LMG 26838", "accession": "GCA_013376135.1", "taxid": 1181271, "species_taxid": 1181271, "relation_to_type": "type", "validated": true, "ani": 76.1168, "matched_fragments": 97, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus aeridis", "strain": "strain=JC501", "accession": "GCA_004923205.2", "taxid": 1966466, "species_taxid": 1966466, "relation_to_type": "type", "validated": true, "ani": 76.0375, "matched_fragments": 131, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Endobacter medicaginis", "strain": "strain=CECT 8088", "accession": "GCA_014192375.1", "taxid": 1181271, "species_taxid": 1181271, "relation_to_type": "type", "validated": true, "ani": 75.8239, "matched_fragments": 140, "total_fragments": 1630, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_018982885.1", "gtdb_species": "s__CAHJWT01 sp018982885", "ani": 99.9627, "matched_fragments": 1562, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__CAHJWT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_903643075.1", "gtdb_species": "s__CAHJWT01 sp903643075", "ani": 82.4958, "matched_fragments": 451, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__CAHJWT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903642255.1", "gtdb_species": "s__CAHJWT01 sp903642255", "ani": 82.2995, "matched_fragments": 447, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__CAHJWT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_019245455.1", "gtdb_species": "s__CAHJWT01 sp019245455", "ani": 81.0632, "matched_fragments": 496, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__CAHJWT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018982925.1", "gtdb_species": "s__Glacieibacterium sp018982925", "ani": 80.1464, "matched_fragments": 622, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Glacieibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007097155.1", "gtdb_species": "s__Glacieibacterium frigidum", "ani": 79.8322, "matched_fragments": 566, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Glacieibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004681125.1", "gtdb_species": "s__Polymorphobacter_A arshaanensis", "ani": 78.8349, "matched_fragments": 385, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Polymorphobacter_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003241875.1", "gtdb_species": "s__Polymorphobacter sp003241875", "ani": 78.0841, "matched_fragments": 424, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Polymorphobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014643455.1", "gtdb_species": "s__Polymorphobacter glacialis", "ani": 77.8917, "matched_fragments": 372, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Polymorphobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014204695.1", "gtdb_species": "s__Sphingomonas sp001897045", "ani": 77.0721, "matched_fragments": 372, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.82", "min_intra_species_ani": "96.97", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.83", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_019075875.1", "gtdb_species": "s__Novosphingobium sp019075875", "ani": 77.0015, "matched_fragments": 274, "total_fragments": 1630, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }