# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_11	LOCUS_00110	sequence1:13881..14108(-)	internal_stop_codon	14130..14132(-)		WP_002894328.1	phosphoribosylaminoimidazolesuccinocarboxamide synthase	100.0	31.9	97.3
MGA_12	LOCUS_00120	sequence1:14130..14588(-)	internal_stop_codon	14130..14132(-)		WP_002894328.1	phosphoribosylaminoimidazolesuccinocarboxamide synthase	100.0	64.7	92.8
MGA_143	LOCUS_01410	sequence1:152331..155504(+)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	83.4	65.2	47.2
MGA_152	LOCUS_01500	sequence1:163473..174359(+)	partial			WP_002379133.1	isopeptide-forming domain-containing fimbrial protein	14.8	55.3	25.1
MGA_153	LOCUS_01510	sequence1:174436..177333(+)	partial			WP_000679939.1	LPXTG-anchored beta-N-acetylhexosaminidase StrH	27.3	18.6	27.5
MGA_214	LOCUS_02110	sequence1:232974..235208(+)	partial			WP_000762954.1	DUF262 domain-containing protein	39.9	48.7	29.9
MGA_327	LOCUS_03240	sequence1:342883..343446(-)	partial			WP_011837195.1	glycoside hydrolase family 25 protein	98.4	64.6	79.3
MGA_334	LOCUS_03310	sequence1:351263..351403(+)	partial			WP_002895990.1	DUF1146 family protein	95.7	57.9	70.5
MGA_359	LOCUS_03560	sequence1:380481..380618(-)	partial			WP_002897213.1	SPJ_0845 family protein	71.1	71.1	84.4
MGA_371	LOCUS_03680	sequence1:394969..395703(+)	internal_stop_codon	394858..394860(+)		WP_011836887.1	hypothetical protein	99.2	78.2	47.3
MGA_378	LOCUS_03750	sequence1:400736..401143(-)	partial			WP_011836891.1	hypothetical protein	60.0	58.0	50.0
MGA_402	LOCUS_03990	sequence1:425408..426439(+)	partial			WP_011837031.1	hypothetical protein	49.0	23.9	36.9
MGA_419	LOCUS_04160	sequence1:438629..439501(-)	partial			WP_000771154.1	choline-binding protein CbpC	66.2	57.2	37.0
MGA_421	LOCUS_04180	sequence1:442526..443953(+)	partial			WP_011837024.1	hypothetical protein	65.7	49.1	50.3
MGA_436	LOCUS_04330	sequence1:468397..469110(+)	partial			WP_012775191.1	hypothetical protein	43.5	68.5	29.1
MGA_462	LOCUS_04590	sequence1:491087..491413(+)	partial			WP_011861830.1	helix-turn-helix transcriptional regulator	68.5	53.2	49.3
MGA_475	LOCUS_04720	sequence1:504263..505936(+)	partial			WP_001083683.1	AAA family ATPase	72.0	70.2	80.0
MGA_487	LOCUS_04840	sequence1:514979..515674(-)	partial			WP_002390049.1	IS6-like element ISS1N family transposase	46.8	47.8	95.4
MGA_488	LOCUS_04850	sequence1:515747..516220(+)	internal_stop_codon	515708..515710(+)		WP_000557779.1	nicotinamide riboside transporter PnuC	98.7	57.8	95.5
MGA_528	LOCUS_05250	sequence1:570882..571190(+)	partial			WP_011836739.1	accessory Sec-dependent serine-rich glycoprotein adhesin	91.2	7.1	33.9
MGA_529	LOCUS_05260	sequence1:571529..573577(+)	partial			WP_011836740.1	SP_1767 family glycosyltransferase	97.9	62.3	90.1
MGA_532	LOCUS_05290	sequence1:575862..577172(+)	internal_stop_codon	577170..577172(+)		WP_011836743.1	accessory Sec system protein Asp1	100.0	82.9	75.7
MGA_533	LOCUS_05300	sequence1:577248..577442(+)	internal_stop_codon	577170..577172(+)		WP_011836743.1	accessory Sec system protein Asp1	100.0	12.2	76.6
MGA_552	LOCUS_05490	sequence1:594286..594408(+)	internal_stop_codon	594697..594699(+),594406..594408(+)		WP_000074744.1	MFS transporter	100.0	9.6	77.5
MGA_553	LOCUS_05500	sequence1:594457..594699(+)	internal_stop_codon	594697..594699(+),594406..594408(+),594778..594780(+)		WP_010922401.1	MFS transporter	96.2	19.0	81.8
MGA_554	LOCUS_05510	sequence1:594829..595533(+)	internal_stop_codon	594697..594699(+),594778..594780(+)		WP_010922401.1	MFS transporter	96.2	55.2	77.3
MGA_572	LOCUS_05690	sequence1:611152..611289(+)	frameshift,internal_stop_codon	611300..611302(+),611327..611329(+),611279..611281(+)	611238	WP_011837121.1	8-oxo-dGTP diphosphatase	82.2	23.7	94.6
MGA_573	LOCUS_05700	sequence1:611402..611617(+)	frameshift,internal_stop_codon	611300..611302(+),611615..611617(+),611327..611329(+),611279..611281(+)	611238	WP_011837121.1	8-oxo-dGTP diphosphatase	100.0	45.5	94.4
MGA_574	LOCUS_05710	sequence1:611862..612530(+)	internal_stop_codon	611712..611714(+)		WP_002904720.1	ZIP family manganese transporter TmpA	100.0	81.0	90.5
MGA_633	LOCUS_06300	sequence1:665873..666616(+)	partial			WP_011837336.1	hypothetical protein	83.0	40.5	36.1
MGA_634	LOCUS_06310	sequence1:666508..667197(+)	frameshift		666491,666254	WP_002917397.1	hypothetical protein	96.5	48.7	66.7
MGA_664	LOCUS_06610	sequence1:695947..696138(+)	partial			WP_002904664.1	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	87.3	32.0	94.5
MGA_700	LOCUS_06970	sequence1:734254..734412(-)	internal_stop_codon	734254..734256(-),734437..734439(-)		WP_140860145.1	IS3 family transposase	100.0	11.6	90.4
MGA_701	LOCUS_06980	sequence1:734437..734862(-)	frameshift,internal_stop_codon	734435..734437(-),734252..734254(-)	734833,734854	WP_162837466.1	IS3-like element IS861 family transposase	93.6	29.5	66.7
MGA_702	LOCUS_06990	sequence1:734831..735289(-)	frameshift		734854	WP_081026662.1	IS3 family transposase	92.1	59.8	73.6
MGA_736	LOCUS_07330	sequence1:774550..775770(-)	partial			WP_011836928.1	YSIRK signal domain/LPXTG anchor domain surface protein	93.1	69.5	69.5
MGA_748	LOCUS_07450	sequence1:786694..786903(-)	internal_stop_codon	787003..787005(-)		WP_109983297.1	IS200/IS605 family transposase	97.1	42.1	77.6
MGA_749	LOCUS_07460	sequence1:787619..793237(-)	partial			WP_011836786.1	CshA/CshB family fibrillar adhesin-related protein	12.6	7.9	49.4
MGA_761	LOCUS_07580	sequence1:803455..804108(-)	frameshift,internal_stop_codon	803455..803457(-)	804145	WP_011836975.1	PRD domain-containing protein	99.5	77.5	71.4
MGA_762	LOCUS_07590	sequence1:804143..804274(-)	frameshift		804145	WP_011836975.1	PRD domain-containing protein	100.0	15.4	83.7
MGA_795	LOCUS_07920	sequence1:832773..832931(-)	partial			WP_011836998.1	NUDIX hydrolase	73.1	27.5	71.1
MGA_826	LOCUS_08230	sequence1:866965..867483(-)	partial			WP_011459566.1	TlpA disulfide reductase family protein	75.6	64.3	36.2
MGA_833	LOCUS_08300	sequence1:873799..873975(-)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_865	LOCUS_08620	sequence1:905455..906102(-)	frameshift		905472	WP_011459674.1	alpha/beta hydrolase	96.7	79.9	33.8
MGA_897	LOCUS_08940	sequence1:939071..939934(+)	partial			WP_002985634.1	quorum-sensing system transcriptional regulator Rgg3	69.0	69.6	22.8
MGA_899	LOCUS_08960	sequence1:941818..942327(-)	internal_stop_codon	942436..942438(-)		WP_000900020.1	ADP-ribosylglycohydrolase family protein	98.2	58.5	86.7
MGA_900	LOCUS_08970	sequence1:942436..942672(-)	internal_stop_codon	942436..942438(-)		WP_000900020.1	ADP-ribosylglycohydrolase family protein	100.0	27.5	87.2
MGA_902	LOCUS_08990	sequence1:943435..943563(-)	partial			WP_000900005.1	ADP-ribosylglycohydrolase family protein	88.1	13.0	100.0
MGA_906	LOCUS_09030	sequence1:946174..946893(-)	internal_stop_codon	946174..946176(-)		WP_011837152.1	phosphotransferase	100.0	81.8	88.3
MGA_931	LOCUS_09280	sequence1:973530..974354(-)	partial			WP_000048867.1	LPXTG cell wall anchor domain-containing protein	56.6	60.8	31.7
MGA_950	LOCUS_09470	sequence1:988732..990495(-)	partial			WP_196792563.1	LPXTG cell wall anchor domain-containing protein	55.0	38.6	24.3
MGA_954	LOCUS_09510	sequence1:992960..993361(-)	partial			WP_000150277.1	ROK family protein	48.1	21.8	89.1
MGA_1002	LOCUS_09990	sequence1:1042471..1045644(-)	partial			WP_011476404.1	Xaa-Pro dipeptidyl-peptidase	61.1	76.8	29.4
MGA_1099	LOCUS_10960	sequence1:1144830..1145495(-)	partial			WP_001204631.1	PoNi-like cognate immunity protein	97.3	57.8	26.2
MGA_1100	LOCUS_10970	sequence1:1145511..1145972(-)	partial			WP_000056125.1	T7SS effector LXG polymorphic toxin	93.5	27.0	31.7
MGA_1135	LOCUS_11320	sequence1:1174200..1174463(-)	partial			WP_011837294.1	DUF6287 domain-containing protein	92.0	19.0	65.0
MGA_1136	LOCUS_11330	sequence1:1174469..1175005(-)	partial			WP_011837294.1	DUF6287 domain-containing protein	84.3	32.8	42.0
MGA_1139	LOCUS_11360	sequence1:1178286..1178552(-)	partial			WP_002899814.1	DUF421 domain-containing protein	62.5	26.2	70.9
MGA_1177	LOCUS_11740	sequence1:1213498..1213701(-)	partial			WP_002900787.1	helix-turn-helix transcriptional regulator	100.0	62.0	83.6
MGA_1178	LOCUS_11750	sequence1:1213713..1213907(-)	frameshift,internal_stop_codon	1214039..1214041(-)	1214023	WP_120719250.1	hypothetical protein	93.8	43.8	56.7
MGA_1256	LOCUS_12530	sequence1:1301844..1303928(-)	partial			WP_002382226.1	SpaA isopeptide-forming pilin-related protein	73.3	81.1	35.9
MGA_1259	LOCUS_12560	sequence1:1308602..1309027(-)	frameshift		1309086	WP_011921815.1	PTS system trehalose-specific EIIBC component	98.6	20.9	71.2
MGA_1260	LOCUS_12570	sequence1:1309066..1310610(-)	frameshift		1309083	WP_011921815.1	PTS system trehalose-specific EIIBC component	97.5	75.8	80.7
MGA_1288	LOCUS_12850	sequence1:1336523..1336837(+)	frameshift		1336798	WP_000136861.1	PTS system mannose/fructose/sorbose family transporter subunit IID	88.5	30.4	93.5
MGA_1289	LOCUS_12860	sequence1:1336834..1337436(+)	frameshift		1336798	WP_000136861.1	PTS system mannose/fructose/sorbose family transporter subunit IID	100.0	66.0	84.5
MGA_1384	LOCUS_13800	sequence1:1446354..1447934(-)	partial			WP_011837107.1	ATP-binding protein	54.0	52.5	51.0
MGA_1388	LOCUS_13840	sequence1:1451546..1451845(+)	internal_stop_codon	1451843..1451845(+)		WP_004193558.1	isoprenylcysteine carboxylmethyltransferase family protein	100.0	52.9	93.9
MGA_1428	LOCUS_14240	sequence1:1496574..1496876(-)	frameshift		1496856,1496853	WP_011836383.1	NUDIX hydrolase	92.0	61.3	85.9
MGA_1429	LOCUS_14250	sequence1:1496845..1497024(-)	frameshift		1496856,1496853	WP_011836383.1	NUDIX hydrolase	94.9	37.3	87.5
MGA_1434	LOCUS_14300	sequence1:1500626..1501603(-)	partial			WP_003063994.1	hypothetical protein	65.5	70.4	31.4
MGA_1463	LOCUS_14590	sequence1:1532880..1533983(-)	partial			WP_002356656.1	SPFH domain-containing protein	73.8	63.9	30.0
MGA_1475	LOCUS_14710	sequence1:1547110..1547517(-)	partial			WP_011836516.1	ABC transporter permease	100.0	25.2	85.9
MGA_1521	LOCUS_15170	sequence1:1589240..1589671(-)	partial			WP_000265622.1	competence type IV pilus minor pilin ComGG	72.7	73.0	47.1
MGA_1534	LOCUS_15300	sequence1:1606290..1606835(-)	partial			WP_002901757.1	DUF6287 domain-containing protein	67.4	61.0	60.7
MGA_1535	LOCUS_15310	sequence1:1606932..1607543(-)	partial			WP_002263334.1	DUF6287 domain-containing protein	66.0	72.8	29.6
MGA_1559	LOCUS_15540	sequence1:1637285..1637599(-)	partial			WP_002983650.1	DNA-directed RNA polymerase subunit omega	62.5	61.9	93.8
MGA_1595	LOCUS_15900	sequence1:1677883..1678281(-)	partial			WP_002239757.1	hypothetical protein	84.8	60.2	28.9
MGA_1596	LOCUS_15910	sequence1:1678432..1679643(-)	partial			WP_012027693.1	restriction endonuclease subunit S	51.6	52.9	36.4
MGA_1673	LOCUS_16680	sequence1:1760169..1760477(-)	partial			WP_024265752.1	putative quinol monooxygenase	96.1	72.5	36.7
MGA_1727	LOCUS_17220	sequence1:1816004..1816627(-)	internal_stop_codon	1816646..1816648(-)		WP_011837485.1	CPBP family glutamic-type intramembrane protease	100.0	83.1	85.5
MGA_1770	LOCUS_17650	sequence1:1868938..1869720(-)	partial			WP_000147505.1	DUF389 domain-containing protein	100.0	74.5	91.2
MGA_1773	LOCUS_17680	sequence1:1872909..1873724(+)	partial			WP_205010568.1	tyrosine-type recombinase/integrase	100.0	66.9	84.5
MGA_1792	LOCUS_17870	sequence1:1892933..1893592(+)	partial			WP_000823931.1	DNA/RNA non-specific endonuclease	23.3	13.6	62.7
MGA_1815	LOCUS_18100	sequence1:1916735..1921219(-)	partial			WP_011837426.1	S8 family serine peptidase	74.3	73.2	37.4
MGA_1816	LOCUS_18110	sequence1:1921304..1925551(-)	partial			WP_001093389.1	S8 family serine peptidase	80.3	73.0	36.2
MGA_1833	LOCUS_18280	sequence1:1944125..1944364(-)	partial			WP_011837083.1	serine hydrolase domain-containing protein	75.9	10.1	75.0
MGA_1851	LOCUS_18460	sequence1:1961412..1961642(-)	partial			WP_011836473.1	beta-glucoside-specific PTS transporter subunit IIABC	92.1	10.9	98.6
MGA_1853	LOCUS_18480	sequence1:1963290..1963976(-)	partial			WP_135783035.1	DUF4947 domain-containing protein	73.7	83.9	30.9
MGA_1858	LOCUS_18530	sequence1:1968230..1968361(+)	partial			WP_000199548.1	NADP-specific glutamate dehydrogenase	100.0	9.6	88.4
MGA_1899	LOCUS_18940	sequence1:2011518..2011826(-)	partial			WP_002263021.1	hypothetical protein	98.0	47.9	39.6
MGA_1909	LOCUS_19040	sequence1:2018726..2019508(-)	frameshift,internal_stop_codon	2019610..2019612(-)	2019519	WP_076996129.1	IS1182 family transposase	100.0	53.5	70.1
MGA_1910	LOCUS_19050	sequence1:2019610..2020176(-)	frameshift,internal_stop_codon	2019610..2019612(-)	2019522	WP_184006649.1	IS1182 family transposase	100.0	39.2	72.9
MGA_1924	LOCUS_19190	sequence1:2042312..2042851(-)	partial			WP_011837558.1	hypothetical protein	69.8	80.5	41.3
MGA_1941	LOCUS_19360	sequence1:2057520..2057654(-)	partial			WP_000831905.1	50S ribosomal protein L34	59.1	59.1	96.2
