{ "type": "genome", "identifier": "GCF_019049655.1", "organism": "Rahnella rivi", "title": "Rahnella rivi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of the West of England", "publication": [ {} ], "properties": { "assembly_accession": "GCF_019049655.1", "bioproject": "PRJNA224116", "biosample": "SAMN18121102", "wgs_master": "JAFMOX000000000.1", "refseq_category": "reference genome", "taxid": "2816249", "species_taxid": "2816249", "organism_name": "Rahnella rivi", "infraspecific_name": "strain=FC061912-K", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/06/28", "asm_name": "ASM1904965v1", "asm_submitter": "University of the West of England", "gbrs_paired_asm": "GCA_019049655.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/019/049/655/GCF_019049655.1_ASM1904965v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5493809", "genome_size_ungapped": "5493809", "gc_percent": "53.000000", "replicon_count": "0", "scaffold_count": "67", "contig_count": "67", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_019049655.1-RS_2024_03_27", "annotation_date": "2024-03-27", "total_gene_count": "5095", "protein_coding_gene_count": "4915", "non_coding_gene_count": "101", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-06-28", "dateModified": "2021-06-28", "datePublished": "2021-06-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Rahnella rivi" ], "sample_taxid": [ "2816249" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: New York" ], 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"conclusive" }, { "organism_name": "Rahnella inusitata", "strain": "strain=DSM 30078", "accession": "GCA_003602055.1", "taxid": 58169, "species_taxid": 58169, "relation_to_type": "type", "validated": true, "ani": 87.99, "matched_fragments": 1391, "total_fragments": 1804, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rahnella inusitata", "strain": "strain=DSM 30078", "accession": "GCA_003263515.1", "taxid": 58169, "species_taxid": 58169, "relation_to_type": "type", "validated": true, "ani": 87.9299, "matched_fragments": 1385, "total_fragments": 1804, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rahnella victoriana", "strain": "strain=DSM 27397", "accession": "GCA_004330295.1", "taxid": 1510570, "species_taxid": 1510570, "relation_to_type": "type", "validated": true, "ani": 86.4255, "matched_fragments": 1326, "total_fragments": 1804, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rahnella variigena", "strain": 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