{ "type": "genome", "identifier": "GCF_019145475.1", "organism": "Pseudomonas botevensis", "title": "Pseudomonas botevensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "KU Leuven", "publication": [ {} ], "properties": { "assembly_accession": "GCF_019145475.1", "bioproject": "PRJNA224116", "biosample": "SAMN19473668", "wgs_master": "JAHTKI000000000.1", "refseq_category": "reference genome", "taxid": "2842352", "species_taxid": "2842352", "organism_name": "Pseudomonas botevensis", "infraspecific_name": "strain=COW3", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/07/06", "asm_name": "ASM1914547v1", "asm_submitter": "KU Leuven", "gbrs_paired_asm": "GCA_019145475.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/019/145/475/GCF_019145475.1_ASM1914547v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6448667", "genome_size_ungapped": "6448667", "gc_percent": "61.000000", "replicon_count": "0", "scaffold_count": "55", "contig_count": "55", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_019145475.1-RS_2024_11_18", "annotation_date": "2024-11-18", "total_gene_count": "5881", "protein_coding_gene_count": "5749", "non_coding_gene_count": "67", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-07-06", "dateModified": "2021-07-06", "datePublished": "2021-07-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas botevensis" ], "sample_taxid": [ "2842352" ], "sample_host_organism": [ "Xanthosoma sagittifolium" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Cameroon: Boteva" ], 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"status": "below_threshold" }, { "organism_name": "Pseudomonas kribbensis", "strain": "strain=46-2", "accession": "GCA_003352185.1", "taxid": 1628086, "species_taxid": 1628086, "relation_to_type": "type", "validated": true, "ani": 89.2923, "matched_fragments": 1713, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas sputi", "strain": "strain=BML-PP014", "accession": "GCA_021603585.1", "taxid": 2892325, "species_taxid": 2892325, "relation_to_type": "type", "validated": true, "ani": 89.2661, "matched_fragments": 1641, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas pharyngis", "strain": "strain=BML-PP036", "accession": "GCA_021602345.1", "taxid": 2892333, "species_taxid": 2892333, "relation_to_type": "type", "validated": true, "ani": 89.2266, "matched_fragments": 1711, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas bananamidigenes", "strain": "strain=BW11P2", "accession": "GCA_001679645.1", "taxid": 2843610, "species_taxid": 2843610, "relation_to_type": "type", "validated": true, "ani": 88.5451, "matched_fragments": 1607, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas koreensis", "strain": "strain=CCUG 51519", "accession": "GCA_008801535.1", "taxid": 198620, "species_taxid": 198620, "relation_to_type": "suspected-type", "validated": true, "ani": 88.4666, "matched_fragments": 1662, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas koreensis", "strain": "strain=DSM 16610", "accession": "GCA_012986595.1", "taxid": 198620, "species_taxid": 198620, "relation_to_type": "suspected-type", "validated": true, "ani": 88.4596, "matched_fragments": 1652, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas ekonensis", "strain": "strain=COR58", "accession": "GCA_019145435.1", "taxid": 2842353, "species_taxid": 2842353, "relation_to_type": "type", "validated": true, "ani": 88.4278, "matched_fragments": 1657, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas koreensis", "strain": "strain=JCM 14769", "accession": "GCA_014646955.1", "taxid": 198620, "species_taxid": 198620, "relation_to_type": "suspected-type", "validated": true, "ani": 88.3692, "matched_fragments": 1672, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas monsensis", "strain": "strain=PGSB 8459", "accession": "GCA_014268495.2", "taxid": 2745509, "species_taxid": 2745509, "relation_to_type": "type", "validated": true, "ani": 87.8427, "matched_fragments": 1720, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas germanica", "strain": "strain=FIT28", "accession": "GCA_019614655.1", "taxid": 2815720, "species_taxid": 2815720, "relation_to_type": "type", "validated": true, "ani": 87.5523, "matched_fragments": 1706, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas triticicola", "strain": "strain=SWRI88", "accession": "GCA_019145375.1", "taxid": 2842345, "species_taxid": 2842345, "relation_to_type": "type", "validated": true, "ani": 87.2123, "matched_fragments": 1526, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas granadensis", "strain": "strain=LMG 27940", "accession": "GCA_900105485.1", "taxid": 1421430, "species_taxid": 1421430, "relation_to_type": "suspected-type", "validated": true, "ani": 87.0069, "matched_fragments": 1581, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas azerbaijanoriens", "strain": "strain=SWRI123", "accession": "GCA_019139795.1", "taxid": 2842350, "species_taxid": 2842350, "relation_to_type": "type", "validated": true, "ani": 86.1613, "matched_fragments": 1443, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas jessenii", "strain": "strain=DSM 17150", "accession": "GCA_002236115.1", "taxid": 77298, "species_taxid": 77298, "relation_to_type": "suspected-type", "validated": true, "ani": 86.0818, "matched_fragments": 1465, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas izuensis", "strain": "strain=IzPS43_3003", "accession": "GCA_009861505.1", "taxid": 2684212, "species_taxid": 2684212, "relation_to_type": "type", "validated": true, "ani": 85.9097, "matched_fragments": 1421, "total_fragments": 2122, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas moorei", "strain": "strain=CCUG 53114", "accession": "GCA_008801475.1", "taxid": 395599, "species_taxid": 395599, 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