{ "type": "genome", "identifier": "GCF_019188485.1", "organism": "Ursidibacter maritimus", "title": "Ursidibacter maritimus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Copenhagen", "publication": [ {} ], "properties": { "assembly_accession": "GCF_019188485.1", "bioproject": "PRJNA224116", "biosample": "SAMN15042919", "wgs_master": "JABULY000000000.1", "refseq_category": "na", "taxid": "1331689", "species_taxid": "1331689", "organism_name": "Ursidibacter maritimus", "infraspecific_name": "strain=Pb43106", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/07/09", "asm_name": "ASM1918848v1", "asm_submitter": "University of Copenhagen", "gbrs_paired_asm": "GCA_019188485.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/019/188/485/GCF_019188485.1_ASM1918848v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "1984749", "genome_size_ungapped": "1984642", "gc_percent": "38.000000", "replicon_count": "0", "scaffold_count": "54", "contig_count": "54", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_019188485.1-RS_2024_08_04", "annotation_date": "2024-08-04", "total_gene_count": "1941", "protein_coding_gene_count": "1823", "non_coding_gene_count": "67", "pubmed_id": "34250662" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-07-09", "dateModified": "2021-07-09", "datePublished": "2021-07-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Ursidibacter maritimus" ], "sample_taxid": [ "1331689" ], "sample_host_organism": [ "Ursus maritimus" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": 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"accession": "GCA_003843855.1", "taxid": 1443036, "species_taxid": 1443036, "relation_to_type": "type", "validated": true, "ani": 78.872, "matched_fragments": 273, "total_fragments": 649, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vespertiliibacter pulmonis", "strain": "strain=CCUG 64585", "accession": "GCA_013377275.1", "taxid": 1443036, "species_taxid": 1443036, "relation_to_type": "type", "validated": true, "ani": 78.8675, "matched_fragments": 275, "total_fragments": 649, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mannheimia varigena", "strain": "strain=177", "accession": "GCA_013377235.1", "taxid": 85404, "species_taxid": 85404, "relation_to_type": "type", "validated": true, "ani": 78.663, "matched_fragments": 193, "total_fragments": 649, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bibersteinia trehalosi", "strain": "strain=DSM 23101", "accession": "GCA_004346205.1", "taxid": 47735, 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78.1021, "matched_fragments": 148, "total_fragments": 649, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinobacillus pleuropneumoniae", "strain": "strain=4074", "accession": "GCA_000178495.2", "taxid": 715, "species_taxid": 715, "relation_to_type": "type", "validated": true, "ani": 77.9376, "matched_fragments": 188, "total_fragments": 649, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinobacillus pleuropneumoniae", "strain": "strain=S4074", "accession": "GCA_003290385.1", "taxid": 715, "species_taxid": 715, "relation_to_type": "type", "validated": true, "ani": 77.9331, "matched_fragments": 188, "total_fragments": 649, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_009761395.1", "gtdb_species": "s__Ursidibacter maritimus", "ani": 99.9955, "matched_fragments": 637, "total_fragments": 649, 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null, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": null, "sporulation": null, "motility": null, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": null, "coccus_cell_shape": null, "filament_cell_shape": null, "coccobacillus_cell_shape": null, "vibrio_cell_shape": null, "spiral_cell_shape": null }, "_genome_taxon": [ "Ursidibacter", "maritimus" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }