{ "type": "genome", "identifier": "GCF_019204045.1", "organism": "Erythrobacter crassostreae", "title": "Erythrobacter crassostreae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "HZI-Helmholtz Centre for Infection Research", "publication": [ {} ], "properties": { "assembly_accession": "GCF_019204045.1", "bioproject": "PRJNA224116", "biosample": "SAMN18747298", "wgs_master": "JAGSPC000000000.1", "refseq_category": "reference genome", "taxid": "2828328", "species_taxid": "2828328", "organism_name": "Erythrobacter crassostreae", "infraspecific_name": "strain=WH158", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/07/13", "asm_name": "ASM1920404v1", "asm_submitter": "HZI-Helmholtz Centre for Infection Research", "gbrs_paired_asm": "GCA_019204045.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/019/204/045/GCF_019204045.1_ASM1920404v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2586581", "genome_size_ungapped": "2586581", "gc_percent": "56.500000", "replicon_count": "0", "scaffold_count": "7", "contig_count": "7", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_019204045.1-RS_2024_08_08", "annotation_date": "2024-08-08", "total_gene_count": "2517", "protein_coding_gene_count": "2457", "non_coding_gene_count": "46", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-07-13", "dateModified": "2021-07-13", "datePublished": "2021-07-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Erythrobacter crassostreae" ], "sample_taxid": [ "2828328" ], "sample_host_organism": [], 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"status": "below_threshold" }, { "organism_name": "Qipengyuania xiapuensis", "strain": "strain=1NDW9", "accession": "GCA_019711395.1", "taxid": 2867236, "species_taxid": 2867236, "relation_to_type": "type", "validated": true, "ani": 76.9757, "matched_fragments": 159, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania proteolytica", "strain": "strain=6B39", "accession": "GCA_019711565.1", "taxid": 2867239, "species_taxid": 2867239, "relation_to_type": "type", "validated": true, "ani": 76.9316, "matched_fragments": 154, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania aurantiaca", "strain": "strain=1NDH13", "accession": "GCA_019711375.1", "taxid": 2867233, "species_taxid": 2867233, "relation_to_type": "type", "validated": true, "ani": 76.9279, "matched_fragments": 148, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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"strain=zrk23", "accession": "GCA_011057975.1", "taxid": 2711215, "species_taxid": 2711215, "relation_to_type": "type", "validated": true, "ani": 76.4332, "matched_fragments": 69, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas pruni", "strain": "strain=NBRC 15498", "accession": "GCA_001598455.1", "taxid": 40683, "species_taxid": 40683, "relation_to_type": "type", "validated": true, "ani": 76.386, "matched_fragments": 62, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingobium cupriresistens", "strain": "strain=CCTCC AB 2011146", "accession": "GCA_004152865.1", "taxid": 1132417, "species_taxid": 1132417, "relation_to_type": "type", "validated": true, "ani": 75.979, "matched_fragments": 71, "total_fragments": 860, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 50.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { 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