{ "type": "genome", "identifier": "GCF_019218685.1", "organism": "Streptococcus vulneris", "title": "Streptococcus vulneris", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Ming Chuan University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_019218685.1", "bioproject": "PRJNA224116", "biosample": "SAMN19878276", "wgs_master": "JAHUZC000000000.1", "refseq_category": "reference genome", "taxid": "2853160", "species_taxid": "2853160", "organism_name": "Streptococcus vulneris", "infraspecific_name": "strain=DM3B3", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/07/14", "asm_name": "ASM1921868v1", "asm_submitter": "Ming Chuan University", "gbrs_paired_asm": "GCA_019218685.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/019/218/685/GCF_019218685.1_ASM1921868v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "1963039", "genome_size_ungapped": "1963039", "gc_percent": "40.000000", "replicon_count": "0", "scaffold_count": "47", "contig_count": "47", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_019218685.1-RS_2024_06_07", "annotation_date": "2024-06-07", "total_gene_count": "1922", "protein_coding_gene_count": "1813", "non_coding_gene_count": "51", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-07-14", "dateModified": "2021-07-14", "datePublished": "2021-07-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptococcus vulneris" ], "sample_taxid": [ "2853160" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Taiwan: Taoyuan City" ], "sample_host_location_id": [], "data_size": "0.556 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "1963039", "Number of Sequences": "47", "Longest Sequences (bp)": "412320", "N50 (bp)": "115858", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "40.2", "Number of CDSs": "1812", "Average Protein Length": "315.1", "Coding Ratio (%)": "87.2", "Number of rRNAs": "1", "Number of tRNAs": "43", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptococcus vulneris", "strain": "strain=DM3B3", "accession": "GCA_019218685.1", "taxid": 2853160, "species_taxid": 2853160, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 637, "total_fragments": 637, 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