{ "type": "genome", "identifier": "GCF_019263585.2", "organism": "Pseudonocardia oceani", "title": "Pseudonocardia oceani", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Strathclyde", "publication": [ {} ], "properties": { "assembly_accession": "GCF_019263585.2", "bioproject": "PRJNA224116", "biosample": "SAMN16811657", "wgs_master": "JADQDF000000000.1", "refseq_category": "reference genome", "taxid": "2792013", "species_taxid": "2792013", "organism_name": "Pseudonocardia oceani", "infraspecific_name": "strain=KRD185", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/07/16", "asm_name": "ASM1926358v2", "asm_submitter": "University of Strathclyde", "gbrs_paired_asm": "GCA_019263585.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/019/263/585/GCF_019263585.2_ASM1926358v2", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6821805", "genome_size_ungapped": "6821805", "gc_percent": "74.000000", "replicon_count": "2", "scaffold_count": "3", "contig_count": "3", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_019263585.2-RS_2024_08_29", "annotation_date": "2024-08-29", "total_gene_count": "6871", "protein_coding_gene_count": "6687", "non_coding_gene_count": "55", "pubmed_id": "34582326" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-07-16", "dateModified": "2021-07-16", "datePublished": "2021-07-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudonocardia oceani" ], "sample_taxid": [ "2792013" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Southern 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95, "status": "conclusive" }, { "organism_name": "Pseudonocardia broussonetiae", "strain": "strain=Gen 01", "accession": "GCA_013155125.1", "taxid": 2736640, "species_taxid": 2736640, "relation_to_type": "type", "validated": true, "ani": 93.7376, "matched_fragments": 1810, "total_fragments": 2273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia petroleophila", "strain": "strain=CGMCC 4.1532", "accession": "GCA_014235185.1", "taxid": 37331, "species_taxid": 37331, "relation_to_type": "type", "validated": true, "ani": 87.9127, "matched_fragments": 1576, "total_fragments": 2273, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia abyssalis", "strain": "strain=KRD168", "accession": "GCA_019263705.2", "taxid": 2792008, "species_taxid": 2792008, "relation_to_type": "type", "validated": true, "ani": 87.4345, "matched_fragments": 1550, "total_fragments": 2273, "ani_threshold": 95, "status": "below_threshold" }, { 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