{ "type": "genome", "identifier": "GCF_019430945.1", "organism": "Rhizobium populisoli", "title": "Rhizobium populisoli", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Beijing Forestry University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_019430945.1", "bioproject": "PRJNA224116", "biosample": "SAMN20209572", "wgs_master": "JAHYCB000000000.1", "refseq_category": "reference genome", "taxid": "2859785", "species_taxid": "2859785", "organism_name": "Rhizobium populisoli", "infraspecific_name": "strain=XQZ8", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/07/31", "asm_name": "ASM1943094v1", "asm_submitter": "Beijing Forestry University", "gbrs_paired_asm": "GCA_019430945.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/019/430/945/GCF_019430945.1_ASM1943094v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6843924", "genome_size_ungapped": "6843730", "gc_percent": "60.000000", "replicon_count": "0", "scaffold_count": "52", "contig_count": "52", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_019430945.1-RS_2024_09_29", "annotation_date": "2024-09-29", "total_gene_count": "6745", "protein_coding_gene_count": "6479", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-07-31", "dateModified": "2021-07-31", "datePublished": "2021-07-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhizobium populisoli" ], "sample_taxid": [ "2859785" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Shuozhou" ], "sample_host_location_id": [], "data_size": "1.915 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "6843924", "Number of Sequences": "52", "Longest Sequences (bp)": "866001", "N50 (bp)": "643675", "Gap Ratio (%)": "0.002835", "GCcontent (%)": "60.1", "Number of CDSs": "6713", "Average Protein Length": "293.0", "Coding Ratio (%)": "86.2", "Number of rRNAs": "3", "Number of tRNAs": "53", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Rhizobium populisoli", "strain": "strain=XQZ8", "accession": "GCA_019430945.1", "taxid": 2859785, "species_taxid": 2859785, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2257, "total_fragments": 2258, "ani_threshold": 95, 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