{ "tc_result": [ { "organism_name": "Rubrobacter tropicus", "strain": "strain=SCSIO 52909", "accession": "GCA_011492945.1", "taxid": 2653851, "species_taxid": 2653851, "relation_to_type": "type", "validated": true, "ani": 78.0967, "matched_fragments": 394, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrobacter marinus", "strain": "strain=SCSIO 52915", "accession": "GCA_011492965.1", "taxid": 2653852, "species_taxid": 2653852, "relation_to_type": "type", "validated": true, "ani": 78.021, "matched_fragments": 386, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrobacter radiotolerans", "strain": "strain=DSM 5868", "accession": "GCA_900175965.1", "taxid": 42256, "species_taxid": 42256, "relation_to_type": "type", "validated": true, "ani": 77.54, "matched_fragments": 317, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrobacter aplysinae", "strain": "strain=RV113", "accession": "GCA_001029505.1", "taxid": 909625, "species_taxid": 909625, "relation_to_type": "type", "validated": true, "ani": 77.4212, "matched_fragments": 275, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrobacter indicoceani", "strain": "strain=SCSIO 08198", "accession": "GCA_003568865.1", "taxid": 2051957, "species_taxid": 2051957, "relation_to_type": "type", "validated": true, "ani": 76.6262, "matched_fragments": 205, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gaiella occulta", "strain": "strain=F2-233", "accession": "GCA_003351045.1", "taxid": 1002870, "species_taxid": 1002870, "relation_to_type": "type", "validated": true, "ani": 75.5081, "matched_fragments": 79, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Miltoncostaea oceani", "strain": "strain=SCSIO 61214", "accession": "GCA_018141545.1", "taxid": 2843216, "species_taxid": 2843216, "relation_to_type": "type", "validated": true, "ani": 75.4423, "matched_fragments": 98, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedococcus cremeus", "strain": "strain=CGMCC 1.6963", "accession": "GCA_900111375.1", "taxid": 587636, "species_taxid": 587636, "relation_to_type": "type", "validated": true, "ani": 75.203, "matched_fragments": 72, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia asaccharolytica", "strain": "strain=NBRC 16224", "accession": "GCA_007989065.1", "taxid": 54010, "species_taxid": 54010, "relation_to_type": "type", "validated": true, "ani": 75.1669, "matched_fragments": 86, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia antarctica", "strain": "strain=DSM 44749", "accession": "GCA_013408715.1", "taxid": 237656, "species_taxid": 237656, "relation_to_type": "type", "validated": true, "ani": 75.0209, "matched_fragments": 115, "total_fragments": 1042, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_007164525.1", "gtdb_species": "s__Rubrobacter_B xylanophilus_A", "ani": 95.2991, "matched_fragments": 919, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_000014185.1", "gtdb_species": "s__Rubrobacter_B xylanophilus", "ani": 89.5858, "matched_fragments": 876, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004337705.1", "gtdb_species": "s__Rubrobacter_C taiwanensis", "ani": 79.4277, "matched_fragments": 429, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004563715.1", "gtdb_species": "s__SIRX01 sp004563715", "ani": 78.6528, "matched_fragments": 380, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__SIRX01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016781725.1", "gtdb_species": "s__SCSIO-52909 sp016781725", "ani": 78.4824, "matched_fragments": 264, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__SCSIO-52909", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.84", "min_intra_species_ani": "98.84", "mean_intra_species_af": "0.72", "min_intra_species_af": "0.72", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_902810695.1", "gtdb_species": "s__CADDYV01 sp902810695", "ani": 77.8636, "matched_fragments": 331, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__CADDYV01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_902805985.1", "gtdb_species": "s__SCSIO-52909 sp902805985", "ani": 77.8346, "matched_fragments": 285, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__SCSIO-52909", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013695915.1", "gtdb_species": "s__Rubrobacter_A sp013695915", "ani": 77.5478, "matched_fragments": 260, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900175965.1", "gtdb_species": "s__Rubrobacter radiotolerans", "ani": 77.5473, "matched_fragments": 317, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_016781705.1", "gtdb_species": "s__SCSIO-52915 sp016781705", "ani": 77.4372, "matched_fragments": 251, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__SCSIO-52915", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_902806075.1", "gtdb_species": "s__SCSIO-52915 sp902806075", "ani": 77.3531, "matched_fragments": 193, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__SCSIO-52915", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013815485.1", "gtdb_species": "s__JACDGB01 sp013815485", "ani": 77.1111, "matched_fragments": 162, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__JACDGB01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016781885.1", "gtdb_species": "s__SCSIO-52915 sp016781885", "ani": 76.8519, "matched_fragments": 179, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__SCSIO-52915", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003568865.1", "gtdb_species": "s__Rubrobacter indicoceani", "ani": 76.6459, "matched_fragments": 203, "total_fragments": 1042, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }