{ "tc_result": [ { "organism_name": "Corynebacterium glucuronolyticum", "strain": "strain=DSM 44120", "accession": "GCA_900176155.1", "taxid": 39791, "species_taxid": 39791, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 921, "total_fragments": 922, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium glucuronolyticum", "strain": "strain=DSM 44120", "accession": "GCA_019633635.1", "taxid": 39791, "species_taxid": 39791, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 921, "total_fragments": 922, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium glucuronolyticum", "strain": "strain=FDAARGOS_1053", "accession": "GCA_016127395.1", "taxid": 39791, "species_taxid": 39791, "relation_to_type": "type", "validated": true, "ani": 99.9929, "matched_fragments": 922, "total_fragments": 922, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Corynebacterium pyruviciproducens", "strain": "strain=ATCC BAA-1742", "accession": "GCA_000411375.1", "taxid": 598660, "species_taxid": 598660, "relation_to_type": "type", "validated": true, "ani": 82.6535, "matched_fragments": 526, "total_fragments": 922, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium vitaeruminis", "strain": "strain=DSM 20294", "accession": "GCA_000550805.1", "taxid": 38305, "species_taxid": 38305, "relation_to_type": "type", "validated": true, "ani": 78.2453, "matched_fragments": 164, "total_fragments": 922, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium jeddahense", "strain": "strain=JCB", "accession": "GCA_000577555.1", "taxid": 1414719, "species_taxid": 1414719, "relation_to_type": "type", "validated": true, "ani": 77.9635, "matched_fragments": 128, "total_fragments": 922, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium gottingense", "strain": "strain=DSM 103494", "accession": "GCA_003693265.1", "taxid": 2041036, "species_taxid": 2041036, "relation_to_type": "type", "validated": true, "ani": 77.9192, "matched_fragments": 115, "total_fragments": 922, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium bouchesdurhonense", "strain": "strain=SN14", "accession": "GCA_900078305.2", "taxid": 1720192, "species_taxid": 1720192, "relation_to_type": "type", "validated": true, "ani": 77.6364, "matched_fragments": 124, "total_fragments": 922, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Corynebacterium frankenforstense", "strain": "strain=ST18", "accession": "GCA_001941485.1", "taxid": 1230998, "species_taxid": 1230998, "relation_to_type": "type", "validated": true, "ani": 77.6147, "matched_fragments": 177, "total_fragments": 922, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gordonia humi", "strain": "strain=DSM 45298", "accession": "GCA_014197435.1", "taxid": 686429, "species_taxid": 686429, "relation_to_type": "type", "validated": true, "ani": 76.1037, "matched_fragments": 55, "total_fragments": 922, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.54, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900176155.1", "gtdb_species": "s__Corynebacterium glucuronolyticum", "ani": 100.0, "matched_fragments": 921, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.97", "min_intra_species_ani": "98.66", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 8, "status": "conclusive" }, { "accession": "GCF_000411375.1", "gtdb_species": "s__Corynebacterium pyruviciproducens", "ani": 82.6379, "matched_fragments": 527, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.67", "min_intra_species_ani": "97.67", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000550805.1", "gtdb_species": "s__Corynebacterium vitaeruminis", "ani": 78.2453, "matched_fragments": 164, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.86", "min_intra_species_ani": "98.60", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000819445.1", "gtdb_species": "s__Corynebacterium humireducens", "ani": 77.9612, "matched_fragments": 145, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.80", "min_intra_species_ani": "97.60", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000577555.1", "gtdb_species": "s__Corynebacterium jeddahense", "ani": 77.9378, "matched_fragments": 129, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003693265.1", "gtdb_species": "s__Corynebacterium gottingense", "ani": 77.9192, "matched_fragments": 115, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.52", "min_intra_species_ani": "97.05", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.90", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCF_015351335.1", "gtdb_species": "s__Corynebacterium lipophilum", "ani": 77.8602, "matched_fragments": 121, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001807265.1", "gtdb_species": "s__Corynebacterium sp001807265", "ani": 77.8205, "matched_fragments": 124, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.96", "min_intra_species_ani": "97.96", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000980815.1", "gtdb_species": "s__Corynebacterium camporealensis", "ani": 77.7984, "matched_fragments": 96, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.96", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_900156035.1", "gtdb_species": "s__Corynebacterium afermentans", "ani": 77.7306, "matched_fragments": 127, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.27", "min_intra_species_ani": "97.60", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.89", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_900177745.1", "gtdb_species": "s__Corynebacterium pollutisoli", "ani": 77.6479, "matched_fragments": 161, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.83", "min_intra_species_ani": "98.83", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900156665.1", "gtdb_species": "s__Corynebacterium appendicis", "ani": 77.6421, "matched_fragments": 121, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001941485.1", "gtdb_species": "s__Corynebacterium frankenforstense", "ani": 77.6308, "matched_fragments": 176, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900078305.2", "gtdb_species": "s__Corynebacterium bouchesdurhonense", "ani": 77.6111, "matched_fragments": 125, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002339505.1", "gtdb_species": "s__Corynebacterium sp002339505", "ani": 77.5938, "matched_fragments": 107, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000372385.1", "gtdb_species": "s__Corynebacterium ciconiae", "ani": 77.5653, "matched_fragments": 93, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002994655.1", "gtdb_species": "s__Corynebacterium sp002994655", "ani": 77.4147, "matched_fragments": 129, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006539825.1", "gtdb_species": "s__Corynebacterium variabile", "ani": 77.2683, "matched_fragments": 101, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.53", "min_intra_species_ani": "98.15", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.86", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_000375365.1", "gtdb_species": "s__Corynebacterium mastitidis", "ani": 77.0378, "matched_fragments": 136, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.64", "min_intra_species_ani": "96.64", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014197435.1", "gtdb_species": "s__Gordonia humi", "ani": 76.1037, "matched_fragments": 55, "total_fragments": 922, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Gordonia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }