{ "type": "genome", "identifier": "GCF_019795105.1", "organism": "Collinsella ureilytica", "title": "Collinsella ureilytica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Korean Research Institute of Bioscience and Biotechnology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_019795105.1", "bioproject": "PRJNA224116", "biosample": "SAMN20924691", "wgs_master": "JAIMFO000000000.1", "refseq_category": "reference genome", "taxid": "2869515", "species_taxid": "2869515", "organism_name": "Collinsella ureilytica", "infraspecific_name": "strain=AGMB00827", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/08/29", "asm_name": "ASM1979510v1", "asm_submitter": "Korean Research Institute of Bioscience and Biotechnology", "gbrs_paired_asm": "GCA_019795105.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/019/795/105/GCF_019795105.1_ASM1979510v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "1945251", "genome_size_ungapped": "1945251", "gc_percent": "52.500000", "replicon_count": "0", "scaffold_count": "11", "contig_count": "11", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_019795105.1-RS_2024_08_24", "annotation_date": "2024-08-24", "total_gene_count": "1723", "protein_coding_gene_count": "1665", "non_coding_gene_count": "52", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-08-29", "dateModified": "2021-08-29", "datePublished": "2021-08-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Collinsella ureilytica" ], "sample_taxid": [ "2869515" ], "sample_host_organism": [ "Sus scrofa 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"phenotypes": null, "cell_diameter": -0.468, "cell_length": 0.068, "doubling_h": null, "growth_tmp": 37.0, "optimum_tmp": 36.437, "optimum_ph": 7.233, "genome_size": 2378629.5, "gc_content": 62.0, "coding_genes": 1896.0, "rRNA16S_genes": null, "tRNA_genes": 57.0, "gram_stain": 1.0, "sporulation": 0.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 1.0, "aerobic_respiration": 0.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Collinsella", "ureilytica" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }