{
    "type": "genome",
    "identifier": "GCF_019933175.1",
    "organism": "Edwardsiella tarda",
    "title": "Edwardsiella tarda",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "US Food and Drug Administration",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_019933175.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN20888890",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "636",
        "species_taxid": "636",
        "organism_name": "Edwardsiella tarda",
        "infraspecific_name": "strain=FDAARGOS_1473",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Chromosome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/13",
        "asm_name": "ASM1993317v1",
        "asm_submitter": "US Food and Drug Administration",
        "gbrs_paired_asm": "GCA_019933175.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/019/933/175/GCF_019933175.1_ASM1993317v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3802888",
        "genome_size_ungapped": "3802788",
        "gc_percent": "57.000000",
        "replicon_count": "3",
        "scaffold_count": "3",
        "contig_count": "3",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_019933175.1-RS_2024_11_06",
        "annotation_date": "2024-11-06",
        "total_gene_count": "3536",
        "protein_coding_gene_count": "3324",
        "non_coding_gene_count": "142",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-13",
    "dateModified": "2021-09-13",
    "datePublished": "2021-09-13",
    "_annotation": {
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        "sample_organism": [
            "Edwardsiella tarda"
        ],
        "sample_taxid": [
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        ],
        "sample_host_organism": [
            "missing"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [
            "Unknown",
            "Unknown"
        ],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Braunschweig"
        ],
        "sample_host_location_id": [],
        "data_size": "1.075 MB",
        "sample_ph_range": {
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            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
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        "completeness": 98.96,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
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    "_dfast": {
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        "Number of Sequences": "3",
        "Longest Sequences (bp)": "3651348",
        "N50 (bp)": "3651348",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "56.9",
        "Number of CDSs": "3412",
        "Average Protein Length": "313.4",
        "Coding Ratio (%)": "84.4",
        "Number of rRNAs": "32",
        "Number of tRNAs": "105",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
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                "organism_name": "Edwardsiella tarda",
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            {
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                "ani_threshold": 95,
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            },
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            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Edwardsiella hoshinae",
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                "accession": "GCA_900447315.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leclercia pneumoniae",
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                "accession": "GCA_018987305.1",
                "taxid": 2815358,
                "species_taxid": 2815358,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Serratia nevei",
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                "accession": "GCA_008364245.1",
                "taxid": 2703794,
                "species_taxid": 2703794,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 421,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leclercia pneumoniae",
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                "accession": "GCA_017348915.1",
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                "matched_fragments": 260,
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            },
            {
                "organism_name": "Enterobacter sichuanensis",
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                "accession": "GCA_025002605.1",
                "taxid": 2071710,
                "species_taxid": 2071710,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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                "accession": "GCF_000341505.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Edwardsiella",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Edwardsiella",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Edwardsiella",
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                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 11,
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        ]
    },
    "_bac2feature": {
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        "range_salinity": null,
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        "bacillus_cell_shape": 1.0,
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    "_genome_taxon": [
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        "tarda"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}