{ "type": "genome", "identifier": "GCF_020073815.1", "organism": "Nocardioides mangrovi", "title": "Nocardioides mangrovi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Life sciences Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_020073815.1", "bioproject": "PRJNA224116", "biosample": "SAMN21220246", "wgs_master": "JAIQZJ000000000.1", "refseq_category": "reference genome", "taxid": "2874580", "species_taxid": "2874580", "organism_name": "Nocardioides mangrovi", "infraspecific_name": "strain=GBK3QG-3", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/09/20", "asm_name": "ASM2007381v1", "asm_submitter": "Life sciences Institute", "gbrs_paired_asm": "GCA_020073815.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/020/073/815/GCF_020073815.1_ASM2007381v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5040256", "genome_size_ungapped": "5040256", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "39", "contig_count": "39", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_020073815.1-RS_2024_08_29", "annotation_date": "2024-08-29", "total_gene_count": "4936", "protein_coding_gene_count": "4872", "non_coding_gene_count": "53", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-09-20", "dateModified": "2021-09-20", "datePublished": "2021-09-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Nocardioides mangrovi" ], "sample_taxid": [ "2874580" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Guangxi" ], 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"strain": "strain=DSM 21350", "accession": "GCA_013409645.1", "taxid": 661492, "species_taxid": 661492, "relation_to_type": "type", "validated": true, "ani": 82.0573, "matched_fragments": 840, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides ungokensis", "strain": "strain=LMG 28591", "accession": "GCA_013466985.1", "taxid": 1643322, "species_taxid": 1643322, "relation_to_type": "type", "validated": true, "ani": 82.0438, "matched_fragments": 919, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides szechwanensis", "strain": "strain=CGMCC 1.11147", "accession": "GCA_900103935.1", "taxid": 1005944, "species_taxid": 1005944, "relation_to_type": "type", "validated": true, "ani": 82.0259, "matched_fragments": 854, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides szechwanensis", "strain": "strain=NBRC 108562", "accession": "GCA_007992395.1", "taxid": 1005944, "species_taxid": 1005944, "relation_to_type": "type", "validated": true, "ani": 81.9453, "matched_fragments": 854, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides lijunqiniae", "strain": "strain=S-531", "accession": "GCA_015024225.1", "taxid": 2760832, "species_taxid": 2760832, "relation_to_type": "type", "validated": true, "ani": 81.8159, "matched_fragments": 890, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides rubriscoriae", "strain": "strain=DSM 23986", "accession": "GCA_008087085.1", "taxid": 642762, "species_taxid": 642762, "relation_to_type": "type", "validated": true, "ani": 81.3176, "matched_fragments": 863, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides sediminis", "strain": "strain=KCTC 19271", "accession": "GCA_003047295.1", "taxid": 433648, "species_taxid": 433648, "relation_to_type": "type", "validated": true, "ani": 81.1837, "matched_fragments": 753, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides exalbidus", "strain": "strain=DSM 22017", "accession": "GCA_900105585.1", "taxid": 402596, "species_taxid": 402596, "relation_to_type": "type", "validated": true, "ani": 81.0083, "matched_fragments": 825, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides litoris", "strain": "strain=DSM 103718", "accession": "GCA_006346315.1", "taxid": 1926648, "species_taxid": 1926648, "relation_to_type": "type", "validated": true, "ani": 81.0042, "matched_fragments": 857, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides okcheonensis", "strain": "strain=MMS20-HV4-12", "accession": "GCA_020991065.1", "taxid": 2894081, "species_taxid": 2894081, "relation_to_type": "type", "validated": true, "ani": 80.9911, "matched_fragments": 826, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides lacusdianchii", "strain": "strain=JXJ CY 38", "accession": "GCA_020102855.1", "taxid": 2783664, "species_taxid": 2783664, "relation_to_type": "type", "validated": true, "ani": 80.9845, "matched_fragments": 749, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides baculatus", "strain": "strain=G10", "accession": "GCA_016735675.1", "taxid": 2801337, "species_taxid": 2801337, "relation_to_type": "type", "validated": true, "ani": 80.8626, "matched_fragments": 802, "total_fragments": 1661, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides aromaticivorans", "strain": "strain=DSM 15131", "accession": "GCA_013408525.1", "taxid": 200618, "species_taxid": 200618, "relation_to_type": "type", "validated": true, "ani": 80.8613, 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