{ "type": "genome", "identifier": "GCF_020089865.1", "organism": "Microvirga puerhi", "title": "Microvirga puerhi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Beijing University of Chemical Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_020089865.1", "bioproject": "PRJNA224116", "biosample": "SAMN21352852", "wgs_master": "JAIRBM000000000.1", "refseq_category": "reference genome", "taxid": "2876078", "species_taxid": "2876078", "organism_name": "Microvirga puerhi", "infraspecific_name": "strain=WGZ8", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/09/21", "asm_name": "ASM2008986v1", "asm_submitter": "Beijing University of Chemical Technology", "gbrs_paired_asm": "GCA_020089865.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/020/089/865/GCF_020089865.1_ASM2008986v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5165995", "genome_size_ungapped": "5165975", "gc_percent": "61.000000", "replicon_count": "0", "scaffold_count": "47", "contig_count": "47", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_020089865.1-RS_2024_08_08", "annotation_date": "2024-08-08", "total_gene_count": "4905", "protein_coding_gene_count": "4755", "non_coding_gene_count": "59", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-09-21", "dateModified": "2021-09-21", "datePublished": "2021-09-21", "_annotation": { "sample_count": 1, "sample_organism": [ "Microvirga puerhi" ], "sample_taxid": [ "2876078" ], "sample_host_organism": [ "Camellia sinensis var. assamica" ], "sample_host_organism_id": [], "sample_host_disease": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga ossetica", "strain": "strain=V5/3M", "accession": "GCA_002741015.1", "taxid": 1882682, "species_taxid": 1882682, "relation_to_type": "type", "validated": true, "ani": 80.4648, "matched_fragments": 760, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga flocculans", "strain": "strain=ATCC BAA-817", "accession": "GCA_000518665.1", "taxid": 217168, "species_taxid": 217168, "relation_to_type": "type", "validated": true, "ani": 80.4534, "matched_fragments": 648, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga zambiensis", "strain": "strain=WSM3693", "accession": "GCA_016735695.1", "taxid": 1402137, "species_taxid": 1402137, "relation_to_type": "type", "validated": true, "ani": 80.4236, "matched_fragments": 731, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga lotononidis", "strain": "strain=WSM3557", "accession": "GCA_000262405.1", "taxid": 864069, "species_taxid": 864069, "relation_to_type": "type", "validated": true, "ani": 80.3303, "matched_fragments": 756, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga mediterraneensis", "strain": "strain=Marseille-Q2068", "accession": "GCA_013520865.1", "taxid": 2754695, "species_taxid": 2754695, "relation_to_type": "type", "validated": true, "ani": 80.2646, "matched_fragments": 703, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga calopogonii", "strain": "strain=CCBAU 65841", "accession": "GCA_003347665.1", "taxid": 2078013, "species_taxid": 2078013, "relation_to_type": "type", "validated": true, "ani": 80.2502, "matched_fragments": 725, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga roseola", "strain": "strain=SM2", "accession": "GCA_020866965.1", "taxid": 2883126, "species_taxid": 2883126, "relation_to_type": "type", "validated": true, "ani": 80.2374, "matched_fragments": 631, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga splendida", "strain": "strain=BT325", "accession": "GCA_016427565.1", "taxid": 2795727, "species_taxid": 2795727, "relation_to_type": "type", "validated": true, "ani": 80.2086, "matched_fragments": 694, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga alba", "strain": "strain=BT350", "accession": "GCA_015694465.1", "taxid": 2791025, "species_taxid": 2791025, "relation_to_type": "type", "validated": true, "ani": 80.1053, "matched_fragments": 646, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga aerophila", "strain": "strain=DSM 21344", "accession": "GCA_003332305.1", "taxid": 670291, "species_taxid": 670291, "relation_to_type": "type", "validated": true, "ani": 80.0912, "matched_fragments": 612, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga pakistanensis", "strain": "strain=NCCP-1258", "accession": "GCA_004458765.1", "taxid": 1682650, "species_taxid": 1682650, "relation_to_type": "type", "validated": true, "ani": 80.0513, "matched_fragments": 630, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga aerophila", "strain": "strain=NBRC 106136", "accession": "GCA_007991675.1", "taxid": 670291, "species_taxid": 670291, "relation_to_type": "type", "validated": true, "ani": 79.9712, "matched_fragments": 627, "total_fragments": 1697, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga flavescens", "strain": "strain=c27j1", "accession": "GCA_003290125.1", "taxid": 2249811, "species_taxid": 2249811, "relation_to_type": 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