{
    "type": "genome",
    "identifier": "GCF_020523605.1",
    "organism": "Roseicella aerolata",
    "title": "Roseicella aerolata",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Southern Medical University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_020523605.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN22220438",
        "wgs_master": "JAJAQI000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2883479",
        "species_taxid": "2883479",
        "organism_name": "Roseicella aerolata",
        "infraspecific_name": "strain=GB24",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/10/18",
        "asm_name": "ASM2052360v1",
        "asm_submitter": "Southern Medical University",
        "gbrs_paired_asm": "GCA_020523605.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/020/523/605/GCF_020523605.1_ASM2052360v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6153170",
        "genome_size_ungapped": "6153170",
        "gc_percent": "71.500000",
        "replicon_count": "0",
        "scaffold_count": "194",
        "contig_count": "194",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_020523605.1-RS_2024_12_16",
        "annotation_date": "2024-12-16",
        "total_gene_count": "5694",
        "protein_coding_gene_count": "5559",
        "non_coding_gene_count": "62",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-10-18",
    "dateModified": "2021-10-18",
    "datePublished": "2021-10-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Roseicella aerolata"
        ],
        "sample_taxid": [
            "2883479"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China"
        ],
        "sample_host_location_id": [],
        "data_size": "1.651 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6153170",
        "Number of Sequences": "194",
        "Longest Sequences (bp)": "307669",
        "N50 (bp)": "108475",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "71.5",
        "Number of CDSs": "5684",
        "Average Protein Length": "310.8",
        "Coding Ratio (%)": "86.1",
        "Number of rRNAs": "2",
        "Number of tRNAs": "66",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Belnapia mucosa",
                "strain": "strain=T6",
                "accession": "GCA_016775475.1",
                "taxid": 2804532,
                "species_taxid": 2804532,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.3817,
                "matched_fragments": 1146,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Siccirubricoccus deserti",
                "strain": "strain=CGMCC 1.15936",
                "accession": "GCA_014644195.1",
                "taxid": 2013562,
                "species_taxid": 2013562,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.3757,
                "matched_fragments": 1164,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Siccirubricoccus deserti",
                "strain": "strain=SYSU D8009",
                "accession": "GCA_014283215.1",
                "taxid": 2013562,
                "species_taxid": 2013562,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.3697,
                "matched_fragments": 1168,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Belnapia rosea",
                "strain": "strain=CGMCC 1.10758",
                "accession": "GCA_900104205.1",
                "taxid": 938405,
                "species_taxid": 938405,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.9123,
                "matched_fragments": 1143,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Belnapia rosea",
                "strain": "strain=CPCC 100156",
                "accession": "GCA_900101615.1",
                "taxid": 938405,
                "species_taxid": 938405,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.8883,
                "matched_fragments": 1162,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Belnapia arida",
                "strain": "strain=T18",
                "accession": "GCA_016773205.1",
                "taxid": 2804533,
                "species_taxid": 2804533,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.5928,
                "matched_fragments": 1106,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Belnapia moabensis",
                "strain": "strain=DSM 16746",
                "accession": "GCA_000745835.1",
                "taxid": 365533,
                "species_taxid": 365533,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.4189,
                "matched_fragments": 1087,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas alkaliterrae",
                "strain": "strain=DSM 25895",
                "accession": "GCA_014199195.1",
                "taxid": 1452450,
                "species_taxid": 1452450,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.6542,
                "matched_fragments": 842,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas rhizosphaerae",
                "strain": "strain=YW11",
                "accession": "GCA_002631185.1",
                "taxid": 1335062,
                "species_taxid": 1335062,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.6194,
                "matched_fragments": 812,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas rubea",
                "strain": "strain=MO17",
                "accession": "GCA_016106015.1",
                "taxid": 2748666,
                "species_taxid": 2748666,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.399,
                "matched_fragments": 709,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas oryzicola",
                "strain": "strain=KCTC 22478",
                "accession": "GCA_012163135.1",
                "taxid": 535904,
                "species_taxid": 535904,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3328,
                "matched_fragments": 891,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas deserti",
                "strain": "strain=M3",
                "accession": "GCA_001982615.1",
                "taxid": 1817963,
                "species_taxid": 1817963,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9176,
                "matched_fragments": 793,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseococcus pinisoli",
                "strain": "strain=XZZS9",
                "accession": "GCA_018413645.1",
                "taxid": 2835040,
                "species_taxid": 2835040,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.8418,
                "matched_fragments": 721,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseococcus microcysteis",
                "strain": "strain=NIBR12",
                "accession": "GCA_014764365.1",
                "taxid": 2771361,
                "species_taxid": 2771361,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7146,
                "matched_fragments": 737,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rhodovarius crocodyli",
                "strain": "strain=CCP-6",
                "accession": "GCA_004005855.1",
                "taxid": 1979269,
                "species_taxid": 1979269,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.4408,
                "matched_fragments": 698,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseomonas haemaphysalidis",
                "strain": "strain=546",
                "accession": "GCA_017355405.1",
                "taxid": 2768162,
                "species_taxid": 2768162,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1499,
                "matched_fragments": 677,
                "total_fragments": 1965,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_004343615.1",
                "gtdb_species": "s__Paracraurococcus sp004343615",
                "ani": 85.9049,
                "matched_fragments": 1330,
                "total_fragments": 1965,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Paracraurococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003258945.1",
                "gtdb_species": "s__Paracraurococcus frigidaeris",
                "ani": 85.0503,
                "matched_fragments": 1328,
                "total_fragments": 1965,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Paracraurococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004353985.1",
                "gtdb_species": "s__Paracraurococcus ruber",
                "ani": 84.8889,
                "matched_fragments": 1242,
                "total_fragments": 1965,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Paracraurococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.87",
                "min_intra_species_ani": "99.87",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_013112485.1",
                "gtdb_species": "s__Paracraurococcus sp013112485",
                "ani": 84.7481,
                "matched_fragments": 1286,
                "total_fragments": 1965,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Paracraurococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004355005.1",
                "gtdb_species": "s__Paracraurococcus ruber_A",
                "ani": 84.3976,
                "matched_fragments": 1366,
                "total_fragments": 1965,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Paracraurococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_008360935.1",
                "gtdb_species": "s__Siccirubricoccus phaeus",
                "ani": 82.3526,
                "matched_fragments": 1211,
                "total_fragments": 1965,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Siccirubricoccus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014283215.1",
                "gtdb_species": "s__Siccirubricoccus deserti",
                "ani": 82.3363,
                "matched_fragments": 1173,
                "total_fragments": 1965,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Siccirubricoccus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_019084075.1",
                "gtdb_species": "s__G192 sp019084075",
                "ani": 82.1559,
                "matched_fragments": 1106,
                "total_fragments": 1965,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__G192",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004761865.1",
                "gtdb_species": "s__Crenalkalicoccus roseus",
                "ani": 81.5674,
                "matched_fragments": 978,
                "total_fragments": 1965,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Crenalkalicoccus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_genome_taxon": [
        "Roseicella",
        "aerolata"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}