{
    "type": "genome",
    "identifier": "GCF_020526085.1",
    "organism": "Klebsiella africana",
    "title": "Klebsiella africana",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Monash University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_020526085.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN22024779",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "2489010",
        "species_taxid": "2489010",
        "organism_name": "Klebsiella africana",
        "infraspecific_name": "strain=200023",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/10/19",
        "asm_name": "ASM2052608v1",
        "asm_submitter": "Monash University",
        "gbrs_paired_asm": "GCA_020526085.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/020/526/085/GCF_020526085.1_ASM2052608v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "5443802",
        "genome_size_ungapped": "5443802",
        "gc_percent": "56.500000",
        "replicon_count": "2",
        "scaffold_count": "2",
        "contig_count": "2",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_020526085.1-RS_2024_12_16",
        "annotation_date": "2024-12-16",
        "total_gene_count": "5251",
        "protein_coding_gene_count": "5027",
        "non_coding_gene_count": "122",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-10-19",
    "dateModified": "2021-10-19",
    "datePublished": "2021-10-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Klebsiella africana"
        ],
        "sample_taxid": [
            "2489010"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Senegal"
        ],
        "sample_host_location_id": [],
        "data_size": "1.533 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 98.96,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "5443802",
        "Number of Sequences": "2",
        "Longest Sequences (bp)": "5243981",
        "N50 (bp)": "5243981",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "56.7",
        "Number of CDSs": "5073",
        "Average Protein Length": "313.7",
        "Coding Ratio (%)": "87.7",
        "Number of rRNAs": "25",
        "Number of tRNAs": "87",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Klebsiella africana",
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                "accession": "GCA_020526085.1",
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                "species_taxid": 2489010,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1811,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Klebsiella africana",
                "strain": "strain=SB5857",
                "accession": "GCA_900978845.1",
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                "species_taxid": 2489010,
                "relation_to_type": "type",
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                "ani": 99.9766,
                "matched_fragments": 1692,
                "total_fragments": 1813,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Klebsiella quasivariicola",
                "strain": "strain=KPN1705",
                "accession": "GCA_002269255.1",
                "taxid": 2026240,
                "species_taxid": 2026240,
                "relation_to_type": "type",
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                "ani": 95.3408,
                "matched_fragments": 1582,
                "total_fragments": 1813,
                "ani_threshold": 95,
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            },
            {
                "organism_name": "Klebsiella pneumoniae",
                "strain": "strain=FDAARGOS_775",
                "accession": "GCA_006364295.1",
                "taxid": 573,
                "species_taxid": 573,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.2616,
                "matched_fragments": 1554,
                "total_fragments": 1813,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Klebsiella pneumoniae",
                "strain": "strain=ATCC 13883",
                "accession": "GCA_000742135.1",
                "taxid": 573,
                "species_taxid": 573,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.239,
                "matched_fragments": 1541,
                "total_fragments": 1813,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Klebsiella pneumoniae",
                "strain": "strain=PartO-Kpneumoniae-RM8376",
                "accession": "GCA_022869665.1",
                "taxid": 573,
                "species_taxid": 573,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.2292,
                "matched_fragments": 1556,
                "total_fragments": 1813,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Klebsiella pneumoniae subsp. pneumoniae",
                "strain": "strain=ATCC 13883",
                "accession": "GCA_000788015.1",
                "taxid": 72407,
                "species_taxid": 573,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.2131,
                "matched_fragments": 1545,
                "total_fragments": 1813,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Klebsiella pneumoniae subsp. pneumoniae",
                "strain": "strain=NBRC 14940",
                "accession": "GCA_001590945.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 95.1963,
                "matched_fragments": 1493,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Klebsiella pneumoniae subsp. rhinoscleromatis",
                "strain": "strain=ATCC 13884",
                "accession": "GCA_000163455.1",
                "taxid": 39831,
                "species_taxid": 573,
                "relation_to_type": "type",
                "validated": true,
                "ani": 95.022,
                "matched_fragments": 1502,
                "total_fragments": 1813,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Klebsiella variicola",
                "strain": "strain=DSM 15968",
                "accession": "GCA_000828055.2",
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                "species_taxid": 244366,
                "relation_to_type": "type",
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                "ani": 94.362,
                "matched_fragments": 1564,
                "total_fragments": 1813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Klebsiella quasipneumoniae subsp. quasipneumoniae",
                "strain": "strain=01A030T",
                "accession": "GCA_020525925.1",
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                "species_taxid": 1463165,
                "relation_to_type": "type",
                "validated": true,
                "ani": 93.2261,
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                "total_fragments": 1813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter roggenkampii",
                "strain": "strain=DSM 16690",
                "accession": "GCA_024390995.1",
                "taxid": 1812935,
                "species_taxid": 1812935,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.9207,
                "matched_fragments": 903,
                "total_fragments": 1813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter wuhouensis",
                "strain": "strain=WCHEW120002",
                "accession": "GCA_004331265.1",
                "taxid": 2529381,
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                "relation_to_type": "type",
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                "ani": 81.896,
                "matched_fragments": 903,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter sichuanensis",
                "strain": "strain=WCHECL1597",
                "accession": "GCA_025002605.1",
                "taxid": 2071710,
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                "relation_to_type": "type",
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                "ani": 81.5321,
                "matched_fragments": 922,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter cloacae",
                "strain": "strain=DSM 30054",
                "accession": "GCA_021469225.1",
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                "relation_to_type": "type",
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                "matched_fragments": 909,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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        "gtdb_result": [
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                "accession": "GCF_900978845.1",
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                "total_fragments": 1813,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Klebsiella",
                "ani_circumscription_radius": 95.216,
                "mean_intra_species_ani": "95.65",
                "min_intra_species_ani": "95.27",
                "mean_intra_species_af": "0.93",
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            },
            {
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                "accession": "GCF_000828055.2",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}