{ "type": "genome", "identifier": "GCF_020595095.1", "organism": "Microvirga rosea", "title": "Microvirga rosea", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Beijing University of Chemical Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_020595095.1", "bioproject": "PRJNA224116", "biosample": "SAMN22419692", "wgs_master": "JAJDOP000000000.1", "refseq_category": "reference genome", "taxid": "2715425", "species_taxid": "2715425", "organism_name": "Microvirga rosea", "infraspecific_name": "strain=CGMCC1.16488", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/10/25", "asm_name": "ASM2059509v1", "asm_submitter": "Beijing University of Chemical Technology", "gbrs_paired_asm": "GCA_020595095.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/020/595/095/GCF_020595095.1_ASM2059509v1", 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"not applicable" ], "sample_host_location_id": [], "data_size": "1.412 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "5018468", "Number of Sequences": "38", "Longest Sequences (bp)": "895713", "N50 (bp)": "489704", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "61.4", "Number of CDSs": "4759", "Average Protein Length": "306.2", "Coding Ratio (%)": "87.1", "Number of rRNAs": "3", "Number of tRNAs": "50", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Microvirga rosea", "strain": "strain=CGMCC1.16488", "accession": "GCA_020595095.1", "taxid": 2715425, "species_taxid": 2715425, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1651, "total_fragments": 1653, 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"Microvirga lotononidis", "strain": "strain=WSM3557", "accession": "GCA_000262405.1", "taxid": 864069, "species_taxid": 864069, "relation_to_type": "type", "validated": true, "ani": 80.3339, "matched_fragments": 772, "total_fragments": 1653, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga flocculans", "strain": "strain=ATCC BAA-817", "accession": "GCA_000518665.1", "taxid": 217168, "species_taxid": 217168, "relation_to_type": "type", "validated": true, "ani": 80.2548, "matched_fragments": 612, "total_fragments": 1653, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga mediterraneensis", "strain": "strain=Marseille-Q2068", "accession": "GCA_013520865.1", "taxid": 2754695, "species_taxid": 2754695, "relation_to_type": "type", "validated": true, "ani": 80.15, "matched_fragments": 685, "total_fragments": 1653, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga ossetica", "strain": "strain=V5/3M", "accession": "GCA_002741015.1", "taxid": 1882682, "species_taxid": 1882682, "relation_to_type": "type", "validated": true, "ani": 80.1414, "matched_fragments": 726, "total_fragments": 1653, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga calopogonii", "strain": "strain=CCBAU 65841", "accession": "GCA_003347665.1", "taxid": 2078013, "species_taxid": 2078013, "relation_to_type": "type", "validated": true, "ani": 80.0642, "matched_fragments": 733, "total_fragments": 1653, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga splendida", "strain": "strain=BT325", "accession": "GCA_016427565.1", "taxid": 2795727, "species_taxid": 2795727, "relation_to_type": "type", "validated": true, "ani": 80.0378, "matched_fragments": 667, "total_fragments": 1653, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microvirga aerophila", "strain": "strain=DSM 21344", "accession": "GCA_003332305.1", 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