{
    "type": "genome",
    "identifier": "GCF_020614375.1",
    "organism": "Haladaptatus salinisoli",
    "title": "Haladaptatus salinisoli",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Jiangsu University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_020614375.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN22363859",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "2884876",
        "species_taxid": "2884876",
        "organism_name": "Haladaptatus salinisoli",
        "infraspecific_name": "strain=PSR8",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/10/26",
        "asm_name": "ASM2061437v1",
        "asm_submitter": "Jiangsu University",
        "gbrs_paired_asm": "GCA_020614375.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/020/614/375/GCF_020614375.1_ASM2061437v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "archaea",
        "genome_size": "5035265",
        "genome_size_ungapped": "5035265",
        "gc_percent": "62.000000",
        "replicon_count": "8",
        "scaffold_count": "8",
        "contig_count": "8",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_020614375.1-RS_2024_07_29",
        "annotation_date": "2024-07-29",
        "total_gene_count": "5203",
        "protein_coding_gene_count": "5061",
        "non_coding_gene_count": "59",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-10-26",
    "dateModified": "2021-10-26",
    "datePublished": "2021-10-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Haladaptatus salinisoli"
        ],
        "sample_taxid": [
            "2884876"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Xinjiang"
        ],
        "sample_host_location_id": [],
        "data_size": "1.388 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "5035265",
        "Number of Sequences": "8",
        "Longest Sequences (bp)": "2866551",
        "N50 (bp)": "2866551",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.1",
        "Number of CDSs": "5133",
        "Average Protein Length": "272.1",
        "Coding Ratio (%)": "83.2",
        "Number of rRNAs": "6",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Haladaptatus paucihalophilus",
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                "relation_to_type": "type",
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                "status": "below_threshold"
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            {
                "organism_name": "Haladaptatus paucihalophilus",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Haladaptatus pallidirubidus",
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                "accession": "GCA_020700235.1",
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                "species_taxid": 1008152,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Haladaptatus cibarius",
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                "species_taxid": 453847,
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                "matched_fragments": 731,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Haladaptatus litoreus",
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                "species_taxid": 553468,
                "relation_to_type": "type",
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                "ani": 81.0829,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Haloferax gibbonsii",
                "strain": "strain=ATCC 33959",
                "accession": "GCA_000336775.1",
                "taxid": 35746,
                "species_taxid": 35746,
                "relation_to_type": "type",
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                "ani": 78.1987,
                "matched_fragments": 470,
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                "status": "below_threshold"
            }
        ],
        "cc_result": {
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haladaptataceae;g__Haladaptatus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.84",
                "min_intra_species_ani": "96.52",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_000710615.1",
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haladaptataceae;g__Haladaptatus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            {
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haladaptataceae;g__Haladaptatus",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001625445.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_003298465.1",
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                "mean_intra_species_ani": "N/A",
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            },
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            {
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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        "bacillus_cell_shape": 0.0,
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    "_genome_taxon": [
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        "salinisoli"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}