# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence1:1..810(+)	partial			WP_000453221.1	ISLre2 family transposase	92.9	56.3	54.0
MGA_4	LOCUS_00040	sequence1:4313..4909(-)	partial			WP_002263013.1	hypothetical protein	26.3	24.6	51.9
MGA_36	LOCUS_00360	sequence1:31914..32129(-)	partial			WP_002919288.1	aminoacyltransferase	100.0	17.3	71.8
MGA_37	LOCUS_00370	sequence1:32634..33149(-)	internal_stop_codon	32634..32636(-)		WP_002263312.1	aminoacyltransferase	100.0	41.7	53.2
MGA_38	LOCUS_00380	sequence1:33534..34556(-)	frameshift		34744	WP_011837354.1	TrkH family potassium uptake protein	100.0	71.0	76.5
MGA_39	LOCUS_00390	sequence1:34565..34975(-)	frameshift		34744	WP_001043409.1	TrkH family potassium uptake protein	56.6	16.1	67.5
MGA_40	LOCUS_00400	sequence1:34979..35272(-)	internal_stop_codon	35321..35323(-)		WP_000691695.1	Trk system potassium transporter TrkA	100.0	21.6	78.4
MGA_41	LOCUS_00410	sequence1:35321..36328(-)	internal_stop_codon	35321..35323(-)		WP_011837353.1	Trk system potassium transporter TrkA	99.1	73.9	78.0
MGA_44	LOCUS_00440	sequence1:38198..38458(+)	partial			WP_011837350.1	phosphatase PAP2 family protein	94.2	37.5	64.2
MGA_46	LOCUS_00460	sequence1:39526..39909(+)	partial			WP_011837350.1	phosphatase PAP2 family protein	99.2	58.3	64.3
MGA_55	LOCUS_00550	sequence1:46593..46865(+)	frameshift		46781	WP_002900899.1	GyrI-like domain-containing protein	67.8	29.9	67.2
MGA_56	LOCUS_00560	sequence1:46859..47197(+)	frameshift		46781	WP_002900899.1	GyrI-like domain-containing protein	100.0	54.9	67.0
MGA_69	LOCUS_00690	sequence1:60171..60680(+)	frameshift,internal_stop_codon	60141..60143(+)	60665	WP_011987086.1	TraX family protein	95.9	60.5	28.8
MGA_118	LOCUS_01180	sequence1:108600..108827(+)	frameshift		108577	WP_002900787.1	helix-turn-helix transcriptional regulator	92.0	63.9	81.2
MGA_120	LOCUS_01200	sequence1:109070..109330(+)	partial			WP_000730279.1	DUF3169 family protein	93.0	32.8	55.0
MGA_162	LOCUS_01620	sequence1:157175..157453(+)	internal_stop_codon	157451..157453(+)		WP_002263641.1	GrpB family protein	96.7	44.3	59.6
MGA_163	LOCUS_01630	sequence1:157457..157741(+)	internal_stop_codon	157451..157453(+)		WP_002263641.1	GrpB family protein	98.9	46.3	64.5
MGA_166	LOCUS_01660	sequence1:159009..159182(+)	partial			WP_004612621.1	TfoX/Sxy family protein	93.0	50.0	73.6
MGA_178	LOCUS_01780	sequence1:172059..175505(+)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	84.8	73.2	52.8
MGA_203	LOCUS_02030	sequence1:199667..200005(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	98.2	18.5	90.0
MGA_207	LOCUS_02070	sequence1:202763..203032(+)	frameshift		202727	WP_002681704.1	TfoX/Sxy family protein	100.0	84.0	77.5
MGA_210	LOCUS_02100	sequence1:204191..205651(+)	partial			WP_011241724.1	MobQ family relaxase	79.0	63.0	32.6
MGA_213	LOCUS_02130	sequence1:206945..207157(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	95.7	11.3	100.0
MGA_219	LOCUS_02190	sequence1:211998..213458(+)	partial			WP_011241757.1	MobQ family relaxase	53.1	37.6	42.1
MGA_222	LOCUS_02220	sequence1:214696..215895(+)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	100.0	67.2	97.2
MGA_272	LOCUS_02720	sequence1:273097..274494(+)	partial			WP_146623251.1	beta-glucoside-specific PTS transporter subunit IIABC	98.3	74.2	35.9
MGA_283	LOCUS_02830	sequence1:284390..284560(-)	partial			WP_002895160.1	DUF3042 family protein	71.4	71.4	90.0
MGA_310	LOCUS_03100	sequence1:314713..314847(+)	partial			WP_011836809.1	GNAT family N-acetyltransferase	81.8	24.5	75.0
MGA_383	LOCUS_03830	sequence1:386220..386720(-)	partial			WP_017409206.1	DNA-binding transcriptional regulator OxyR	51.8	28.9	39.5
MGA_387	LOCUS_03870	sequence1:390172..390612(+)	internal_stop_codon	390145..390147(+)		WP_011202637.1	carboxymuconolactone decarboxylase family protein	95.2	50.0	59.0
MGA_395	LOCUS_03950	sequence1:396184..396639(+)	partial			WP_010964318.1	ASCH domain-containing protein	75.5	71.3	43.0
MGA_399	LOCUS_03990	sequence1:399871..400227(+)	partial			WP_000566988.1	GNAT family N-acetyltransferase	100.0	71.1	92.4
MGA_403	LOCUS_04030	sequence1:402993..403838(+)	partial			WP_002262027.1	flavocytochrome c	92.5	32.4	77.7
MGA_409	LOCUS_04090	sequence1:409565..409768(+)	frameshift		409756	WP_011461573.1	alpha/beta hydrolase	80.6	20.2	44.4
MGA_424	LOCUS_04240	sequence1:420939..421502(+)	internal_stop_codon	421500..421502(+)		WP_011836679.1	DUF805 domain-containing protein	81.8	41.2	53.6
MGA_441	LOCUS_04410	sequence1:441502..442848(+)	partial			WP_010966092.1	glycoside hydrolase family 16 protein	41.7	76.8	60.5
MGA_443	LOCUS_04430	sequence1:443760..444527(+)	partial			WP_001067278.1	AraC family transcriptional regulator	87.1	53.5	29.3
MGA_464	LOCUS_04640	sequence1:466093..466269(+)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_509	LOCUS_05090	sequence1:507333..510110(+)	partial			WP_010946812.1	DUF927 domain-containing protein	22.8	39.0	22.0
MGA_516	LOCUS_05160	sequence1:516289..516483(+)	partial			WP_001830627.1	ABC transporter ATP-binding protein	93.8	24.9	53.2
MGA_558	LOCUS_05580	sequence1:564420..564584(-)	frameshift		564437	WP_002284146.1	cell surface ecto-5'-nucleotidase Nt5e	72.2	5.3	61.5
MGA_572	LOCUS_05720	sequence1:576181..576354(-)	frameshift		576198	WP_002262590.1	VOC family protein	89.5	41.9	63.5
MGA_601	LOCUS_06010	sequence1:603780..604106(+)	partial			WP_010968620.1	helix-turn-helix transcriptional regulator	63.9	76.4	40.6
MGA_629	LOCUS_06290	sequence1:630749..631042(-)	frameshift,internal_stop_codon	631049..631051(-)	631181	WP_011837075.1	DUF1697 domain-containing protein	94.8	50.8	72.8
MGA_630	LOCUS_06300	sequence1:631155..631289(-)	frameshift,internal_stop_codon	631049..631051(-)	631181	WP_011837075.1	DUF1697 domain-containing protein	81.8	19.9	86.1
MGA_647	LOCUS_06470	sequence1:650977..651516(-)	internal_stop_codon	651559..651561(-)		WP_012775274.1	pneumococcal-type histidine triad protein	39.7	9.7	51.8
MGA_648	LOCUS_06480	sequence1:651559..652542(-)	frameshift,internal_stop_codon	651558..651560(-)	652631	WP_012775274.1	pneumococcal-type histidine triad protein	98.8	37.8	64.5
MGA_649	LOCUS_06490	sequence1:652875..653051(-)	frameshift,internal_stop_codon	653155..653157(-),652875..652877(-)	653070	WP_012775274.1	pneumococcal-type histidine triad protein	62.1	4.3	70.3
MGA_650	LOCUS_06500	sequence1:653155..653442(-)	frameshift,internal_stop_codon	653155..653157(-)	653094	WP_000678300.1	pneumococcal-type histidine triad protein	100.0	11.7	44.7
MGA_664	LOCUS_06640	sequence1:664438..669831(-)	partial			WP_207215633.1	MucBP domain-containing protein	44.8	70.0	37.2
MGA_675	LOCUS_06750	sequence1:681888..682316(+)	partial			WP_011836891.1	hypothetical protein	70.4	72.5	40.6
MGA_722	LOCUS_07220	sequence1:727305..727445(+)	partial			WP_002897213.1	SPJ_0845 family protein	67.4	68.9	90.3
MGA_765	LOCUS_07650	sequence1:775044..775727(-)	partial			WP_011837123.1	homoserine O-succinyltransferase	99.1	71.6	78.2
MGA_769	LOCUS_07690	sequence1:778827..779258(+)	partial			WP_003722868.1	YdcF family protein	94.4	39.0	49.6
MGA_819	LOCUS_08190	sequence1:840190..840360(+)	frameshift		840324	WP_010905663.1	metallophosphoesterase	80.4	18.5	55.6
MGA_820	LOCUS_08200	sequence1:840372..840974(+)	frameshift,internal_stop_codon	840973..840975(+)	840348	WP_011836763.1	metallophosphoesterase	100.0	69.9	68.5
MGA_829	LOCUS_08290	sequence1:851971..853149(-)	partial			WP_002680450.1	TPM domain-containing protein	51.8	76.1	34.4
MGA_877	LOCUS_08770	sequence1:907945..908541(-)	frameshift		907986	WP_002903178.1	GNAT family N-acetyltransferase	88.4	70.9	49.1
MGA_881	LOCUS_08810	sequence1:910228..910740(-)	frameshift		910820	WP_002262444.1	RpiB/LacA/LacB family sugar-phosphate isomerase	91.2	73.8	61.9
MGA_891	LOCUS_08910	sequence1:918336..918818(-)	internal_stop_codon	918822..918824(-)		WP_011837280.1	ABC transporter ATP-binding protein	100.0	55.6	61.9
MGA_892	LOCUS_08920	sequence1:918822..919202(-)	internal_stop_codon	918822..918824(-)		WP_011837280.1	ABC transporter ATP-binding protein	100.0	43.8	71.4
MGA_907	LOCUS_09070	sequence1:932923..933156(-)	partial			WP_002262696.1	hypothetical protein	66.2	63.0	70.6
MGA_973	LOCUS_09730	sequence1:1000475..1000825(-)	internal_stop_codon	1000475..1000477(-)		WP_168747012.1	DNA cytosine methyltransferase	90.5	27.8	45.7
MGA_997	LOCUS_09970	sequence1:1025890..1026204(-)	partial			WP_002983650.1	DNA-directed RNA polymerase subunit omega	62.5	61.9	92.3
MGA_1040	LOCUS_10400	sequence1:1072917..1073144(-)	internal_stop_codon	1072917..1072919(-)		WP_002893668.1	response regulator transcription factor	100.0	37.7	78.7
MGA_1061	LOCUS_10610	sequence1:1094110..1094571(-)	partial			WP_001166913.1	hypothetical protein	95.4	34.9	54.8
MGA_1063	LOCUS_10630	sequence1:1094979..1095824(-)	partial			WP_010989483.1	hypothetical protein	84.3	69.6	24.1
MGA_1128	LOCUS_11270	sequence1:1159637..1160098(-)	frameshift		1160075	WP_009931832.1	glycoside hydrolase family 1 protein	90.2	28.4	79.0
MGA_1129	LOCUS_11280	sequence1:1160067..1160939(-)	frameshift,internal_stop_codon	1161030..1161032(-)	1160075	WP_009931832.1	glycoside hydrolase family 1 protein	100.0	59.5	62.5
MGA_1131	LOCUS_11300	sequence1:1162496..1162837(-)	frameshift		1163122,1162947	WP_011836499.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	86.7	13.1	95.9
MGA_1132	LOCUS_11310	sequence1:1163117..1163794(-)	frameshift		1163122,1162947	WP_011836499.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	99.6	29.9	87.5
MGA_1134	LOCUS_11330	sequence1:1164046..1164537(-)	partial			WP_011836499.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	95.7	20.8	89.1
MGA_1146	LOCUS_11450	sequence1:1177107..1181087(-)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	52.6	52.2	43.4
MGA_1167	LOCUS_11660	sequence1:1201919..1206364(-)	partial			WP_164691239.1	SpaA isopeptide-forming pilin-related protein	87.6	38.9	21.3
MGA_1170	LOCUS_11690	sequence1:1207859..1208563(-)	frameshift		1208507	WP_012027102.1	permease	90.2	69.4	39.8
MGA_1211	LOCUS_12100	sequence1:1255926..1256186(+)	partial			WP_002359328.1	DUF3173 domain-containing protein	67.4	81.4	48.3
MGA_1221	LOCUS_12200	sequence1:1265322..1271594(-)	partial			WP_011836823.1	GbpC/Spa domain-containing protein	21.5	32.2	34.2
MGA_1222	LOCUS_12210	sequence1:1271620..1273041(-)	partial			WP_002358661.1	LPXTG cell wall anchor domain-containing protein	18.2	81.7	40.0
MGA_1241	LOCUS_12390	sequence1:1294667..1300573(-)	partial			WP_011068088.1	FctA domain-containing protein	51.4	43.1	32.5
MGA_1331	LOCUS_13280	sequence1:1397600..1398100(+)	partial			WP_001197951.1	YehR family lipoprotein	68.7	63.6	34.2
MGA_1342	LOCUS_13380	sequence1:1406739..1408589(-)	partial			WP_011837728.1	YfhO family protein	99.7	71.3	64.2
MGA_1345	LOCUS_13410	sequence1:1411721..1412410(+)	partial			WP_011141042.1	triose-phosphate isomerase	65.9	63.8	30.0
MGA_1374	LOCUS_13700	sequence1:1442198..1442941(-)	internal_stop_codon	1443002..1443004(-)		WP_011837644.1	Rgg/GadR/MutR family transcriptional regulator	94.3	83.3	42.4
MGA_1376	LOCUS_13720	sequence1:1443879..1444397(+)	partial			WP_012028596.1	thiol reductase thioredoxin	65.1	74.5	35.1
MGA_1382	LOCUS_13780	sequence1:1450079..1451074(-)	partial			WP_011837698.1	DUF1700 domain-containing protein	27.8	44.7	54.3
MGA_1393	LOCUS_13890	sequence1:1461543..1462322(+)	partial			WP_002322202.1	hypothetical protein	84.6	38.7	37.8
MGA_1394	LOCUS_13900	sequence1:1462327..1462845(+)	frameshift		1462226,1462235	WP_012775361.1	membrane protein	75.0	23.4	27.2
MGA_1398	LOCUS_13940	sequence1:1466287..1467024(-)	partial			WP_010989677.1	FtsK/SpoIIIE domain-containing protein	71.0	39.5	30.3
MGA_1404	LOCUS_14000	sequence1:1470076..1472946(+)	partial			WP_013399720.1	FIVAR domain-containing protein	91.5	33.6	22.8
MGA_1409	LOCUS_14050	sequence1:1476212..1476520(-)	partial			WP_006268963.1	hypothetical protein	100.0	50.7	99.0
MGA_1438	LOCUS_14340	sequence1:1508671..1509396(+)	internal_stop_codon	1508536..1508538(+)		WP_055164393.1	IS30 family transposase	93.8	71.7	66.2
MGA_1451	LOCUS_14470	sequence1:1518642..1519079(+)	partial			WP_002917849.1	SP_0198 family lipoprotein	71.7	67.9	46.3
MGA_1467	LOCUS_14630	sequence1:1534528..1535073(+)	partial			WP_011963380.1	serine acetyltransferase	62.4	60.9	47.4
MGA_1475	LOCUS_14710	sequence1:1542499..1545048(+)	partial			WP_000671444.1	fibronectin-binding SSURE repeat adhesin PavB	88.1	64.2	55.2
MGA_1484	LOCUS_14800	sequence1:1553299..1553625(+)	internal_stop_codon	1553623..1553625(+)		WP_011836334.1	uridine kinase	95.4	48.6	67.0
MGA_1485	LOCUS_14810	sequence1:1553674..1553946(+)	internal_stop_codon	1553623..1553625(+)		WP_011836334.1	uridine kinase	94.4	40.1	60.0
MGA_1518	LOCUS_15140	sequence1:1574604..1579214(+)	frameshift,internal_stop_codon	1579200..1579202(+),1579206..1579208(+),1579212..1579214(+)	1579193,1579238	WP_011837563.1	Cna B-type domain-containing protein	52.6	49.3	32.9
MGA_1519	LOCUS_15150	sequence1:1579293..1579949(+)	frameshift,internal_stop_codon	1579212..1579214(+)	1579211,1579238	WP_011837563.1	Cna B-type domain-containing protein	84.4	11.8	40.0
MGA_1520	LOCUS_15160	sequence1:1580330..1580680(-)	partial			WP_002902079.1	hypothetical protein	100.0	71.6	44.0
MGA_1528	LOCUS_15240	sequence1:1588834..1589094(+)	partial			WP_002263364.1	zinc-dependent alcohol dehydrogenase family protein	96.5	23.8	72.3
MGA_1531	LOCUS_15270	sequence1:1590831..1591373(+)	frameshift		1591307	WP_003548211.1	beta-glucoside-specific PTS transporter subunit IIABC	87.2	21.7	43.4
MGA_1532	LOCUS_15280	sequence1:1591352..1592683(+)	frameshift		1591313	WP_011254503.1	glucose PTS transporter subunit IIA	99.8	79.1	58.2
MGA_1543	LOCUS_15390	sequence1:1603278..1604006(+)	partial			WP_002262417.1	hypothetical protein	40.9	76.9	73.0
MGA_1653	LOCUS_16490	sequence1:1717015..1717725(+)	frameshift,internal_stop_codon	1716992..1716994(+)	1716835	WP_115283723.1	IS3 family transposase	99.2	52.0	83.8
MGA_1670	LOCUS_16660	sequence1:1732820..1733380(+)	frameshift,internal_stop_codon	1733361..1733363(+),1732773..1732775(+)	1732544,1733318	WP_102777394.1	IS3 family transposase	88.7	43.9	81.2
MGA_1685	LOCUS_16810	sequence1:1751864..1752304(-)	partial			WP_115276001.1	ISL3 family transposase	97.3	34.9	71.2
MGA_1771	LOCUS_17670	sequence1:1846082..1847158(+)	partial			WP_002365949.1	replication initiator protein A	61.2	60.1	28.1
MGA_1773	LOCUS_17690	sequence1:1847431..1847697(+)	partial			WP_001080846.1	helix-turn-helix transcriptional regulator	67.0	41.8	55.9
MGA_1776	LOCUS_17720	sequence1:1851147..1854926(+)	partial			WP_000167699.1	GbpC/Spa domain-containing protein	92.1	71.9	29.5
