# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_29	LOCUS_00290	sequence1:34442..34642(+)	partial			WP_099835063.1	IS3 family transposase	69.7	12.1	69.6
MGA_33	LOCUS_00330	sequence1:39714..40346(+)	partial			WP_166061917.1	restriction endonuclease subunit S	93.8	50.1	39.6
MGA_59	LOCUS_00590	sequence1:72450..75857(-)	partial			WP_011082831.1	MSCRAMM family adhesin SdrF	87.3	58.4	37.4
MGA_61	LOCUS_00610	sequence1:77669..78313(-)	frameshift		77707	WP_001832893.1	membrane protein insertase YidC	93.0	71.9	46.0
MGA_93	LOCUS_00930	sequence1:114780..115166(+)	partial			WP_000093392.1	IS200/IS605 family transposase	93.8	74.5	91.7
MGA_104	LOCUS_01040	sequence1:124458..124730(-)	partial			WP_001550030.1	hypothetical protein	66.7	64.5	41.7
MGA_118	LOCUS_01180	sequence1:138206..139582(+)	internal_stop_codon	139580..139582(+)		WP_002864485.1	type II CRISPR RNA-guided endonuclease Cas9	98.5	45.9	24.0
MGA_119	LOCUS_01190	sequence1:139622..141373(+)	internal_stop_codon	139580..139582(+)		WP_010922251.1	type II CRISPR RNA-guided endonuclease Cas9	41.0	17.3	30.8
MGA_126	LOCUS_01260	sequence1:147810..149030(+)	partial			WP_010964760.1	AraC family transcriptional regulator	44.6	64.1	34.2
MGA_147	LOCUS_01470	sequence1:178626..179387(+)	frameshift		178527	WP_000916728.1	accessory Sec system protein Asp3	96.8	81.8	32.5
MGA_157	LOCUS_01570	sequence1:187290..187478(-)	frameshift,internal_stop_codon	187652..187654(-),187664..187666(-)	187297,187498,187670	WP_103357905.1	protein rep	96.8	19.5	78.3
MGA_186	LOCUS_01860	sequence1:219525..220529(+)	partial			WP_000727772.1	zinc ABC transporter substrate-binding lipoprotein AdcA	99.7	62.3	56.9
MGA_207	LOCUS_02070	sequence1:242162..243406(+)	partial			WP_005071062.1	mechanosensitive ion channel	72.5	50.6	23.4
MGA_209	LOCUS_02090	sequence1:244618..245325(+)	partial			WP_002485463.1	poly-gamma-glutamate hydrolase family protein	91.1	48.1	43.0
MGA_223	LOCUS_02230	sequence1:260511..261980(-)	partial			WP_003243980.1	two-component system sensor histidine kinase YvrG	56.4	51.9	27.2
MGA_225	LOCUS_02250	sequence1:262873..263739(+)	internal_stop_codon	263737..263739(+)		WP_000215631.1	HoxN/HupN/NixA family nickel/cobalt transporter	95.8	81.7	67.4
MGA_243	LOCUS_02430	sequence1:283560..283964(+)	internal_stop_codon	283962..283964(+)		WP_000972657.1	tandem-type lipoprotein	80.6	38.0	29.6
MGA_249	LOCUS_02490	sequence1:290533..292875(-)	partial			WP_000745891.1	MSCRAMM family adhesin clumping factor ClfB	73.7	61.0	39.7
MGA_260	LOCUS_02600	sequence1:303792..304646(+)	frameshift		304619	WP_002484944.1	aminoacyltransferase	97.9	67.2	63.1
MGA_261	LOCUS_02610	sequence1:304643..305035(+)	frameshift		304622	WP_001012225.1	FemA/FemB family glycyltransferase FmhA	100.0	31.2	73.1
MGA_273	LOCUS_02730	sequence1:314212..315534(-)	partial			WP_001125628.1	amidase domain-containing protein	94.8	68.5	46.5
MGA_274	LOCUS_02740	sequence1:315732..317471(+)	partial			WP_000786115.1	YhgE/Pip domain-containing protein	61.5	32.8	33.1
MGA_289	LOCUS_02890	sequence1:329285..331150(+)	partial			WP_002370472.1	glycosyltransferase family A protein	34.8	44.9	30.8
MGA_322	LOCUS_03220	sequence1:361409..362773(+)	partial			WP_002437845.1	YSIRK domain-containing triacylglycerol lipase GehC	90.1	59.9	71.6
MGA_323	LOCUS_03230	sequence1:363004..363357(+)	frameshift		363345	WP_009931149.1	GNAT family N-acetyltransferase	83.8	64.1	35.7
MGA_332	LOCUS_03320	sequence1:371002..375567(+)	partial			WP_015704442.1	putative mucin/carbohydrate-binding domain-containing protein	37.9	57.7	27.4
MGA_344	LOCUS_03440	sequence1:389278..396765(+)	partial			WP_003147473.1	Ig-like domain-containing protein	66.3	62.7	38.2
MGA_361	LOCUS_03610	sequence1:413619..413948(-)	internal_stop_codon	413949..413951(-)		WP_000071904.1	pyridoxamine 5'-phosphate oxidase family protein	97.2	75.7	47.2
MGA_411	LOCUS_04110	sequence1:477487..478116(+)	partial			WP_000821402.1	DUF1775 domain-containing protein	69.9	72.3	43.0
MGA_428	LOCUS_04280	sequence1:496172..496753(-)	partial			WP_001549718.1	YdcF family protein	90.7	58.4	48.4
MGA_498	LOCUS_04980	sequence1:566230..566910(+)	internal_stop_codon	566116..566118(+)		WP_000735038.1	ABC transporter substrate-binding protein	100.0	74.5	58.0
MGA_519	LOCUS_05190	sequence1:582913..584745(-)	partial			WP_012775697.1	DUF6359 domain-containing protein	95.4	55.0	43.1
MGA_567	LOCUS_05670	sequence1:618318..618845(-)	partial			WP_002287688.1	tyrosine-type recombinase/integrase	95.4	42.6	44.0
MGA_568	LOCUS_05680	sequence1:618870..618995(-)	partial			WP_099835063.1	IS3 family transposase	100.0	10.8	78.0
MGA_570	LOCUS_05700	sequence1:619276..619512(+)	frameshift		619441,619282,619489	WP_001668899.1	virulence-associated E family protein	69.2	11.0	57.4
MGA_574	LOCUS_05740	sequence1:621368..623011(+)	internal_stop_codon	621347..621349(+),623009..623011(+)		WP_011102960.1	DEAD/DEAH box helicase family protein	100.0	33.8	40.9
MGA_575	LOCUS_05750	sequence1:623027..623791(+)	internal_stop_codon	623009..623011(+)		WP_011015608.1	DEAD/DEAH box helicase	99.2	15.1	39.4
MGA_576	LOCUS_05760	sequence1:623937..625103(+)	partial			WP_011104962.1	SIR2 family protein	58.5	71.2	31.5
MGA_615	LOCUS_06130	sequence1:671100..671966(-)	partial			WP_000495671.1	lytic regulatory protein	73.3	62.0	30.5
MGA_651	LOCUS_06490	sequence1:708069..708434(+)	frameshift		708043	WP_001801792.1	ATP synthase subunit I	94.2	76.0	48.2
MGA_666	LOCUS_06640	sequence1:719229..719972(+)	partial			WP_010706701.1	autolysin	22.3	7.5	45.5
MGA_717	LOCUS_07140	sequence1:775541..776434(-)	partial			WP_000447888.1	sensor histidine kinase	98.7	68.6	49.5
MGA_726	LOCUS_07230	sequence1:783911..784093(+)	partial			WP_000278088.1	staphylococcal enterotoxin type C3	85.0	19.2	64.7
MGA_727	LOCUS_07240	sequence1:784254..784772(-)	partial			WP_010989338.1	trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase	95.9	47.1	45.8
MGA_804	LOCUS_08010	sequence1:859084..859971(-)	frameshift		860009	WP_002457098.1	aromatic acid exporter family protein	100.0	81.0	60.7
MGA_805	LOCUS_08020	sequence1:859992..860177(-)	frameshift		860009	WP_001236371.1	aromatic acid exporter family protein	91.8	15.4	64.3
MGA_814	LOCUS_08080	sequence1:872435..873736(+)	partial			WP_000842040.1	YSIRK domain-containing triacylglycerol lipase Lip1	87.5	55.9	59.7
MGA_820	LOCUS_08140	sequence1:879268..879423(+)	partial			WP_002468490.1	SAS053 family protein	84.3	72.9	67.4
MGA_828	LOCUS_08220	sequence1:888470..891184(+)	partial			WP_000794614.1	fibronectin-binding protein FnbA	74.6	64.8	34.6
MGA_846	LOCUS_08400	sequence1:909545..910075(-)	partial			WP_003239501.1	HTH-type transcriptional regulator Hpr	85.8	74.4	40.4
MGA_864	LOCUS_08580	sequence1:923247..923507(+)	partial			WP_001002340.1	hypothetical protein	61.6	77.9	69.8
MGA_929	LOCUS_09230	sequence1:981431..984712(+)	partial			WP_002456455.1	DNA translocase FtsK	61.8	56.4	29.5
MGA_982	LOCUS_09760	sequence1:1047089..1047421(+)	partial			WP_001830825.1	transcriptional regulator NrdR	100.0	70.5	80.0
MGA_1077	LOCUS_10710	sequence1:1145375..1145551(+)	partial			WP_000048060.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1100	LOCUS_10940	sequence1:1166382..1166696(+)	frameshift		1166651	WP_099835063.1	IS3 family transposase	96.2	26.3	78.0
MGA_1101	LOCUS_10950	sequence1:1167053..1167523(+)	partial			WP_099835063.1	IS3 family transposase	100.0	41.1	94.2
MGA_1254	LOCUS_12480	sequence1:1319836..1320117(-)	internal_stop_codon	1320148..1320150(-)		WP_000283016.1	Y-family DNA polymerase	94.6	21.0	47.7
MGA_1255	LOCUS_12490	sequence1:1320148..1321005(-)	internal_stop_codon	1320148..1320150(-)		WP_001831129.1	Y-family DNA polymerase	100.0	67.9	68.4
MGA_1278	LOCUS_12720	sequence1:1350989..1351216(-)	partial			WP_001548645.1	YneF family protein	76.0	60.0	66.7
MGA_1283	LOCUS_12770	sequence1:1355095..1356504(-)	partial			WP_000157953.1	sucrose-specific PTS transporter subunit IIBC	99.6	72.9	56.2
MGA_1311	LOCUS_13050	sequence1:1381479..1382273(-)	partial			WP_000676539.1	Glu-specific serine endopeptidase SspA	81.4	62.3	32.9
MGA_1321	LOCUS_13150	sequence1:1391591..1391986(-)	frameshift,internal_stop_codon	1392016..1392018(-)	1391988	WP_001557163.1	ISL3-like element IS1181 family transposase	69.5	20.7	45.1
MGA_1450	LOCUS_14440	sequence1:1539007..1539894(-)	partial			WP_002470268.1	FtsQ-type POTRA domain-containing protein	99.7	63.1	41.2
MGA_1469	LOCUS_14630	sequence1:1556491..1558329(-)	partial			WP_000841404.1	fibronectin-binding protein FnbB	76.6	50.5	33.8
MGA_1559	LOCUS_15530	sequence1:1648628..1649977(-)	partial			WP_011986995.1	glycosyltransferase family 4 protein	64.4	75.6	26.8
MGA_1560	LOCUS_15540	sequence1:1650112..1651020(-)	partial			WP_003227930.1	teichoic acids export ABC transporter ATP-binding subunit TagH	85.1	48.2	49.4
MGA_1564	LOCUS_15580	sequence1:1654136..1655272(-)	partial			WP_011020842.1	glycosyltransferase family 4 protein	37.6	37.0	31.0
MGA_1565	LOCUS_15590	sequence1:1655272..1657830(-)	partial			WP_002383750.1	glycosyltransferase	25.4	62.3	31.5
MGA_1585	LOCUS_15790	sequence1:1681439..1682266(+)	partial			WP_000676539.1	Glu-specific serine endopeptidase SspA	89.5	62.9	27.2
MGA_1586	LOCUS_15800	sequence1:1683447..1684202(+)	partial			WP_001829860.1	serine protease	75.3	61.7	31.7
MGA_1587	LOCUS_15810	sequence1:1685141..1685428(-)	partial			WP_001148136.1	SH3 domain-containing protein	87.4	17.3	44.6
MGA_1590	LOCUS_15840	sequence1:1686900..1687721(+)	frameshift		1686856,1686625	WP_099434174.1	IS3-like element ISEfa8 family transposase	94.5	65.1	53.5
MGA_1599	LOCUS_15930	sequence1:1694887..1695708(+)	frameshift		1694843,1694612	WP_099434174.1	IS3-like element ISEfa8 family transposase	94.5	65.1	53.5
MGA_1608	LOCUS_16020	sequence1:1703448..1705052(-)	partial			WP_001795272.1	S1C family serine protease	92.9	62.7	40.6
MGA_1664	LOCUS_16580	sequence1:1767084..1767710(+)	partial			WP_003130354.1	hypothetical protein	68.8	64.8	29.9
MGA_1725	LOCUS_17190	sequence1:1821815..1822330(+)	partial			WP_001829623.1	GNAT family N-acetyltransferase	68.4	67.5	46.2
MGA_1745	LOCUS_17390	sequence1:1843180..1843383(+)	partial			WP_001548522.1	TM2 domain-containing protein	100.0	72.8	65.7
MGA_1748	LOCUS_17420	sequence1:1844740..1845492(-)	partial			WP_010990014.1	autolysin Ami	81.6	22.2	46.6
MGA_1749	LOCUS_17430	sequence1:1845865..1846395(-)	partial			WP_001041666.1	LysM peptidoglycan-binding domain-containing protein	90.3	43.0	38.8
MGA_1752	LOCUS_17460	sequence1:1848075..1849457(-)	partial			WP_000861035.1	CHAP domain-containing protein	34.8	63.8	49.1
MGA_1753	LOCUS_17470	sequence1:1849435..1849782(-)	frameshift		1849894	WP_000354127.1	phage holin	53.9	44.1	51.6
MGA_1754	LOCUS_17480	sequence1:1849980..1850987(-)	internal_stop_codon	1851003..1851005(-)		WP_000276646.1	BppU family phage baseplate upper protein	38.5	31.3	58.1
MGA_1755	LOCUS_17490	sequence1:1851003..1851215(-)	internal_stop_codon	1851003..1851005(-)		WP_000276646.1	BppU family phage baseplate upper protein	98.6	16.7	53.6
MGA_1763	LOCUS_17570	sequence1:1860145..1861080(-)	partial			WP_000350686.1	phage tail family protein	62.7	60.0	37.3
MGA_1776	LOCUS_17700	sequence1:1868989..1869942(-)	partial			WP_011109439.1	NAD+--arginine ADP-ribosyltransferase EFV	94.6	59.3	26.2
MGA_1778	LOCUS_17720	sequence1:1871325..1871627(-)	partial			WP_000830192.1	PBSX family phage terminase large subunit	96.0	23.0	69.8
MGA_1796	LOCUS_17900	sequence1:1879291..1880088(-)	partial			WP_010965237.1	phage replisome organizer N-terminal domain-containing protein	54.3	51.6	50.0
MGA_1831	LOCUS_18250	sequence1:1908581..1909147(-)	frameshift		1908595	WP_001057965.1	ComF family protein	96.8	83.0	37.1
MGA_1832	LOCUS_18260	sequence1:1909144..1909773(-)	internal_stop_codon	1909906..1909908(-)		WP_001557172.1	DEAD/DEAH box helicase	99.5	57.8	49.5
MGA_1833	LOCUS_18270	sequence1:1909906..1910433(-)	internal_stop_codon	1909906..1909908(-)		WP_171004420.1	DEAD/DEAH box helicase family protein	92.6	38.4	51.2
MGA_1882	LOCUS_18760	sequence1:1962637..1962903(+)	partial			WP_002438864.1	hypothetical protein	72.7	71.9	45.3
MGA_1922	LOCUS_19160	sequence1:1997250..1998137(-)	frameshift		1997264	WP_000184741.1	iron ABC transporter permease	95.9	84.7	58.0
MGA_1981	LOCUS_19750	sequence1:2053694..2054155(-)	partial			WP_004596005.1	ABC transporter ATP-binding protein	79.1	20.5	34.1
MGA_1982	LOCUS_19760	sequence1:2054554..2054892(-)	internal_stop_codon	2054893..2054895(-)		WP_003641446.1	GNAT family protein	94.6	57.6	35.8
MGA_2018	LOCUS_20120	sequence1:2080273..2080494(+)	partial			WP_012775654.1	site-specific integrase	93.2	17.9	57.4
MGA_2037	LOCUS_20310	sequence1:2103589..2104173(-)	partial			WP_002445734.1	RNA polymerase sigma factor	69.6	71.7	29.9
MGA_2137	LOCUS_21280	sequence1:2226819..2228489(-)	internal_stop_codon	2228547..2228549(-)		WP_000728958.1	type VII secretion protein EsaA	99.5	54.0	53.0
MGA_2138	LOCUS_21290	sequence1:2228547..2229872(-)	internal_stop_codon	2228547..2228549(-)		WP_000728958.1	type VII secretion protein EsaA	98.9	43.2	47.3
MGA_2165	LOCUS_21560	sequence1:2250181..2250312(-)	frameshift,internal_stop_codon	2250181..2250183(-)	2250057,2250177,2250171	WP_000486487.1	ABC transporter ATP-binding protein	100.0	7.5	88.4
MGA_2169	LOCUS_21600	sequence1:2251663..2252088(+)	partial			WP_011082784.1	DsbA family protein	97.2	69.2	56.2
MGA_2174	LOCUS_21650	sequence1:2256577..2256711(-)	partial			WP_000447709.1	DUF4176 domain-containing protein	97.7	43.9	74.4
MGA_2176	LOCUS_21670	sequence1:2257350..2257667(-)	partial			WP_000020814.1	T7SS effector LXG polymorphic toxin	98.1	22.0	60.2
MGA_2184	LOCUS_21750	sequence1:2266040..2266642(+)	partial			WP_000956137.1	hypothetical protein	94.5	59.7	62.6
MGA_2195	LOCUS_21860	sequence1:2277645..2278046(+)	frameshift,internal_stop_codon	2278044..2278046(+)	2278280	WP_001105984.1	IS6-like element IS257 family transposase	100.0	59.4	95.5
MGA_2196	LOCUS_21870	sequence1:2278068..2278310(+)	frameshift,internal_stop_codon	2278044..2278046(+)	2278280	WP_001106006.1	IS6-like element IS257 family transposase	88.8	31.7	94.4
MGA_2237	LOCUS_22280	sequence1:2316899..2317036(-)	partial			WP_000240855.1	50S ribosomal protein L34	60.0	60.0	100.0
MGA_2239	LOCUS_22300	sequence2:1819..2022(+)	partial			WP_003246542.1	glucose starvation-inducible protein GsiB	74.6	40.7	70.0
MGA_2240	LOCUS_22310	sequence2:2100..2612(-)	frameshift		2647	WP_000691527.1	putative immunity/bacteriocin fusion bifunctional protein	100.0	77.4	65.2
