{
    "type": "genome",
    "identifier": "GCF_020889625.1",
    "organism": "Deinococcus radiophilus",
    "title": "Deinococcus radiophilus",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Binomica Labs",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_020889625.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN22895843",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "32062",
        "species_taxid": "32062",
        "organism_name": "Deinococcus radiophilus",
        "infraspecific_name": "strain=ATCC 27603",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/11/19",
        "asm_name": "ASM2088962v1",
        "asm_submitter": "Binomica Labs",
        "gbrs_paired_asm": "GCA_020889625.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/020/889/625/GCF_020889625.1_ASM2088962v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2827165",
        "genome_size_ungapped": "2827165",
        "gc_percent": "62.500000",
        "replicon_count": "7",
        "scaffold_count": "7",
        "contig_count": "7",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_020889625.1-RS_2024_12_09",
        "annotation_date": "2024-12-09",
        "total_gene_count": "2852",
        "protein_coding_gene_count": "2731",
        "non_coding_gene_count": "61",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-11-19",
    "dateModified": "2021-11-19",
    "datePublished": "2021-11-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Deinococcus radiophilus"
        ],
        "sample_taxid": [
            "32062"
        ],
        "sample_host_organism": [
            "Harpadon nehereus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "India: Mumbai"
        ],
        "sample_host_location_id": [],
        "data_size": "0.792 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2827165",
        "Number of Sequences": "7",
        "Longest Sequences (bp)": "2152572",
        "N50 (bp)": "2152572",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.5",
        "Number of CDSs": "2805",
        "Average Protein Length": "296.5",
        "Coding Ratio (%)": "88.3",
        "Number of rRNAs": "6",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Deinococcus radiophilus",
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                "validated": true,
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                "status": "conclusive"
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                "status": "conclusive"
            },
            {
                "organism_name": "Deinococcus proteolyticus",
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                "species_taxid": 55148,
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "strain": "strain=R1",
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                "species_taxid": 1299,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 245,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus multiflagellatus",
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                "accession": "GCA_020166415.1",
                "taxid": 1656887,
                "species_taxid": 1656887,
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                "validated": true,
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                "matched_fragments": 258,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus radiodurans",
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                "species_taxid": 1299,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0728,
                "matched_fragments": 234,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus arcticus",
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                "accession": "GCA_003028415.1",
                "taxid": 2136176,
                "species_taxid": 2136176,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 265,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus budaensis",
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                "status": "below_threshold"
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            {
                "organism_name": "Deinococcus aerolatus",
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                "species_taxid": 522487,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus phoenicis",
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                "ani": 77.6228,
                "matched_fragments": 236,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus xianganensis",
                "strain": "strain=Y35",
                "accession": "GCA_009834985.1",
                "taxid": 1507289,
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                "relation_to_type": "type",
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                "ani": 77.3077,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
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        "gtdb_result": [
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                "accession": "GCF_003966215.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            {
                "accession": "GCF_014653275.1",
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    "_bac2feature": {
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}