{ "type": "genome", "identifier": "GCF_020889705.1", "organism": "Bradyrhizobium altum", "title": "Bradyrhizobium altum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Pretoria", "publication": [ {} ], "properties": { "assembly_accession": "GCF_020889705.1", "bioproject": "PRJNA224116", "biosample": "SAMN15826095", "wgs_master": "JACMYP000000000.1", "refseq_category": "reference genome", "taxid": "1571202", "species_taxid": "1571202", "organism_name": "Bradyrhizobium altum", "infraspecific_name": "strain=Pear77", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/11/19", "asm_name": "ASM2088970v1", "asm_submitter": "University of Pretoria", "gbrs_paired_asm": "GCA_020889705.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/020/889/705/GCF_020889705.1_ASM2088970v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9758985", "genome_size_ungapped": "9758985", "gc_percent": "63.500000", "replicon_count": "0", "scaffold_count": "613", "contig_count": "613", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_020889705.1-RS_2024_09_27", "annotation_date": "2024-09-27", "total_gene_count": "9612", "protein_coding_gene_count": "8957", "non_coding_gene_count": "65", "pubmed_id": "34757168" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-11-19", "dateModified": "2021-11-19", "datePublished": "2021-11-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Bradyrhizobium altum" ], "sample_taxid": [ "1571202" ], "sample_host_organism": [ "Pearsonia obovata" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"total_fragments": 2966, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Bradyrhizobium quebecense", "strain": "strain=66S1MB, /ecotype=symbiovar septentrionalis", "accession": "GCA_013373795.3", "taxid": 2748629, "species_taxid": 2748629, "relation_to_type": "type", "validated": true, "ani": 94.3199, "matched_fragments": 2133, "total_fragments": 2966, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium oropedii", "strain": "strain=Pear76", "accession": "GCA_020889685.1", "taxid": 1571201, "species_taxid": 1571201, "relation_to_type": "type", "validated": true, "ani": 92.641, "matched_fragments": 2229, "total_fragments": 2966, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium embrapense", "strain": "strain=SEMIA 6208", "accession": "GCA_001189235.2", "taxid": 630921, "species_taxid": 630921, "relation_to_type": "type", "validated": true, "ani": 91.9222, "matched_fragments": 2114, 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"status": "below_threshold" }, { "organism_name": "Bradyrhizobium uaiense", "strain": "strain=UFLA03-164", "accession": "GCA_010811875.1", "taxid": 2594946, "species_taxid": 2594946, "relation_to_type": "type", "validated": true, "ani": 90.6566, "matched_fragments": 2024, "total_fragments": 2966, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium pachyrhizi", "strain": "strain=PAC 48", "accession": "GCA_001189245.1", "taxid": 280333, "species_taxid": 280333, "relation_to_type": "type", "validated": true, "ani": 90.5746, "matched_fragments": 2020, "total_fragments": 2966, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium elkanii", "strain": "strain=USDA 76", "accession": "GCA_023278185.1", "taxid": 29448, "species_taxid": 29448, "relation_to_type": "type", "validated": true, "ani": 90.5375, "matched_fragments": 2076, "total_fragments": 2966, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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