{
    "type": "genome",
    "identifier": "GCF_021044795.1",
    "organism": "Acidaminococcus hominis",
    "title": "Acidaminococcus hominis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute Of Microbiology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_021044795.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN23394391",
        "wgs_master": "JAJNOP000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2897706",
        "species_taxid": "2897706",
        "organism_name": "Acidaminococcus hominis",
        "infraspecific_name": "strain=NSJ-142",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/12/05",
        "asm_name": "ASM2104479v1",
        "asm_submitter": "Institute Of Microbiology",
        "gbrs_paired_asm": "GCA_021044795.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/021/044/795/GCF_021044795.1_ASM2104479v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2631693",
        "genome_size_ungapped": "2631693",
        "gc_percent": "53.000000",
        "replicon_count": "0",
        "scaffold_count": "116",
        "contig_count": "116",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_021044795.1-RS_2024_03_28",
        "annotation_date": "2024-03-28",
        "total_gene_count": "2359",
        "protein_coding_gene_count": "2270",
        "non_coding_gene_count": "79",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-12-05",
    "dateModified": "2021-12-05",
    "datePublished": "2021-12-05",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acidaminococcus hominis"
        ],
        "sample_taxid": [
            "2897706"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Beijing"
        ],
        "sample_host_location_id": [],
        "data_size": "0.741 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2631693",
        "Number of Sequences": "116",
        "Longest Sequences (bp)": "266997",
        "N50 (bp)": "69567",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.0",
        "Number of CDSs": "2274",
        "Average Protein Length": "319.6",
        "Coding Ratio (%)": "82.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "4"
    },
    "has_analysis": true,
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                "organism_name": "Acidaminococcus provencensis",
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                "accession": "GCA_900291475.1",
                "taxid": 2058289,
                "species_taxid": 2058289,
                "relation_to_type": "type",
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                "ani_threshold": 95,
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            {
                "organism_name": "Acidaminococcus fermentans",
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                "taxid": 905,
                "species_taxid": 905,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acidaminococcus timonensis",
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                "species_taxid": 1871002,
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                "ani": 79.9234,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Acidaminococcus massiliensis",
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                "taxid": 1852375,
                "species_taxid": 1852375,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.7783,
                "matched_fragments": 348,
                "total_fragments": 828,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acidaminococcus intestini",
                "strain": "strain=DSM 21505",
                "accession": "GCA_000425045.1",
                "taxid": 187327,
                "species_taxid": 187327,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8863,
                "matched_fragments": 124,
                "total_fragments": 828,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Succiniclasticum ruminis",
                "strain": "strain=DSM 9236",
                "accession": "GCA_900112895.1",
                "taxid": 40841,
                "species_taxid": 40841,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 76.2311,
                "matched_fragments": 51,
                "total_fragments": 828,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCF_900291475.1",
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                "matched_fragments": 743,
                "total_fragments": 828,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Acidaminococcus",
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                "min_intra_species_ani": "99.31",
                "mean_intra_species_af": "0.92",
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                "num_clustered_genomes": 6,
                "status": "conclusive"
            },
            {
                "accession": "GCF_009696675.1",
                "gtdb_species": "s__Acidaminococcus sp000437815",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Acidaminococcus",
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                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCF_000025305.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Acidaminococcus",
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                "num_clustered_genomes": 11,
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            },
            {
                "accession": "GCA_900770265.1",
                "gtdb_species": "s__Acidaminococcus sp900770265",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Acidaminococcus",
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                "mean_intra_species_ani": "96.61",
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Acidaminococcales;f__Acidaminococcaceae;g__Acidaminococcus",
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            },
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            {
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
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                "num_clustered_genomes": 2,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.241,
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        "rRNA16S_genes": 4.5,
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        "mesophilic_range_tmp": 1.0,
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        "bacillus_cell_shape": 0.0,
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        "coccobacillus_cell_shape": 0.0,
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    },
    "_genome_taxon": [
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        "hominis"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}