{ "tc_result": [ { "organism_name": "Agromyces cavernae", "strain": "strain=SYSU K20354", "accession": "GCA_021044935.1", "taxid": 2898659, "species_taxid": 2898659, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1354, "total_fragments": 1354, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Agromyces humatus", "strain": "strain=JCM 14319", "accession": "GCA_021228295.1", "taxid": 279573, "species_taxid": 279573, "relation_to_type": "type", "validated": true, "ani": 90.3368, "matched_fragments": 1036, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces lapidis", "strain": "strain=JCM 14321", "accession": "GCA_009749405.1", "taxid": 279574, "species_taxid": 279574, "relation_to_type": "type", "validated": true, "ani": 84.0919, "matched_fragments": 860, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces badenianii", "strain": "strain=MF30-A", "accession": "GCA_003070885.1", "taxid": 2080742, "species_taxid": 2080742, "relation_to_type": "type", "validated": true, "ani": 83.6699, "matched_fragments": 748, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces hippuratus", "strain": "strain=DSM 8598", "accession": "GCA_013410355.1", "taxid": 286438, "species_taxid": 286438, "relation_to_type": "type", "validated": true, "ani": 83.6397, "matched_fragments": 852, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces fucosus", "strain": "strain=CCUG 35506", "accession": "GCA_004134865.1", "taxid": 41985, "species_taxid": 41985, "relation_to_type": "type", "validated": true, "ani": 83.5912, "matched_fragments": 845, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mariniharenae", "strain": "strain=NEAU-184", "accession": "GCA_008122505.1", "taxid": 2604423, "species_taxid": 2604423, "relation_to_type": "type", "validated": true, "ani": 83.59, "matched_fragments": 904, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces humi", "strain": "strain=ANK073", "accession": "GCA_009720255.2", "taxid": 1766800, "species_taxid": 1766800, "relation_to_type": "type", "validated": true, "ani": 83.5141, "matched_fragments": 580, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces italicus", "strain": "strain=JCM 14320", "accession": "GCA_009749375.1", "taxid": 279572, "species_taxid": 279572, "relation_to_type": "type", "validated": true, "ani": 83.332, "matched_fragments": 808, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces ramosus", "strain": "strain=DSM 43045", "accession": "GCA_004216665.1", "taxid": 33879, "species_taxid": 33879, "relation_to_type": "type", "validated": true, "ani": 83.3242, "matched_fragments": 866, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces italicus", "strain": "strain=DSM 16388", "accession": "GCA_000421545.1", "taxid": 279572, "species_taxid": 279572, "relation_to_type": "type", "validated": true, "ani": 83.3147, "matched_fragments": 815, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces allii", "strain": "strain=JCM 13584", "accession": "GCA_009749385.1", "taxid": 393607, "species_taxid": 393607, "relation_to_type": "type", "validated": true, "ani": 82.9841, "matched_fragments": 807, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces tardus", "strain": "strain=SJ-23", "accession": "GCA_003710805.1", "taxid": 2583849, "species_taxid": 2583849, "relation_to_type": "type", "validated": true, "ani": 82.8117, "matched_fragments": 814, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces bauzanensis", "strain": "strain=CGMCC 1.8984", "accession": "GCA_014645655.1", "taxid": 1308924, "species_taxid": 1308924, "relation_to_type": "type", "validated": true, "ani": 82.7735, "matched_fragments": 724, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces flavus", "strain": "strain=CPCC 202695", "accession": "GCA_004366335.2", "taxid": 589382, "species_taxid": 589382, "relation_to_type": "type", "validated": true, "ani": 82.1484, "matched_fragments": 770, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cryobacterium arcticum", "strain": "strain=SK-1", "accession": "GCA_003185895.1", "taxid": 670052, "species_taxid": 670052, "relation_to_type": "type", "validated": true, "ani": 78.4092, "matched_fragments": 418, "total_fragments": 1354, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_009749405.1", "gtdb_species": "s__Agromyces lapidis", "ani": 84.0403, "matched_fragments": 865, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016907835.1", "gtdb_species": "s__Agromyces cerinus_A", "ani": 83.7597, "matched_fragments": 853, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003070885.1", "gtdb_species": "s__Agromyces badenianii", "ani": 83.7034, "matched_fragments": 745, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.76", "min_intra_species_ani": "98.76", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013410355.1", "gtdb_species": "s__Agromyces hippuratus", "ani": 83.6728, "matched_fragments": 849, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900142065.1", "gtdb_species": "s__Agromyces cerinus", "ani": 83.6446, "matched_fragments": 879, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001429165.1", "gtdb_species": "s__Agromyces sp001429165", "ani": 83.6362, "matched_fragments": 834, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008122505.1", "gtdb_species": "s__Agromyces sp008122505", "ani": 83.6177, "matched_fragments": 901, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004134865.1", "gtdb_species": "s__Agromyces fucosus", "ani": 83.6024, "matched_fragments": 844, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.23", "min_intra_species_ani": "98.22", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_009720255.1", "gtdb_species": "s__Agromyces humi", "ani": 83.4943, "matched_fragments": 581, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004216665.1", "gtdb_species": "s__Agromyces ramosus", "ani": 83.3474, "matched_fragments": 864, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000421545.1", "gtdb_species": "s__Agromyces italicus", "ani": 83.3199, "matched_fragments": 814, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001428255.1", "gtdb_species": "s__Agromyces sp001428255", "ani": 83.1608, "matched_fragments": 862, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006715355.1", "gtdb_species": "s__Agromyces sp006715355", "ani": 83.0202, "matched_fragments": 845, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009749385.1", "gtdb_species": "s__Agromyces allii", "ani": 82.9737, "matched_fragments": 808, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009749465.1", "gtdb_species": "s__Agromyces terreus", "ani": 82.8743, "matched_fragments": 751, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004959775.1", "gtdb_species": "s__Agromyces sp004959775", "ani": 82.7969, "matched_fragments": 826, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003710805.1", "gtdb_species": "s__Agromyces tardus", "ani": 82.7755, "matched_fragments": 818, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014645655.1", "gtdb_species": "s__Agromyces bauzanensis", "ani": 82.7623, "matched_fragments": 725, "total_fragments": 1354, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }