{ "tc_result": [ { "organism_name": "Chromobacterium piscinae", "strain": "strain=DSM 23278", "accession": "GCA_021129175.1", "taxid": 686831, "species_taxid": 686831, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1571, "total_fragments": 1578, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Chromobacterium vaccinii", "strain": "strain=MWU205", "accession": "GCA_000971335.1", "taxid": 1108595, "species_taxid": 1108595, "relation_to_type": "type", "validated": true, "ani": 94.7019, "matched_fragments": 1302, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium violaceum", "strain": "strain=ATCC 12472", "accession": "GCA_000007705.1", "taxid": 536, "species_taxid": 536, "relation_to_type": "type", "validated": true, "ani": 91.0257, "matched_fragments": 1267, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium violaceum", "strain": "strain=NCTC9757", "accession": "GCA_900446805.1", "taxid": 536, "species_taxid": 536, "relation_to_type": "type", "validated": true, "ani": 90.9609, "matched_fragments": 1283, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium phragmitis", "strain": "strain=IIBBL 112-1", "accession": "GCA_003325475.1", "taxid": 2202141, "species_taxid": 2202141, "relation_to_type": "type", "validated": true, "ani": 89.0415, "matched_fragments": 1215, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium subtsugae", "strain": "strain=PRAA4-1", "accession": "GCA_001676875.1", "taxid": 251747, "species_taxid": 251747, "relation_to_type": "type", "validated": true, "ani": 87.5147, "matched_fragments": 1127, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium alticapitis", "strain": "strain=MWU14-2602", "accession": "GCA_002924365.1", "taxid": 2073169, "species_taxid": 2073169, "relation_to_type": "type", "validated": true, "ani": 86.4392, "matched_fragments": 1044, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium sinusclupearum", "strain": "strain=MWU13-2610", "accession": "GCA_002902845.1", "taxid": 2077146, "species_taxid": 2077146, "relation_to_type": "type", "validated": true, "ani": 86.328, "matched_fragments": 1028, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium sphagni", "strain": "strain=IIBBL 14B-1", "accession": "GCA_001855555.1", "taxid": 1903179, "species_taxid": 1903179, "relation_to_type": "type", "validated": true, "ani": 86.0462, "matched_fragments": 1037, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chromobacterium aquaticum", "strain": "strain=DSM 19852", "accession": "GCA_021129195.1", "taxid": 467180, "species_taxid": 467180, "relation_to_type": "type", "validated": true, "ani": 83.3479, "matched_fragments": 886, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ralstonia pseudosolanacearum", "strain": "strain=LMG 9673", "accession": "GCA_919586305.1", "taxid": 1310165, "species_taxid": 1310165, "relation_to_type": "type", "validated": true, "ani": 77.4221, "matched_fragments": 311, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinilyticum aquatile", "strain": "strain=DSM 21506", "accession": "GCA_000430805.1", "taxid": 362520, "species_taxid": 362520, "relation_to_type": "type", "validated": true, "ani": 77.1775, "matched_fragments": 243, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella brevitalea", "strain": "strain=DSM 7029", "accession": "GCA_001017435.1", "taxid": 413882, "species_taxid": 413882, "relation_to_type": "type", "validated": true, "ani": 76.6885, "matched_fragments": 257, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenibaculum pallidiluteum", "strain": "strain=SYSU D00532", "accession": "GCA_017355985.1", "taxid": 2812559, "species_taxid": 2812559, "relation_to_type": "type", "validated": true, "ani": 75.2888, "matched_fragments": 126, "total_fragments": 1578, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 98.96, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_011601295.1", "gtdb_species": "s__Chromobacterium vaccinii_A", "ani": 98.8232, "matched_fragments": 1451, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.84", "min_intra_species_ani": "95.77", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCF_000971335.1", "gtdb_species": "s__Chromobacterium vaccinii", "ani": 94.7175, "matched_fragments": 1301, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.63", "min_intra_species_ani": "98.56", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_000007705.1", "gtdb_species": "s__Chromobacterium violaceum", "ani": 91.0353, "matched_fragments": 1266, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.58", "min_intra_species_ani": "98.16", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 26, "status": "-" }, { "accession": "GCF_003325475.1", "gtdb_species": "s__Chromobacterium phragmitis", "ani": 89.0316, "matched_fragments": 1216, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.00", "min_intra_species_ani": "99.00", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002848345.1", "gtdb_species": "s__Chromobacterium sp002848345", "ani": 87.7267, "matched_fragments": 1168, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001676875.1", "gtdb_species": "s__Chromobacterium subtsugae", "ani": 87.5085, "matched_fragments": 1128, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.12", "min_intra_species_ani": "98.52", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_001855565.1", "gtdb_species": "s__Chromobacterium amazonense", "ani": 86.4854, "matched_fragments": 1006, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.81", "min_intra_species_ani": "97.67", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_008275125.1", "gtdb_species": "s__Chromobacterium paludis", "ani": 86.4758, "matched_fragments": 1019, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002924365.1", "gtdb_species": "s__Chromobacterium sp002924365", "ani": 86.4556, "matched_fragments": 1042, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016428945.1", "gtdb_species": "s__Chromobacterium sp016428945", "ani": 86.262, "matched_fragments": 1017, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Chromobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.99", "min_intra_species_ani": "97.99", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900177275.1", "gtdb_species": "s__Pseudogulbenkiania subflava", "ani": 80.8683, "matched_fragments": 620, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Pseudogulbenkiania", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000428465.1", "gtdb_species": "s__Chitinimonas koreensis", "ani": 78.1604, "matched_fragments": 538, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chitinimonadaceae;g__Chitinimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013363835.1", "gtdb_species": "s__Azonexus sp013363835", "ani": 76.7917, "matched_fragments": 170, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azonexus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016278265.1", "gtdb_species": "s__Guyparkeria sp016278265", "ani": 75.8077, "matched_fragments": 83, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Halothiobacillales;f__Halothiobacillaceae;g__Guyparkeria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001648175.1", "gtdb_species": "s__Halotalea alkalilenta_A", "ani": 75.5957, "matched_fragments": 101, "total_fragments": 1578, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halotalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }