{ "type": "genome", "identifier": "GCF_021147775.1", "organism": "Pseudomonas californiensis", "title": "Pseudomonas californiensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Florida", "publication": [ {} ], "properties": { "assembly_accession": "GCF_021147775.1", "bioproject": "PRJNA224116", "biosample": "SAMN18822676", "wgs_master": "JAGTPK000000000.1", "refseq_category": "reference genome", "taxid": "2829823", "species_taxid": "2829823", "organism_name": "Pseudomonas californiensis", "infraspecific_name": "strain=CDFA601", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/12/09", "asm_name": "ASM2114777v1", "asm_submitter": "University of Florida", "gbrs_paired_asm": "GCA_021147775.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/021/147/775/GCF_021147775.1_ASM2114777v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6291404", "genome_size_ungapped": "6291404", "gc_percent": "58.000000", "replicon_count": "0", "scaffold_count": "147", "contig_count": "147", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_021147775.1-RS_2024_11_26", "annotation_date": "2024-11-26", "total_gene_count": "5906", "protein_coding_gene_count": "5624", "non_coding_gene_count": "65", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-12-09", "dateModified": "2021-12-09", "datePublished": "2021-12-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas californiensis" ], "sample_taxid": [ "2829823" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Pseudomonas syringae group genomosp. 3", "strain": "strain=ICMP529", "accession": "GCA_001400335.1", "taxid": 251701, "species_taxid": 251701, "relation_to_type": "pathovar", "validated": true, "ani": 83.7418, "matched_fragments": 1233, "total_fragments": 2031, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas syringae", "strain": "strain=ICMP 9617", "accession": "GCA_000658965.1", "taxid": 317, "species_taxid": 317, "relation_to_type": "pathovar", "validated": true, "ani": 83.6349, "matched_fragments": 1313, "total_fragments": 2031, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas syringae group genomosp. 3", "strain": "strain=DC3000", "accession": "GCA_000007805.1", "taxid": 251701, "species_taxid": 251701, "relation_to_type": "type", "validated": true, "ani": 83.621, "matched_fragments": 1333, "total_fragments": 2031, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas amygdali", "strain": "strain=DSM 105780", "accession": "GCA_022828345.1", "taxid": 47877, "species_taxid": 47877, "relation_to_type": "pathovar", "validated": true, "ani": 83.6109, "matched_fragments": 1294, "total_fragments": 2031, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas syringae group genomosp. 3", "strain": "strain=ICMP4303", "accession": "GCA_001401395.1", "taxid": 251701, "species_taxid": 251701, "relation_to_type": "pathovar", "validated": true, "ani": 83.5556, "matched_fragments": 1273, "total_fragments": 2031, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas ficuserectae", "strain": "strain=ICMP7848", "accession": "GCA_001400815.1", "taxid": 53410, "species_taxid": 53410, "relation_to_type": "type", "validated": true, "ani": 83.3342, "matched_fragments": 1116, "total_fragments": 2031, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas 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