{ "type": "genome", "identifier": "GCF_021165935.1", "organism": "Microbulbifer elongatus", "title": "Microbulbifer elongatus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Zhejiang Ocean University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_021165935.1", "bioproject": "PRJNA224116", "biosample": "SAMN23563212", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "86173", "species_taxid": "86173", "organism_name": "Microbulbifer elongatus", "infraspecific_name": "strain=DSM 6810", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/12/12", "asm_name": "ASM2116593v1", "asm_submitter": "Zhejiang Ocean University", "gbrs_paired_asm": "GCA_021165935.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/021/165/935/GCF_021165935.1_ASM2116593v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4196952", "genome_size_ungapped": "4196952", "gc_percent": "57.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_021165935.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "3468", "protein_coding_gene_count": "3389", "non_coding_gene_count": "64", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-12-12", "dateModified": "2021-12-12", "datePublished": "2021-12-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Microbulbifer elongatus" ], "sample_taxid": [ "86173" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "1.185 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4196952", "Number of Sequences": "1", "Longest Sequences (bp)": "4196952", "N50 (bp)": "4196952", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "57.6", "Number of CDSs": "3481", "Average Protein Length": "352.6", "Coding Ratio (%)": "87.7", "Number of rRNAs": "12", "Number of tRNAs": "48", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Microbulbifer elongatus", "strain": "strain=DSM 6810", "accession": "GCA_021165935.1", "taxid": 86173, "species_taxid": 86173, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1398, "total_fragments": 1398, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbulbifer elongatus", "strain": "strain=DSM 6810", "accession": "GCA_022554105.1", "taxid": 86173, "species_taxid": 86173, "relation_to_type": "type", "validated": true, "ani": 99.9534, "matched_fragments": 1355, "total_fragments": 1398, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbulbifer hydrolyticus", "strain": "strain=IRE-31", "accession": "GCA_009931115.1", "taxid": 48074, "species_taxid": 48074, "relation_to_type": "type", "validated": true, "ani": 81.6685, "matched_fragments": 762, "total_fragments": 1398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbulbifer hydrolyticus", "strain": "strain=DSM 11525", "accession": "GCA_014202835.1", "taxid": 48074, "species_taxid": 48074, "relation_to_type": "type", "validated": true, "ani": 81.5957, "matched_fragments": 753, "total_fragments": 1398, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbulbifer 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