[2024-01-24 13:19:10,156] [INFO] DFAST_QC pipeline started.
[2024-01-24 13:19:10,158] [INFO] DFAST_QC version: 0.5.7
[2024-01-24 13:19:10,158] [INFO] DQC Reference Directory: /var/lib/cwl/stg9b66ceb5-ca22-4d82-8b87-f84af73180f5/dqc_reference
[2024-01-24 13:19:11,433] [INFO] ===== Start taxonomy check using ANI =====
[2024-01-24 13:19:11,433] [INFO] Task started: Prodigal
[2024-01-24 13:19:11,434] [INFO] Running command: gunzip -c /var/lib/cwl/stg3d555421-973b-45ae-ab01-a7f58b3f775c/GCF_021390075.1_ASM2139007v1_genomic.fna.gz | prodigal -d GCF_021390075.1_ASM2139007v1_genomic.fna/cds.fna -a GCF_021390075.1_ASM2139007v1_genomic.fna/protein.faa -g 11 -q > /dev/null
[2024-01-24 13:19:21,946] [INFO] Task succeeded: Prodigal
[2024-01-24 13:19:21,946] [INFO] Task started: HMMsearch
[2024-01-24 13:19:21,946] [INFO] Running command: hmmsearch --tblout GCF_021390075.1_ASM2139007v1_genomic.fna/hmmer_result.tsv -E 1E-50 /var/lib/cwl/stg9b66ceb5-ca22-4d82-8b87-f84af73180f5/dqc_reference/reference_markers.hmm GCF_021390075.1_ASM2139007v1_genomic.fna/protein.faa > /dev/null
[2024-01-24 13:19:22,260] [INFO] Task succeeded: HMMsearch
[2024-01-24 13:19:22,262] [INFO] Found 6/6 markers.
[2024-01-24 13:19:22,301] [INFO] Query marker FASTA was written to GCF_021390075.1_ASM2139007v1_genomic.fna/markers.fasta
[2024-01-24 13:19:22,301] [INFO] Task started: Blastn
[2024-01-24 13:19:22,301] [INFO] Running command: blastn -query GCF_021390075.1_ASM2139007v1_genomic.fna/markers.fasta -db /var/lib/cwl/stg9b66ceb5-ca22-4d82-8b87-f84af73180f5/dqc_reference/reference_markers.fasta -out GCF_021390075.1_ASM2139007v1_genomic.fna/blast.markers.tsv -outfmt 6 -max_hsps 1 -num_alignments 5
[2024-01-24 13:19:22,957] [INFO] Task succeeded: Blastn
[2024-01-24 13:19:22,960] [INFO] Selected 47 target genomes.
[2024-01-24 13:19:22,960] [INFO] Target genome list was writen to GCF_021390075.1_ASM2139007v1_genomic.fna/target_genomes.txt
[2024-01-24 13:19:23,001] [INFO] Task started: fastANI
[2024-01-24 13:19:23,001] [INFO] Running command: fastANI --query /var/lib/cwl/stg3d555421-973b-45ae-ab01-a7f58b3f775c/GCF_021390075.1_ASM2139007v1_genomic.fna.gz --refList GCF_021390075.1_ASM2139007v1_genomic.fna/target_genomes.txt --output GCF_021390075.1_ASM2139007v1_genomic.fna/fastani_result.tsv --threads 1
[2024-01-24 13:19:56,840] [INFO] Task succeeded: fastANI
[2024-01-24 13:19:56,840] [INFO] Loading species specific ANI threshold from /var/lib/cwl/stg9b66ceb5-ca22-4d82-8b87-f84af73180f5/dqc_reference/prokaryote_ANI_species_specific_threshold.txt
[2024-01-24 13:19:56,841] [WARNING] Species-specific ANI threshold file not found. Will use the default threshold for all species. [/var/lib/cwl/stg9b66ceb5-ca22-4d82-8b87-f84af73180f5/dqc_reference/prokaryote_ANI_species_specific_threshold.txt]
[2024-01-24 13:19:56,864] [INFO] Found 35 fastANI hits (0 hits with ANI > threshold)
[2024-01-24 13:19:56,865] [INFO] The taxonomy check result is classified as 'below_threshold'.
[2024-01-24 13:19:56,865] [INFO] DFAST Taxonomy check final result
--------------------------------------------------------------------------------
organism_name	strain	accession	taxid	species_taxid	relation_to_type	validated	ani	matched_fragments	total_fragments	ani_threshold	status
Paenisporosarcina cavernae	strain=K2R23-3	GCA_003595195.1	2320858	2320858	type	True	80.277	61	1595	95	below_threshold
Metabacillus dongyingensis	strain=BY2G20	GCA_019933155.2	2874282	2874282	type	True	79.5544	91	1595	95	below_threshold
Salipaludibacillus neizhouensis	strain=DSM 19794	GCA_002886185.1	885475	885475	type	True	79.1956	59	1595	95	below_threshold
Bacillus niameyensis	strain=SIT3	GCA_001375535.1	1522308	1522308	type	True	78.9874	73	1595	95	below_threshold
Lederbergia lenta	strain=NCTC4824	GCA_900478165.1	1467	1467	type	True	78.9108	87	1595	95	below_threshold
Neobacillus mesonae	strain=FJAT-13985	GCA_001636315.1	1193713	1193713	type	True	78.9058	133	1595	95	below_threshold
Bacillus weihaiensis	strain=Alg07	GCA_001889165.1	1547283	1547283	type	True	78.8448	125	1595	95	below_threshold
Metabacillus endolithicus	strain=KCTC 33579	GCA_023078335.1	1535204	1535204	type	True	78.8241	136	1595	95	below_threshold
Bacillus dafuensis	strain=FJAT-25496	GCA_007995155.1	1742359	1742359	type	True	78.7434	205	1595	95	below_threshold
Cytobacillus solani	strain=FJAT-18043	GCA_001420595.1	1637975	1637975	type	True	78.7322	220	1595	95	below_threshold
Rossellomorea arthrocnemi	strain=EAR8	GCA_904424705.1	2769542	2769542	type	True	78.6773	186	1595	95	below_threshold
Rossellomorea vietnamensis	strain=NBRC 101237	GCA_001591825.1	218284	218284	suspected-type	True	78.3621	164	1595	95	below_threshold
Bacillus massilionigeriensis	strain=Marseille-P2384	GCA_900117315.1	1805475	1805475	type	True	78.3327	158	1595	95	below_threshold
Sutcliffiella halmapala	strain=DSM 8723	GCA_002019665.1	79882	79882	type	True	78.1496	119	1595	95	below_threshold
Rossellomorea aquimaris	strain=TF12	GCA_001648555.1	189382	189382	suspected-type	True	78.0139	162	1595	95	below_threshold
Cytobacillus horneckiae	strain=1P01SC	GCA_002835735.1	549687	549687	type	True	77.9929	158	1595	95	below_threshold
Heyndrickxia oleronia	strain=DSM 9356	GCA_025263665.1	38875	38875	type	True	77.9217	142	1595	95	below_threshold
Cytobacillus depressus	strain=BZ1	GCA_008923245.1	1602942	1602942	type	True	77.7678	167	1595	95	below_threshold
Bacillus enclensis	strain=SGD-1123	GCA_001456935.1	1402860	1402860	type	True	77.6146	123	1595	95	below_threshold
Bacillus enclensis	strain=SGD-1123	GCA_900094975.1	1402860	1402860	type	True	77.6066	124	1595	95	below_threshold
Priestia megaterium	strain=ATCC 14581	GCA_900113355.1	1404	1404	suspected-type	True	77.5493	84	1595	95	below_threshold
Neobacillus jeddahensis	strain=JCE	GCA_000612625.1	1461580	1461580	type	True	77.3327	146	1595	95	below_threshold
Priestia megaterium	strain=NBRC 15308	GCA_001591525.1	1404	1404	type	True	77.3314	84	1595	95	below_threshold
Priestia aryabhattai	strain=B8W22	GCA_000956595.1	412384	412384	type	True	77.2485	88	1595	95	below_threshold
Cytobacillus praedii	strain=FJAT-25547	GCA_001439605.1	1742358	1742358	type	True	77.2096	215	1595	95	below_threshold
Heyndrickxia sporothermodurans	strain=DSM 10599	GCA_016785185.1	46224	46224	type	True	77.1778	122	1595	95	below_threshold
Heyndrickxia sporothermodurans	strain=DSM 10599	GCA_003055085.1	46224	46224	type	True	77.1293	111	1595	95	below_threshold
Margalitia camelliae	strain=7578-1	GCA_002844575.1	1707093	1707093	type	True	77.1279	91	1595	95	below_threshold
Jeotgalibacillus aurantiacus	strain=T12	GCA_020595125.1	2763266	2763266	type	True	77.1159	52	1595	95	below_threshold
Neobacillus citreus	strain=FJAT-50051	GCA_018343545.2	2833578	2833578	type	True	76.8808	123	1595	95	below_threshold
Bacillus suaedaesalsae	strain=RD4P76	GCA_016890225.1	2810349	2810349	type	True	76.8723	113	1595	95	below_threshold
Bacillus solimangrovi	strain=GH2-4	GCA_001742425.1	1305675	1305675	type	True	76.7005	83	1595	95	below_threshold
Gottfriedia solisilvae	strain=CGMCC 1.14993	GCA_014640495.1	1516104	1516104	type	True	76.5037	84	1595	95	below_threshold
Gottfriedia solisilvae	strain=NEAU-cbsb5	GCA_002128405.1	1516104	1516104	type	True	76.4773	83	1595	95	below_threshold
Lederbergia galactosidilytica	strain=DSM 15595	GCA_017873565.1	217031	217031	type	True	76.4236	62	1595	95	below_threshold
--------------------------------------------------------------------------------
[2024-01-24 13:19:56,869] [INFO] DFAST Taxonomy check result was written to GCF_021390075.1_ASM2139007v1_genomic.fna/tc_result.tsv
[2024-01-24 13:19:56,870] [INFO] ===== Taxonomy check completed =====
[2024-01-24 13:19:56,870] [INFO] ===== Start completeness check using CheckM =====
[2024-01-24 13:19:56,870] [INFO] Setting CHECKM_DATA_PATH to /var/lib/cwl/stg9b66ceb5-ca22-4d82-8b87-f84af73180f5/dqc_reference/checkm_data
[2024-01-24 13:19:56,872] [INFO] Selected 'Prokaryote' markers (life, taxid=0) for CheckM
[2024-01-24 13:19:56,919] [INFO] Task started: CheckM
[2024-01-24 13:19:56,919] [INFO] Running command: checkm taxonomy_wf --tab_table -f GCF_021390075.1_ASM2139007v1_genomic.fna/cc_result.tsv -t 1 life "Prokaryote" GCF_021390075.1_ASM2139007v1_genomic.fna/checkm_input GCF_021390075.1_ASM2139007v1_genomic.fna/checkm_result
[2024-01-24 13:20:30,614] [INFO] Task succeeded: CheckM
[2024-01-24 13:20:30,616] [INFO] Completeness check finished.
--------------------------------------------------------------------------------
Completeness: 100.00%
Contamintation: 4.17%
Strain heterogeneity: 0.00%
--------------------------------------------------------------------------------
[2024-01-24 13:20:30,640] [INFO] ===== Completeness check finished =====
[2024-01-24 13:20:30,640] [INFO] ===== Start GTDB Search =====
[2024-01-24 13:20:30,641] [INFO] Query marker FASTA already exists. Will reuse it. (GCF_021390075.1_ASM2139007v1_genomic.fna/markers.fasta)
[2024-01-24 13:20:30,641] [INFO] Task started: Blastn
[2024-01-24 13:20:30,641] [INFO] Running command: blastn -query GCF_021390075.1_ASM2139007v1_genomic.fna/markers.fasta -db /var/lib/cwl/stg9b66ceb5-ca22-4d82-8b87-f84af73180f5/dqc_reference/reference_markers_gtdb.fasta -out GCF_021390075.1_ASM2139007v1_genomic.fna/blast.markers.gtdb.tsv -outfmt 6 -max_hsps 1 -num_alignments 5
[2024-01-24 13:20:31,496] [INFO] Task succeeded: Blastn
[2024-01-24 13:20:31,500] [INFO] Selected 49 target genomes.
[2024-01-24 13:20:31,501] [INFO] Target genome list was writen to GCF_021390075.1_ASM2139007v1_genomic.fna/target_genomes_gtdb.txt
[2024-01-24 13:20:31,541] [INFO] Task started: fastANI
[2024-01-24 13:20:31,542] [INFO] Running command: fastANI --query /var/lib/cwl/stg3d555421-973b-45ae-ab01-a7f58b3f775c/GCF_021390075.1_ASM2139007v1_genomic.fna.gz --refList GCF_021390075.1_ASM2139007v1_genomic.fna/target_genomes_gtdb.txt --output GCF_021390075.1_ASM2139007v1_genomic.fna/fastani_result_gtdb.tsv --threads 1
[2024-01-24 13:21:15,173] [INFO] Task succeeded: fastANI
[2024-01-24 13:21:15,207] [INFO] Found 47 fastANI hits (0 hits with ANI > circumscription radius)
[2024-01-24 13:21:15,207] [INFO] GTDB search result
--------------------------------------------------------------------------------
accession	gtdb_species	ani	matched_fragments	total_fragments	gtdb_taxonomy	ani_circumscription_radius	mean_intra_species_ani	min_intra_species_ani	mean_intra_species_af	min_intra_species_af	num_clustered_genomes	status
GCF_012911895.1	s__Rossellomorea sp012911895	93.1829	289	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	N/A	N/A	N/A	N/A	1	-
GCF_003315075.1	s__Rossellomorea aquimaris_C	79.5927	224	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	N/A	N/A	N/A	N/A	1	-
GCF_008180865.1	s__Rossellomorea aquimaris_D	79.3899	226	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	97.97	97.96	0.89	0.89	3	-
GCF_003667865.1	s__Bacillus_BQ marisflavi_A	79.353	130	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Bacillus_BQ	95.0	N/A	N/A	N/A	N/A	1	-
GCF_008364765.1	s__Rossellomorea sp008364765	79.3208	242	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	N/A	N/A	N/A	N/A	1	-
GCF_000935355.1	s__Rossellomorea aquimaris_B	79.2303	229	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	N/A	N/A	N/A	N/A	1	-
GCF_011398925.1	s__Rossellomorea sp011398925	78.8768	164	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001274725.1	s__Cytobacillus globisporus	78.8226	198	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_007995155.1	s__Cytobacillus dafuensis	78.7771	201	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	99.98	99.98	1.00	1.00	2	-
GCF_001420595.1	s__Cytobacillus solani	78.7678	218	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	99.54	99.49	0.95	0.94	3	-
GCF_002886185.1	s__Salipaludibacillus neizhouensis	78.7552	56	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_H;f__Salisediminibacteriaceae;g__Salipaludibacillus	95.0	99.99	99.99	1.00	1.00	2	-
GCF_904424705.1	s__Rossellomorea sp904424705	78.7187	184	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	N/A	N/A	N/A	N/A	1	-
GCF_900166665.1	s__Cytobacillus gottheilii_A	78.7058	188	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_018343615.1	s__Margalitia sp018343615	78.6359	98	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__Margalitia	95.0	N/A	N/A	N/A	N/A	1	-
GCF_005938125.1	s__Rossellomorea sp005938125	78.5853	195	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	N/A	N/A	N/A	N/A	1	-
GCF_002561455.1	s__Rossellomorea sp002561455	78.4587	191	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	N/A	N/A	N/A	N/A	1	-
GCF_016756695.1	s__Heyndrickxia sporothermodurans	78.3335	133	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__Heyndrickxia	95.0	99.73	97.95	0.95	0.84	38	-
GCF_002835735.1	s__Cytobacillus horneckiae	78.0196	158	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	98.87	98.22	0.90	0.90	3	-
GCF_001509555.1	s__Cytobacillus sp001509555	77.9845	183	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_000518885.1	s__Cytobacillus sp000518885	77.8999	181	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001956215.1	s__Cytobacillus sp001956215	77.8917	179	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_004366035.1	s__Cytobacillus oceanisediminis_C	77.8411	195	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	100.00	100.00	0.99	0.99	2	-
GCF_003182355.1	s__Cytobacillus oceanisediminis_A	77.7961	200	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_008923245.1	s__Cytobacillus depressus	77.7906	165	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_018343665.1	s__Cytobacillus sp018343665	77.7048	192	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_002860255.1	s__Neobacillus cucumis_A	77.6291	138	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_000299035.1	s__Bacillus_A bingmayongensis	77.6167	89	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Bacillus_A	95.0	97.40	97.40	0.86	0.86	2	-
GCF_001456935.1	s__Rossellomorea enclensis	77.6042	121	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_B;g__Rossellomorea	95.0	98.25	97.66	0.91	0.88	7	-
GCF_006546985.1	s__VATK01 sp006546985	77.4557	139	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__VATK01	95.0	N/A	N/A	N/A	N/A	1	-
GCF_902829255.1	s__Metabacillus niabensis	77.428	102	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Metabacillus	95.0	98.58	98.41	0.91	0.90	3	-
GCF_014773385.1	s__IB182487 sp014773385	77.399	99	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__IB182487	95.0	N/A	N/A	N/A	N/A	1	-
GCF_004358205.1	s__Neobacillus salipaludis	77.3963	148	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_002860125.1	s__Bacillus_BJ canaveralius	77.3644	123	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Bacillus_BJ	95.0	99.48	99.12	0.94	0.92	4	-
GCA_019219025.1	s__Neobacillus sp019219025	77.3635	155	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_007678255.1	s__Neobacillus sp007678255	77.3095	141	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_000612625.1	s__Neobacillus jeddahensis	77.3068	144	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus	95.0	99.99	99.99	0.99	0.99	3	-
GCF_016107705.1	s__Neobacillus cucumis_B	77.2478	133	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_011393025.1	s__URHB0009 sp011393025	77.2476	127	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__URHB0009	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001439605.1	s__Cytobacillus praedii	77.2081	213	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Cytobacillus	95.0	99.20	99.20	0.93	0.93	2	-
GCF_000482325.1	s__Neobacillus sp000482325	77.1411	143	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus	95.0	N/A	N/A	N/A	N/A	1	-
GCF_002844575.1	s__Margalitia camelliae	77.1279	91	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__Bacillaceae_C;g__Margalitia	95.0	99.53	99.53	0.93	0.93	2	-
GCF_002559145.1	s__Neobacillus sp002559145	77.1226	143	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_B;f__DSM-18226;g__Neobacillus	95.0	95.43	95.43	0.81	0.81	2	-
GCF_002561295.1	s__Bacillus_A cereus_S	76.9802	88	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Bacillus_A	95.0	99.16	96.34	0.94	0.87	9	-
GCF_014837155.1	s__Litchfieldia sp014837155	76.92	143	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_L;g__Litchfieldia	95.0	N/A	N/A	N/A	N/A	1	-
GCF_004138285.1	s__Gottfriedia acidiceleris_A	76.8504	74	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Gottfriedia	95.0	N/A	N/A	N/A	N/A	1	-
GCF_001742425.1	s__Bacillus_AV solimangrovi	76.6851	82	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_D;f__Bacillaceae_N;g__Bacillus_AV	95.0	N/A	N/A	N/A	N/A	1	-
GCF_002128405.1	s__Gottfriedia solisilvae	76.4773	83	1595	d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Gottfriedia	95.0	98.14	96.28	0.93	0.87	3	-
--------------------------------------------------------------------------------
[2024-01-24 13:21:15,209] [INFO] GTDB search result was written to GCF_021390075.1_ASM2139007v1_genomic.fna/result_gtdb.tsv
[2024-01-24 13:21:15,210] [INFO] ===== GTDB Search completed =====
[2024-01-24 13:21:15,219] [INFO] DFAST_QC result json was written to GCF_021390075.1_ASM2139007v1_genomic.fna/dqc_result.json
[2024-01-24 13:21:15,219] [INFO] DFAST_QC completed!
[2024-01-24 13:21:15,219] [INFO] Total running time: 0h2m5s