{ "type": "genome", "identifier": "GCF_021391395.1", "organism": "Sphingomonas cannabina", "title": "Sphingomonas cannabina", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Korea Research Institute of Bioscience and Biotechnology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_021391395.1", "bioproject": "PRJNA224116", "biosample": "SAMN24269798", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2899123", "species_taxid": "2899123", "organism_name": "Sphingomonas cannabina", "infraspecific_name": "strain=DM2-R-LB4", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/01/09", "asm_name": "ASM2139139v1", "asm_submitter": "Korea Research Institute of Bioscience and Biotechnology", "gbrs_paired_asm": "GCA_021391395.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/021/391/395/GCF_021391395.1_ASM2139139v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4386171", "genome_size_ungapped": "4386171", "gc_percent": "68.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_021391395.1-RS_2024_11_26", "annotation_date": "2024-11-26", "total_gene_count": "4123", "protein_coding_gene_count": "4035", "non_coding_gene_count": "51", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-01-09", "dateModified": "2022-01-09", "datePublished": "2022-01-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Sphingomonas cannabina" ], "sample_taxid": [ "2899123" ], "sample_host_organism": [], 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1462, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas azotifigens", "strain": "strain=NBRC 15497", "accession": "GCA_002091475.1", "taxid": 330920, "species_taxid": 330920, "relation_to_type": "type", "validated": true, "ani": 80.5272, "matched_fragments": 664, "total_fragments": 1462, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas taxi", "strain": "strain=ATCC 55669", "accession": "GCA_000764535.1", "taxid": 1549858, "species_taxid": 1549858, "relation_to_type": "type", "validated": true, "ani": 80.5101, "matched_fragments": 664, "total_fragments": 1462, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas guangdongensis", "strain": "strain=CGMCC 1.12672", "accession": "GCA_900199185.1", "taxid": 1141890, "species_taxid": 1141890, "relation_to_type": "type", "validated": true, "ani": 80.4752, "matched_fragments": 626, "total_fragments": 1462, "ani_threshold": 95, "status": 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"strain": "strain=CGMCC 1.15330", "accession": "GCA_014641735.1", "taxid": 1779358, "species_taxid": 1779358, "relation_to_type": "type", "validated": true, "ani": 80.0507, "matched_fragments": 590, "total_fragments": 1462, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas psychrotolerans", "strain": "strain=Cra20", "accession": "GCA_002796605.1", "taxid": 1327635, "species_taxid": 1327635, "relation_to_type": "type", "validated": true, "ani": 79.9517, "matched_fragments": 736, "total_fragments": 1462, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas corticis", "strain": "strain=36D10-4-7", "accession": "GCA_012035195.1", "taxid": 2722791, "species_taxid": 2722791, "relation_to_type": "type", "validated": true, "ani": 79.8959, "matched_fragments": 605, "total_fragments": 1462, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aquatilis", "strain": "strain=DSM 15581", "accession": "GCA_014196115.1", "taxid": 93063, "species_taxid": 93063, "relation_to_type": "type", "validated": true, "ani": 79.8829, "matched_fragments": 584, "total_fragments": 1462, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aracearum", "strain": "strain=WZY 27", "accession": "GCA_003345355.1", "taxid": 2283317, "species_taxid": 2283317, "relation_to_type": "type", "validated": true, "ani": 79.8298, "matched_fragments": 563, "total_fragments": 1462, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas pruni", "strain": "strain=NBRC 15498", "accession": "GCA_001598455.1", "taxid": 40683, "species_taxid": 40683, "relation_to_type": "type", "validated": true, "ani": 79.7474, "matched_fragments": 612, "total_fragments": 1462, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas citricola", "strain": "strain=RHCKR47", "accession": "GCA_019429535.1", "taxid": 2862498, "species_taxid": 2862498, 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