{ "type": "genome", "identifier": "GCF_021502675.1", "organism": "Yinghuangia soli", "title": "Yinghuangia soli", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Jiangsu Normal University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_021502675.1", "bioproject": "PRJNA224116", "biosample": "SAMN24662247", "wgs_master": "JAKFHA000000000.1", "refseq_category": "reference genome", "taxid": "2908204", "species_taxid": "2908204", "organism_name": "Yinghuangia soli", "infraspecific_name": "strain=KLBMP 8922", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2022/01/18", "asm_name": "ASM2150267v1", "asm_submitter": "Jiangsu Normal University", "gbrs_paired_asm": "GCA_021502675.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/021/502/675/GCF_021502675.1_ASM2150267v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9708286", "genome_size_ungapped": "9707416", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "92", "contig_count": "92", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_021502675.1-RS_2024_08_29", "annotation_date": "2024-08-29", "total_gene_count": "8729", "protein_coding_gene_count": "8539", "non_coding_gene_count": "66", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2022-01-18", "dateModified": "2022-01-18", "datePublished": "2022-01-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Yinghuangia soli" ], "sample_taxid": [ "2908204" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Guizhou" ], 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"strain=PRKS01-65", "accession": "GCA_011008945.1", "taxid": 2697029, "species_taxid": 2697029, "relation_to_type": "type", "validated": true, "ani": 77.9608, "matched_fragments": 856, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora griseola", "strain": "strain=JCM 3339", "accession": "GCA_014648555.1", "taxid": 2064, "species_taxid": 2064, "relation_to_type": "type", "validated": true, "ani": 77.911, "matched_fragments": 1023, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces rubellomurinus", "strain": "strain=ATCC 31215", "accession": "GCA_000961885.1", "taxid": 359131, "species_taxid": 359131, "relation_to_type": "type", "validated": true, "ani": 77.8875, "matched_fragments": 1089, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora purpeofusca", "strain": "strain=NRRL B-1817", "accession": "GCA_000718025.1", "taxid": 67352, "species_taxid": 67352, "relation_to_type": "type", "validated": true, "ani": 77.855, "matched_fragments": 1107, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces xinghaiensis", "strain": "strain=S187", "accession": "GCA_000220705.2", "taxid": 1038928, "species_taxid": 1038928, "relation_to_type": "type", "validated": true, "ani": 77.8248, "matched_fragments": 831, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces caatingaensis", "strain": "strain=CMAA 1322", "accession": "GCA_001187435.1", "taxid": 1678637, "species_taxid": 1678637, "relation_to_type": "type", "validated": true, "ani": 77.823, "matched_fragments": 884, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Peterkaempfera griseoplana", "strain": "strain=NRRL B-3064", "accession": "GCA_001418575.1", "taxid": 66896, 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833, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces coryli", "strain": "strain=A7024", "accession": "GCA_011044975.1", "taxid": 1128680, "species_taxid": 1128680, "relation_to_type": "type", "validated": true, "ani": 77.5442, "matched_fragments": 924, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces panaciradicis", "strain": "strain=NBRC 109811", "accession": "GCA_023516615.1", "taxid": 1470261, "species_taxid": 1470261, "relation_to_type": "type", "validated": true, "ani": 77.5116, "matched_fragments": 963, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces marincola", "strain": "strain=SCSIO 64649", "accession": "GCA_020410765.1", "taxid": 2878388, "species_taxid": 2878388, "relation_to_type": "type", "validated": true, "ani": 77.193, "matched_fragments": 800, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces hoynatensis", "strain": "strain=KCTC 29097", "accession": "GCA_003626535.1", "taxid": 1141874, "species_taxid": 1141874, "relation_to_type": "type", "validated": true, "ani": 77.0316, "matched_fragments": 858, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Motilibacter rhizosphaerae", "strain": "strain=DSM 45622", "accession": "GCA_004216915.1", "taxid": 598652, "species_taxid": 598652, "relation_to_type": "type", "validated": true, "ani": 76.9502, "matched_fragments": 526, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microtetraspora malaysiensis", "strain": "strain=NBRC 100735", "accession": "GCA_001528665.1", "taxid": 161358, "species_taxid": 161358, "relation_to_type": "type", "validated": true, "ani": 76.5792, "matched_fragments": 754, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura violacea", "strain": "strain=LCR2-06", "accession": "GCA_017573465.1", "taxid": 2819934, "species_taxid": 2819934, "relation_to_type": "type", "validated": true, "ani": 76.3815, "matched_fragments": 1073, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomadura cremea", "strain": "strain=JCM 3308", "accession": "GCA_014648495.1", "taxid": 1991, "species_taxid": 1991, "relation_to_type": "type", "validated": true, "ani": 76.2594, "matched_fragments": 938, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinomyces radicidentis", "strain": "strain=CCUG 36733", "accession": "GCA_001553565.1", "taxid": 111015, "species_taxid": 111015, "relation_to_type": "type", "validated": true, "ani": 75.9748, "matched_fragments": 304, "total_fragments": 3191, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, 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